RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 PCDH11YQ9BZA8 1340 aa13.71□□□□□ -0.21
ECHDC3-204ENST00000495787 CYP27B1O15528 508 aa13.71□□□□□ -0.21
ECHDC3-204ENST00000495787 ATF7IPQ6VMQ6 1270 aa13.71□□□□□ -0.21
ECHDC3-204ENST00000495787 DZIP1LQ8IYY4 767 aaKnown RBP13.71□□□□□ -0.21
ECHDC3-204ENST00000495787 PANK1Q8TE04 598 aa13.71□□□□□ -0.21
ECHDC3-204ENST00000495787 DCAF5Q96JK2 942 aa13.71□□□□□ -0.21
ECHDC3-204ENST00000495787 KDM6AO15550 1401 aaPredicted RBP13.71□□□□□ -0.22
ECHDC3-204ENST00000495787 MRC1P22897 1456 aa13.7□□□□□ -0.22
ECHDC3-204ENST00000495787 BTBD11A6QL63 1104 aa13.7□□□□□ -0.22
ECHDC3-204ENST00000495787 AAMPQ13685 434 aa13.7□□□□□ -0.22
ECHDC3-204ENST00000495787 GPR162Q16538 588 aa13.7□□□□□ -0.22
ECHDC3-204ENST00000495787 IFFO2Q5TF58 517 aa13.7□□□□□ -0.22
ECHDC3-204ENST00000495787 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
ECHDC3-204ENST00000495787 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
ECHDC3-204ENST00000495787 PAPPAQ13219 1627 aa13.69□□□□□ -0.22
ECHDC3-204ENST00000495787 GIGYF1O75420 1035 aaPredicted RBP13.69□□□□□ -0.22
ECHDC3-204ENST00000495787 RLBP1P12271 317 aa13.69□□□□□ -0.22
ECHDC3-204ENST00000495787 TRIM27P14373 513 aa13.69□□□□□ -0.22
ECHDC3-204ENST00000495787 EIF4A1P60842 406 aaKnown RBP13.69□□□□□ -0.22
ECHDC3-204ENST00000495787 FTSJ3Q8IY81 847 aaKnown RBP13.69□□□□□ -0.22
ECHDC3-204ENST00000495787 SLC52A2Q9HAB3 445 aa13.69□□□□□ -0.22
ECHDC3-204ENST00000495787 TNNQ9UQP3 1299 aa13.69□□□□□ -0.22
ECHDC3-204ENST00000495787 COG6Q9Y2V7 657 aa13.69□□□□□ -0.22
ECHDC3-204ENST00000495787 HOXB7P09629 217 aa13.68□□□□□ -0.22
ECHDC3-204ENST00000495787 NKX1-1Q15270 411 aaPredicted RBP13.68□□□□□ -0.22
ECHDC3-204ENST00000495787 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
ECHDC3-204ENST00000495787 CHMP4AQ9BY43 222 aa13.68□□□□□ -0.22
ECHDC3-204ENST00000495787 TCERG1O14776 1098 aaKnown RBP13.67□□□□□ -0.22
ECHDC3-204ENST00000495787 MVPQ14764 893 aaKnown RBP13.67□□□□□ -0.22
ECHDC3-204ENST00000495787 CCDC30Q5VVM6 783 aa13.67□□□□□ -0.22
ECHDC3-204ENST00000495787 API5Q9BZZ5 524 aaKnown RBP13.67□□□□□ -0.22
ECHDC3-204ENST00000495787 KCNQ3O43525 872 aa13.66□□□□□ -0.22
ECHDC3-204ENST00000495787 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
ECHDC3-204ENST00000495787 PTPRCP08575 1304 aa13.65□□□□□ -0.22
ECHDC3-204ENST00000495787 ERVV-2B6SEH9 535 aa13.65□□□□□ -0.22
ECHDC3-204ENST00000495787 POLD1P28340 1107 aa13.65□□□□□ -0.22
ECHDC3-204ENST00000495787 ZNF827Q17R98 1081 aa13.65□□□□□ -0.22
ECHDC3-204ENST00000495787 SLC16A10Q8TF71 515 aa13.65□□□□□ -0.22
ECHDC3-204ENST00000495787 STK31Q9BXU1 1019 aa13.65□□□□□ -0.22
ECHDC3-204ENST00000495787 DDX19BQ9UMR2 479 aa13.65□□□□□ -0.22
ECHDC3-204ENST00000495787 HEG1Q9ULI3 1381 aa13.65□□□□□ -0.22
ECHDC3-204ENST00000495787 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
ECHDC3-204ENST00000495787 CABP4P57796 275 aa13.64□□□□□ -0.23
ECHDC3-204ENST00000495787 KLHL34Q8N239 644 aa13.64□□□□□ -0.23
ECHDC3-204ENST00000495787 TMEM57Q8N5G2 664 aa13.64□□□□□ -0.23
ECHDC3-204ENST00000495787 NFATC2IPQ8NCF5 419 aa13.64□□□□□ -0.23
ECHDC3-204ENST00000495787 ABCC4O15439 1325 aa13.64□□□□□ -0.23
ECHDC3-204ENST00000495787 BTAF1O14981 1849 aa13.63□□□□□ -0.23
ECHDC3-204ENST00000495787 HDGFL1Q5TGJ6 251 aa13.63□□□□□ -0.23
ECHDC3-204ENST00000495787 ZNF790Q6PG37 636 aa13.63□□□□□ -0.23
ECHDC3-204ENST00000495787 DDX54Q8TDD1 881 aaKnown RBP13.63□□□□□ -0.23
ECHDC3-204ENST00000495787 LRRC4BQ9NT99 713 aa13.63□□□□□ -0.23
ECHDC3-204ENST00000495787 GOLGB1Q14789 3259 aaKnown RBP13.63□□□□□ -0.23
ECHDC3-204ENST00000495787 CEP350Q5VT06 3117 aa13.62□□□□□ -0.23
ECHDC3-204ENST00000495787 SLC27A3Q5K4L6 730 aa13.62□□□□□ -0.23
ECHDC3-204ENST00000495787 ITPRIPQ8IWB1 547 aa13.62□□□□□ -0.23
ECHDC3-204ENST00000495787 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
ECHDC3-204ENST00000495787 CHMP4BQ9H444 224 aaKnown RBP13.62□□□□□ -0.23
ECHDC3-204ENST00000495787 TOGARAM1Q9Y4F4 1720 aa13.61□□□□□ -0.23
ECHDC3-204ENST00000495787 SLC39A6Q13433 755 aa13.6□□□□□ -0.23
ECHDC3-204ENST00000495787 QSER1Q2KHR3 1735 aa13.6□□□□□ -0.23
ECHDC3-204ENST00000495787 G2E3Q7L622 706 aa13.6□□□□□ -0.23
ECHDC3-204ENST00000495787 TTC5Q8N0Z6 440 aa13.6□□□□□ -0.23
ECHDC3-204ENST00000495787 UBR2Q8IWV8 1755 aa13.6□□□□□ -0.23
ECHDC3-204ENST00000495787 ITGB4P16144 1822 aa13.6□□□□□ -0.23
ECHDC3-204ENST00000495787 C5P01031 1676 aa13.59□□□□□ -0.23
ECHDC3-204ENST00000495787 COL24A1Q17RW2 1714 aa13.59□□□□□ -0.23
ECHDC3-204ENST00000495787 GRIN3BO60391 1043 aa13.59□□□□□ -0.23
ECHDC3-204ENST00000495787 EIF2S2P20042 333 aaKnown RBP13.59□□□□□ -0.23
ECHDC3-204ENST00000495787 INTS3Q68E01 1043 aaKnown RBP13.59□□□□□ -0.23
ECHDC3-204ENST00000495787 CENPQQ7L2Z9 268 aaPredicted RBP13.59□□□□□ -0.23
ECHDC3-204ENST00000495787 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
ECHDC3-204ENST00000495787 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
ECHDC3-204ENST00000495787 PNPLA7Q6ZV29 1317 aa13.59□□□□□ -0.23
ECHDC3-204ENST00000495787 KDM2BQ8NHM5 1336 aa13.59□□□□□ -0.23
ECHDC3-204ENST00000495787 N4BP2Q86UW6 1770 aaPredicted RBP13.58□□□□□ -0.23
ECHDC3-204ENST00000495787 FLIIQ13045 1269 aa13.58□□□□□ -0.24
ECHDC3-204ENST00000495787 NLGN2Q8NFZ4 835 aa13.58□□□□□ -0.24
ECHDC3-204ENST00000495787 ZBTB40Q9NUA8 1239 aa13.58□□□□□ -0.24
ECHDC3-204ENST00000495787 TFCP2L1Q9NZI6 479 aa13.58□□□□□ -0.24
ECHDC3-204ENST00000495787 LAMB4A4D0S4 1761 aa13.58□□□□□ -0.24
ECHDC3-204ENST00000495787 KAT6BQ8WYB5 2073 aa13.57□□□□□ -0.24
ECHDC3-204ENST00000495787 ZBTB7BO15156 539 aaPredicted RBP13.57□□□□□ -0.24
ECHDC3-204ENST00000495787 SNRPA1P09661 255 aaKnown RBP13.57□□□□□ -0.24
ECHDC3-204ENST00000495787 ZNF496Q96IT1 587 aaPredicted RBP13.57□□□□□ -0.24
ECHDC3-204ENST00000495787 DBF4Q9UBU7 674 aaPredicted RBP13.57□□□□□ -0.24
ECHDC3-204ENST00000495787 FKBP5Q13451 457 aaPredicted RBP13.56□□□□□ -0.24
ECHDC3-204ENST00000495787 TMOD3Q9NYL9 352 aa13.56□□□□□ -0.24
ECHDC3-204ENST00000495787 CHPF2Q9P2E5 772 aa13.56□□□□□ -0.24
ECHDC3-204ENST00000495787 PCDHB15Q9Y5E8 787 aa13.56□□□□□ -0.24
ECHDC3-204ENST00000495787 PXDNLA1KZ92 1463 aa13.55□□□□□ -0.24
ECHDC3-204ENST00000495787 KCPQ6ZWJ8 1503 aa13.55□□□□□ -0.24
ECHDC3-204ENST00000495787 PRAMEF22A3QJZ6 481 aa13.55□□□□□ -0.24
ECHDC3-204ENST00000495787 YBX3P16989 372 aaKnown RBP eCLIP13.55□□□□□ -0.24
ECHDC3-204ENST00000495787 CCT4P50991 539 aaKnown RBP13.55□□□□□ -0.24
ECHDC3-204ENST00000495787 RWDD1Q9H446 243 aaPredicted RBP13.55□□□□□ -0.24
ECHDC3-204ENST00000495787 DOT1LQ8TEK3 1739 aa13.54□□□□□ -0.24
ECHDC3-204ENST00000495787 IGHDP01880 384 aa13.54□□□□□ -0.24
ECHDC3-204ENST00000495787 SYTL4Q96C24 671 aaPredicted RBP13.54□□□□□ -0.24
ECHDC3-204ENST00000495787 PHAXQ9H814 394 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms