RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 TTC22Q5TAA0 569 aa11.13□□□□□ -0.63
TM9SF4-207ENST00000495749 CCDC9Q9Y3X0 531 aaKnown RBP11.13□□□□□ -0.63
TM9SF4-207ENST00000495749 DTNBO60941 627 aa11.13□□□□□ -0.63
TM9SF4-207ENST00000495749 RABEP1Q15276 862 aa11.13□□□□□ -0.63
TM9SF4-207ENST00000495749 DDX54Q8TDD1 881 aaKnown RBP11.13□□□□□ -0.63
TM9SF4-207ENST00000495749 MAP3K2Q9Y2U5 619 aa11.13□□□□□ -0.63
TM9SF4-207ENST00000495749 NRKQ7Z2Y5 1582 aa11.12□□□□□ -0.63
TM9SF4-207ENST00000495749 HTATSF1O43719 755 aaKnown RBP11.12□□□□□ -0.63
TM9SF4-207ENST00000495749 NCLP19338 710 aaKnown RBP11.12□□□□□ -0.63
TM9SF4-207ENST00000495749 C9orf78Q9NZ63 289 aaPredicted RBP11.12□□□□□ -0.63
TM9SF4-207ENST00000495749 PA2G4Q9UQ80 394 aaKnown RBP11.12□□□□□ -0.63
TM9SF4-207ENST00000495749 MCTP1Q6DN14 999 aa11.12□□□□□ -0.63
TM9SF4-207ENST00000495749 USP26Q9BXU7 913 aa11.12□□□□□ -0.63
TM9SF4-207ENST00000495749 ATP10DQ9P241 1426 aa11.12□□□□□ -0.63
TM9SF4-207ENST00000495749 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
TM9SF4-207ENST00000495749 GNAI3P08754 354 aa11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 NASPP49321 788 aaPredicted RBP11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 PKP1Q13835 747 aa11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 DNAAF4Q8WXU2 420 aa11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 KLHL40Q2TBA0 621 aa11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 FOXD4L5Q5VV16 416 aaPredicted RBP11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 UNC5CLQ8IV45 518 aa11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 KLHDC4Q8TBB5 520 aa11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 FOXD4L4Q8WXT5 416 aaPredicted RBP11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 SIL1Q9H173 461 aa11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 ERBB3P21860 1342 aa11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 ZNF335Q9H4Z2 1342 aaPredicted RBP11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 PTCD1O75127 700 aaKnown RBP11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 PDE1AP54750 535 aa11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 LRRCC1Q9C099 1032 aa11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 PRDM11Q9NQV5 511 aa11.11□□□□□ -0.63
TM9SF4-207ENST00000495749 GIGYF1O75420 1035 aaPredicted RBP11.1□□□□□ -0.63
TM9SF4-207ENST00000495749 USP16Q9Y5T5 823 aa11.1□□□□□ -0.63
TM9SF4-207ENST00000495749 C1orf167Q5SNV9 1468 aa11.1□□□□□ -0.63
TM9SF4-207ENST00000495749 XRN1Q8IZH2 1706 aaKnown RBP11.1□□□□□ -0.63
TM9SF4-207ENST00000495749 TATP17735 454 aaPredicted RBP11.1□□□□□ -0.63
TM9SF4-207ENST00000495749 ATP8B2P98198 1209 aa11.1□□□□□ -0.63
TM9SF4-207ENST00000495749 TOM1L2Q6ZVM7 507 aa11.1□□□□□ -0.63
TM9SF4-207ENST00000495749 PXDNQ92626 1479 aa11.1□□□□□ -0.63
TM9SF4-207ENST00000495749 AMOTQ4VCS5 1084 aa11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 CAVIN1Q6NZI2 390 aaKnown RBP11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 CLEC17AQ6ZS10 378 aa11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 ZNF496Q96IT1 587 aaPredicted RBP11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 NALCNQ8IZF0 1738 aa11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 ATP5J2-PTCD1G3V325 749 aa11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 NUCB2P80303 420 aa11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 ZGPATQ8N5A5 531 aaKnown RBP11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 ANP32BQ92688 251 aaKnown RBP11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 CASC1Q6TDU7 716 aa11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 RIC3Q7Z5B4 369 aa11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 CADPS2Q86UW7 1296 aa11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 LARP6Q9BRS8 491 aaKnown RBP11.09□□□□□ -0.63
TM9SF4-207ENST00000495749 ANO2Q9NQ90 1003 aa11.08□□□□□ -0.64
TM9SF4-207ENST00000495749 SOS1Q07889 1333 aaPredicted RBP11.08□□□□□ -0.64
TM9SF4-207ENST00000495749 NWD1Q149M9 1564 aa11.08□□□□□ -0.64
TM9SF4-207ENST00000495749 CYP27B1O15528 508 aa11.08□□□□□ -0.64
TM9SF4-207ENST00000495749 MX1P20591 662 aa11.08□□□□□ -0.64
TM9SF4-207ENST00000495749 CCDC173Q0VFZ6 552 aa11.08□□□□□ -0.64
TM9SF4-207ENST00000495749 BEND3Q5T5X7 828 aa11.08□□□□□ -0.64
TM9SF4-207ENST00000495749 COPS6Q7L5N1 327 aa11.08□□□□□ -0.64
TM9SF4-207ENST00000495749 DBF4Q9UBU7 674 aaPredicted RBP11.08□□□□□ -0.64
TM9SF4-207ENST00000495749 KIF24Q5T7B8 1368 aa11.08□□□□□ -0.64
TM9SF4-207ENST00000495749 ST18O60284 1047 aa11.07□□□□□ -0.64
TM9SF4-207ENST00000495749 ZNF790Q6PG37 636 aa11.07□□□□□ -0.64
TM9SF4-207ENST00000495749 FOXD4L6Q3SYB3 417 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-207ENST00000495749 FOXD4L3Q6VB84 417 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-207ENST00000495749 XAGE3Q8WTP9 111 aa11.07□□□□□ -0.64
TM9SF4-207ENST00000495749 CHAMP1Q96JM3 812 aa11.07□□□□□ -0.64
TM9SF4-207ENST00000495749 LMBRD1Q9NUN5 540 aa11.07□□□□□ -0.64
TM9SF4-207ENST00000495749 PRPF40AO75400 957 aaKnown RBP11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 BRINP3Q76B58 766 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 TTC5Q8N0Z6 440 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 CEMIPQ8WUJ3 1361 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 CYP2E1P05181 493 aaPredicted RBP11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 CABP4P57796 275 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 EVA1CP58658 441 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 FMN2Q9NZ56 1722 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 NPHP3Q7Z494 1330 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 REC8O95072 547 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 PHKG2P15735 406 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 ZSCAN23Q3MJ62 389 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 PPP1R9BQ96SB3 815 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 MYD88Q99836 296 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 IL25Q9H293 177 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 SLAIN2Q9P270 581 aa11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.06□□□□□ -0.64
TM9SF4-207ENST00000495749 HSP90AA2PQ14568 343 aaPredicted RBP11.05□□□□□ -0.64
TM9SF4-207ENST00000495749 UPF3BQ9BZI7 483 aaKnown RBP11.05□□□□□ -0.64
TM9SF4-207ENST00000495749 CHMP3Q9Y3E7 222 aa11.05□□□□□ -0.64
TM9SF4-207ENST00000495749 RHPN1Q8TCX5 695 aa11.05□□□□□ -0.64
TM9SF4-207ENST00000495749 CCDC8Q9H0W5 538 aaPredicted RBP11.05□□□□□ -0.64
TM9SF4-207ENST00000495749 CWC22Q9HCG8 908 aaKnown RBP11.05□□□□□ -0.64
TM9SF4-207ENST00000495749 RBM27Q9P2N5 1060 aaKnown RBP11.05□□□□□ -0.64
TM9SF4-207ENST00000495749 SPG7Q9UQ90 795 aa11.05□□□□□ -0.64
TM9SF4-207ENST00000495749 IBTKQ9P2D0 1353 aaPredicted RBP11.05□□□□□ -0.64
TM9SF4-207ENST00000495749 ERC2O15083 957 aa11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 CCDC85AQ96PX6 553 aaPredicted RBP11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 ZDHHC9Q9Y397 364 aa11.04□□□□□ -0.64
TM9SF4-207ENST00000495749 NDUFB9Q9Y6M9 179 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms