RNA–Protein interactions for RNA: ENST00000496015.5

ABCD4-217, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 1,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-217ENST00000496015 CANXP27824 592 aaKnown RBP18.13■□□□□ 0.49
ABCD4-217ENST00000496015 USPL1Q5W0Q7 1092 aa18.13■□□□□ 0.49
ABCD4-217ENST00000496015 NPM2Q86SE8 214 aaKnown RBP18.13■□□□□ 0.49
ABCD4-217ENST00000496015 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
ABCD4-217ENST00000496015 NARFQ9UHQ1 456 aa18.13■□□□□ 0.49
ABCD4-217ENST00000496015 WWC3Q9ULE0 1092 aa18.13■□□□□ 0.49
ABCD4-217ENST00000496015 ZBTB1Q9Y2K1 713 aa18.13■□□□□ 0.49
ABCD4-217ENST00000496015 COL15A1P39059 1388 aa18.13■□□□□ 0.49
ABCD4-217ENST00000496015 HEG1Q9ULI3 1381 aa18.13■□□□□ 0.49
ABCD4-217ENST00000496015 C10orf71Q711Q0 1435 aa18.13■□□□□ 0.49
ABCD4-217ENST00000496015 A0A087WZG4 1122 aa18.12■□□□□ 0.49
ABCD4-217ENST00000496015 A0A0G2JLW4 131 aa18.11■□□□□ 0.49
ABCD4-217ENST00000496015 PXDNLA1KZ92 1463 aa18.11■□□□□ 0.49
ABCD4-217ENST00000496015 RALBP1Q15311 655 aa18.1■□□□□ 0.49
ABCD4-217ENST00000496015 MCM10Q7L590 875 aa18.1■□□□□ 0.49
ABCD4-217ENST00000496015 TM4SF1P30408 202 aa18.09■□□□□ 0.49
ABCD4-217ENST00000496015 DDR1Q08345 913 aa18.09■□□□□ 0.49
ABCD4-217ENST00000496015 KIAA1551Q9HCM1 1747 aa18.09■□□□□ 0.49
ABCD4-217ENST00000496015 POLRMTO00411 1230 aaKnown RBP18.08■□□□□ 0.48
ABCD4-217ENST00000496015 DPEP1P16444 411 aa18.08■□□□□ 0.48
ABCD4-217ENST00000496015 EIF5P55010 431 aaKnown RBP18.08■□□□□ 0.48
ABCD4-217ENST00000496015 BCS1LQ9Y276 419 aa18.08■□□□□ 0.48
ABCD4-217ENST00000496015 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
ABCD4-217ENST00000496015 DDX10Q13206 875 aaKnown RBP18.07■□□□□ 0.48
ABCD4-217ENST00000496015 ZNF330Q9Y3S2 320 aaPredicted RBP18.07■□□□□ 0.48
ABCD4-217ENST00000496015 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
ABCD4-217ENST00000496015 BRCA1P38398 1863 aaKnown RBP18.06■□□□□ 0.48
ABCD4-217ENST00000496015 IL6STP40189 918 aaPredicted RBP18.06■□□□□ 0.48
ABCD4-217ENST00000496015 NFIXQ14938 502 aa18.06■□□□□ 0.48
ABCD4-217ENST00000496015 TAF7Q15545 349 aaPredicted RBP18.06■□□□□ 0.48
ABCD4-217ENST00000496015 PIM2Q9P1W9 311 aa18.06■□□□□ 0.48
ABCD4-217ENST00000496015 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
ABCD4-217ENST00000496015 KCNQ3O43525 872 aa18.05■□□□□ 0.48
ABCD4-217ENST00000496015 GIGYF1O75420 1035 aaPredicted RBP18.05■□□□□ 0.48
ABCD4-217ENST00000496015 SNRPA1P09661 255 aaKnown RBP18.05■□□□□ 0.48
ABCD4-217ENST00000496015 DCTN1Q14203 1278 aa18.05■□□□□ 0.48
ABCD4-217ENST00000496015 A1BGP04217 495 aa18.04■□□□□ 0.48
ABCD4-217ENST00000496015 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
ABCD4-217ENST00000496015 ARFGEF1Q9Y6D6 1849 aa18.03■□□□□ 0.48
ABCD4-217ENST00000496015 SERPINB2P05120 415 aa18.03■□□□□ 0.48
ABCD4-217ENST00000496015 NFE2L2Q16236 605 aa18.03■□□□□ 0.48
ABCD4-217ENST00000496015 DALRD3Q5D0E6 543 aaKnown RBP18.03■□□□□ 0.48
ABCD4-217ENST00000496015 ARHGAP27Q6ZUM4 889 aa18.03■□□□□ 0.48
ABCD4-217ENST00000496015 PLEKHF1Q96S99 279 aa18.03■□□□□ 0.48
ABCD4-217ENST00000496015 BCL2L12Q9HB09 334 aa18.03■□□□□ 0.48
ABCD4-217ENST00000496015 ATP10DQ9P241 1426 aa18.03■□□□□ 0.48
ABCD4-217ENST00000496015 KCNA3P22001 575 aa18.02■□□□□ 0.48
ABCD4-217ENST00000496015 BICDL1Q6ZP65 573 aa18.02■□□□□ 0.48
ABCD4-217ENST00000496015 GPBP1L1Q9HC44 474 aaPredicted RBP18.02■□□□□ 0.48
ABCD4-217ENST00000496015 TBC1D2BQ9UPU7 963 aa18.02■□□□□ 0.48
ABCD4-217ENST00000496015 USP16Q9Y5T5 823 aa18.02■□□□□ 0.48
ABCD4-217ENST00000496015 NRXN2Q9P2S2 1712 aa18.01■□□□□ 0.47
ABCD4-217ENST00000496015 C1QTNF8P60827 252 aa18.01■□□□□ 0.47
ABCD4-217ENST00000496015 MYBBP1AQ9BQG0 1328 aaKnown RBP18■□□□□ 0.47
ABCD4-217ENST00000496015 SCN7AQ01118 1682 aa18■□□□□ 0.47
ABCD4-217ENST00000496015 CHRNA5P30532 468 aa18■□□□□ 0.47
ABCD4-217ENST00000496015 ADCY9O60503 1353 aa18■□□□□ 0.47
ABCD4-217ENST00000496015 NPHP1O15259 732 aa17.99■□□□□ 0.47
ABCD4-217ENST00000496015 ZEB1P37275 1124 aaPredicted RBP17.99■□□□□ 0.47
ABCD4-217ENST00000496015 DZIP3Q86Y13 1208 aaKnown RBP17.99■□□□□ 0.47
ABCD4-217ENST00000496015 SETDB2Q96T68 719 aa17.99■□□□□ 0.47
ABCD4-217ENST00000496015 TBC1D9BQ66K14 1250 aa17.98■□□□□ 0.47
ABCD4-217ENST00000496015 ZNF526Q8TF50 670 aaPredicted RBP17.98■□□□□ 0.47
ABCD4-217ENST00000496015 MIS18AQ9NYP9 233 aa17.98■□□□□ 0.47
ABCD4-217ENST00000496015 PDZRN3Q9UPQ7 1066 aa17.98■□□□□ 0.47
ABCD4-217ENST00000496015 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
ABCD4-217ENST00000496015 CARMIL3Q8ND23 1372 aa17.98■□□□□ 0.47
ABCD4-217ENST00000496015 PRAMEF22A3QJZ6 481 aa17.97■□□□□ 0.47
ABCD4-217ENST00000496015 H0YIN7 160 aa17.97■□□□□ 0.47
ABCD4-217ENST00000496015 CAMTA2O94983 1202 aa17.96■□□□□ 0.47
ABCD4-217ENST00000496015 LMOD3Q0VAK6 560 aa17.96■□□□□ 0.47
ABCD4-217ENST00000496015 CLEC4GQ6UXB4 293 aa17.96■□□□□ 0.47
ABCD4-217ENST00000496015 C2CD5Q86YS7 1000 aa17.96■□□□□ 0.47
ABCD4-217ENST00000496015 LAMB4A4D0S4 1761 aa17.96■□□□□ 0.47
ABCD4-217ENST00000496015 BCORQ6W2J9 1755 aa17.96■□□□□ 0.47
ABCD4-217ENST00000496015 KDM3BQ7LBC6 1761 aa17.96■□□□□ 0.47
ABCD4-217ENST00000496015 DLEC1Q9Y238 1755 aa17.96■□□□□ 0.47
ABCD4-217ENST00000496015 PDE6BP35913 854 aa17.95■□□□□ 0.46
ABCD4-217ENST00000496015 PIP4K2AP48426 406 aaPredicted RBP17.95■□□□□ 0.46
ABCD4-217ENST00000496015 RIPK4P57078 832 aa17.95■□□□□ 0.46
ABCD4-217ENST00000496015 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
ABCD4-217ENST00000496015 BRIP1Q9BX63 1249 aa17.95■□□□□ 0.46
ABCD4-217ENST00000496015 RGL2O15211 777 aa17.94■□□□□ 0.46
ABCD4-217ENST00000496015 TTLL6Q8N841 843 aa17.94■□□□□ 0.46
ABCD4-217ENST00000496015 CNBD1Q8NA66 436 aa17.94■□□□□ 0.46
ABCD4-217ENST00000496015 THUMPD2Q9BTF0 503 aaKnown RBP17.94■□□□□ 0.46
ABCD4-217ENST00000496015 ST5P78524 1137 aa17.93■□□□□ 0.46
ABCD4-217ENST00000496015 SENP3-EIF4A1A0A087X0R7 540 aa17.92■□□□□ 0.46
ABCD4-217ENST00000496015 NBPF26B4DH59 902 aa17.92■□□□□ 0.46
ABCD4-217ENST00000496015 EIF4A1P60842 406 aaKnown RBP17.92■□□□□ 0.46
ABCD4-217ENST00000496015 C9orf131Q5VYM1 1079 aa17.92■□□□□ 0.46
ABCD4-217ENST00000496015 PRR5LQ6MZQ0 368 aa17.92■□□□□ 0.46
ABCD4-217ENST00000496015 NBPF10Q6P3W6 841 aaKnown RBP17.92■□□□□ 0.46
ABCD4-217ENST00000496015 NBPF15Q8N660 670 aa17.92■□□□□ 0.46
ABCD4-217ENST00000496015 ANKRD31Q8N7Z5 1873 aa17.91■□□□□ 0.46
ABCD4-217ENST00000496015 TMPOP42166 694 aaKnown RBP17.91■□□□□ 0.46
ABCD4-217ENST00000496015 NBPF5PQ86XG9 351 aaPredicted RBP17.91■□□□□ 0.46
ABCD4-217ENST00000496015 BABAM1Q9NWV8 329 aa17.91■□□□□ 0.46
ABCD4-217ENST00000496015 TSPYL4Q9UJ04 414 aa17.91■□□□□ 0.46
ABCD4-217ENST00000496015 SBF1O95248 1867 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms