RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 NARFQ9UHQ1 456 aa19.89■□□□□ 0.77
PTPN18-216ENST00000495400 COL15A1P39059 1388 aa19.88■□□□□ 0.77
PTPN18-216ENST00000495400 U2SURPO15042 1029 aaKnown RBP19.88■□□□□ 0.77
PTPN18-216ENST00000495400 DALRD3Q5D0E6 543 aaKnown RBP19.88■□□□□ 0.77
PTPN18-216ENST00000495400 ZBTB1Q9Y2K1 713 aa19.88■□□□□ 0.77
PTPN18-216ENST00000495400 AFDNP55196 1824 aaKnown RBP19.88■□□□□ 0.77
PTPN18-216ENST00000495400 TTC5Q8N0Z6 440 aa19.87■□□□□ 0.77
PTPN18-216ENST00000495400 CHRNA5P30532 468 aa19.86■□□□□ 0.77
PTPN18-216ENST00000495400 GAS2L2Q8NHY3 880 aa19.86■□□□□ 0.77
PTPN18-216ENST00000495400 GNAT3A8MTJ3 354 aa19.85■□□□□ 0.77
PTPN18-216ENST00000495400 TEFQ10587 303 aa19.85■□□□□ 0.77
PTPN18-216ENST00000495400 NFIXQ14938 502 aa19.85■□□□□ 0.77
PTPN18-216ENST00000495400 C9orf131Q5VYM1 1079 aa19.85■□□□□ 0.77
PTPN18-216ENST00000495400 NRXN2Q9P2S2 1712 aa19.85■□□□□ 0.77
PTPN18-216ENST00000495400 STARD3NLO95772 234 aa19.84■□□□□ 0.77
PTPN18-216ENST00000495400 CANXP27824 592 aaKnown RBP19.84■□□□□ 0.77
PTPN18-216ENST00000495400 IL17REQ8NFR9 667 aa19.84■□□□□ 0.77
PTPN18-216ENST00000495400 SIPA1L3O60292 1781 aaPredicted RBP19.83■□□□□ 0.77
PTPN18-216ENST00000495400 BCL2L12Q9HB09 334 aa19.83■□□□□ 0.77
PTPN18-216ENST00000495400 SBF1O95248 1867 aa19.82■□□□□ 0.76
PTPN18-216ENST00000495400 SERPINB2P05120 415 aa19.82■□□□□ 0.76
PTPN18-216ENST00000495400 ZNF790Q6PG37 636 aa19.82■□□□□ 0.76
PTPN18-216ENST00000495400 TEX13AQ9BXU3 409 aaPredicted RBP19.82■□□□□ 0.76
PTPN18-216ENST00000495400 A0A087WZG4 1122 aa19.81■□□□□ 0.76
PTPN18-216ENST00000495400 TOMM70O94826 608 aa19.81■□□□□ 0.76
PTPN18-216ENST00000495400 EIF5P55010 431 aaKnown RBP19.81■□□□□ 0.76
PTPN18-216ENST00000495400 ZNF496Q96IT1 587 aaPredicted RBP19.81■□□□□ 0.76
PTPN18-216ENST00000495400 CFAP53Q96M91 514 aa19.81■□□□□ 0.76
PTPN18-216ENST00000495400 HEG1Q9ULI3 1381 aa19.81■□□□□ 0.76
PTPN18-216ENST00000495400 CEP350Q5VT06 3117 aa19.8■□□□□ 0.76
PTPN18-216ENST00000495400 NMRK2Q9NPI5 230 aa19.8■□□□□ 0.76
PTPN18-216ENST00000495400 RNF181Q9P0P0 153 aa19.79■□□□□ 0.76
PTPN18-216ENST00000495400 DLEC1Q9Y238 1755 aa19.79■□□□□ 0.76
PTPN18-216ENST00000495400 PRKAR2BP31323 418 aa19.78■□□□□ 0.76
PTPN18-216ENST00000495400 PHACTR3Q96KR7 559 aa19.78■□□□□ 0.76
PTPN18-216ENST00000495400 NUDCQ9Y266 331 aa19.78■□□□□ 0.76
PTPN18-216ENST00000495400 CEMIPQ8WUJ3 1361 aa19.78■□□□□ 0.76
PTPN18-216ENST00000495400 BICDL1Q6ZP65 573 aa19.77■□□□□ 0.76
PTPN18-216ENST00000495400 FMNL2Q96PY5 1086 aa19.77■□□□□ 0.76
PTPN18-216ENST00000495400 RSPH6AQ9H0K4 717 aa19.77■□□□□ 0.76
PTPN18-216ENST00000495400 KDM2BQ8NHM5 1336 aa19.76■□□□□ 0.75
PTPN18-216ENST00000495400 H0YIN7 160 aa19.75■□□□□ 0.75
PTPN18-216ENST00000495400 IL6STP40189 918 aaPredicted RBP19.75■□□□□ 0.75
PTPN18-216ENST00000495400 APLP1P51693 650 aa19.75■□□□□ 0.75
PTPN18-216ENST00000495400 C2CD5Q86YS7 1000 aa19.75■□□□□ 0.75
PTPN18-216ENST00000495400 TTLL6Q8N841 843 aa19.75■□□□□ 0.75
PTPN18-216ENST00000495400 ZNF330Q9Y3S2 320 aaPredicted RBP19.75■□□□□ 0.75
PTPN18-216ENST00000495400 SCN7AQ01118 1682 aa19.75■□□□□ 0.75
PTPN18-216ENST00000495400 BTBD11A6QL63 1104 aa19.74■□□□□ 0.75
PTPN18-216ENST00000495400 TBC1D9BQ66K14 1250 aa19.74■□□□□ 0.75
PTPN18-216ENST00000495400 C16orf71Q8IYS4 520 aaPredicted RBP19.74■□□□□ 0.75
PTPN18-216ENST00000495400 RBM46Q8TBY0 533 aaKnown RBP19.74■□□□□ 0.75
PTPN18-216ENST00000495400 TBC1D2BQ9UPU7 963 aa19.74■□□□□ 0.75
PTPN18-216ENST00000495400 CCDC88AQ3V6T2 1871 aa19.73■□□□□ 0.75
PTPN18-216ENST00000495400 CARMIL3Q8ND23 1372 aa19.73■□□□□ 0.75
PTPN18-216ENST00000495400 KCNQ3O43525 872 aa19.73■□□□□ 0.75
PTPN18-216ENST00000495400 A1BGP04217 495 aa19.73■□□□□ 0.75
PTPN18-216ENST00000495400 PPP2R1AP30153 589 aa19.73■□□□□ 0.75
PTPN18-216ENST00000495400 RASSF7Q02833 373 aa19.73■□□□□ 0.75
PTPN18-216ENST00000495400 NPM2Q86SE8 214 aaKnown RBP19.73■□□□□ 0.75
PTPN18-216ENST00000495400 ANKRD31Q8N7Z5 1873 aa19.73■□□□□ 0.75
PTPN18-216ENST00000495400 U2AF1L5P0DN76 240 aaPredicted RBP19.72■□□□□ 0.75
PTPN18-216ENST00000495400 U2AF1Q01081 240 aaKnown RBP eCLIP19.72■□□□□ 0.75
PTPN18-216ENST00000495400 TNRC6CQ9HCJ0 1690 aaKnown RBP19.71■□□□□ 0.75
PTPN18-216ENST00000495400 RTF1Q92541 710 aaKnown RBP19.71■□□□□ 0.75
PTPN18-216ENST00000495400 RRAGCQ9HB90 399 aa19.71■□□□□ 0.75
PTPN18-216ENST00000495400 PDZRN3Q9UPQ7 1066 aa19.71■□□□□ 0.75
PTPN18-216ENST00000495400 ZC3H4Q9UPT8 1303 aaKnown RBP19.71■□□□□ 0.75
PTPN18-216ENST00000495400 LMNB1P20700 586 aa19.7■□□□□ 0.74
PTPN18-216ENST00000495400 PDE6BP35913 854 aa19.7■□□□□ 0.74
PTPN18-216ENST00000495400 BRIP1Q9BX63 1249 aa19.7■□□□□ 0.74
PTPN18-216ENST00000495400 CAMTA2O94983 1202 aa19.69■□□□□ 0.74
PTPN18-216ENST00000495400 PRR5LQ6MZQ0 368 aa19.69■□□□□ 0.74
PTPN18-216ENST00000495400 ZNF622Q969S3 477 aaKnown RBP eCLIP19.69■□□□□ 0.74
PTPN18-216ENST00000495400 USP16Q9Y5T5 823 aa19.69■□□□□ 0.74
PTPN18-216ENST00000495400 BCORQ6W2J9 1755 aa19.68■□□□□ 0.74
PTPN18-216ENST00000495400 FSTL1Q12841 308 aa19.68■□□□□ 0.74
PTPN18-216ENST00000495400 MCM10Q7L590 875 aa19.68■□□□□ 0.74
PTPN18-216ENST00000495400 DZIP3Q86Y13 1208 aaKnown RBP19.68■□□□□ 0.74
PTPN18-216ENST00000495400 SETDB2Q96T68 719 aa19.68■□□□□ 0.74
PTPN18-216ENST00000495400 HTATSF1O43719 755 aaKnown RBP19.67■□□□□ 0.74
PTPN18-216ENST00000495400 PRELPP51888 382 aa19.67■□□□□ 0.74
PTPN18-216ENST00000495400 CCDC24Q8N4L8 307 aa19.67■□□□□ 0.74
PTPN18-216ENST00000495400 WDR90Q96KV7 1748 aa19.67■□□□□ 0.74
PTPN18-216ENST00000495400 COL11A2P13942 1736 aaPredicted RBP19.66■□□□□ 0.74
PTPN18-216ENST00000495400 GLTPD2A6NH11 291 aa19.66■□□□□ 0.74
PTPN18-216ENST00000495400 NFKBIEO00221 500 aa19.66■□□□□ 0.74
PTPN18-216ENST00000495400 SNRPA1P09661 255 aaKnown RBP19.66■□□□□ 0.74
PTPN18-216ENST00000495400 IFFO2Q5TF58 517 aa19.66■□□□□ 0.74
PTPN18-216ENST00000495400 DNAJC5GQ8N7S2 189 aa19.66■□□□□ 0.74
PTPN18-216ENST00000495400 TIAM2Q8IVF5 1701 aa19.65■□□□□ 0.74
PTPN18-216ENST00000495400 PRAMEF22A3QJZ6 481 aa19.65■□□□□ 0.74
PTPN18-216ENST00000495400 NPHP1O15259 732 aa19.65■□□□□ 0.74
PTPN18-216ENST00000495400 CNBD1Q8NA66 436 aa19.65■□□□□ 0.74
PTPN18-216ENST00000495400 PIP4K2AP48426 406 aaPredicted RBP19.64■□□□□ 0.73
PTPN18-216ENST00000495400 ST5P78524 1137 aa19.64■□□□□ 0.73
PTPN18-216ENST00000495400 DCTN1Q14203 1278 aa19.64■□□□□ 0.73
PTPN18-216ENST00000495400 CLEC4GQ6UXB4 293 aa19.64■□□□□ 0.73
PTPN18-216ENST00000495400 FER1L6Q2WGJ9 1857 aa19.64■□□□□ 0.73
PTPN18-216ENST00000495400 DICER1Q9UPY3 1922 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms