RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 POLRMTO00411 1230 aaKnown RBP24.27■■□□□ 1.48
YIPF4-204ENST00000495355 GIGYF1O75420 1035 aaPredicted RBP24.27■■□□□ 1.48
YIPF4-204ENST00000495355 PRKAR2BP31323 418 aa24.27■■□□□ 1.48
YIPF4-204ENST00000495355 USPL1Q5W0Q7 1092 aa24.27■■□□□ 1.48
YIPF4-204ENST00000495355 NRXN2Q9P2S2 1712 aa24.27■■□□□ 1.48
YIPF4-204ENST00000495355 AFDNP55196 1824 aaKnown RBP24.26■■□□□ 1.47
YIPF4-204ENST00000495355 ZNF496Q96IT1 587 aaPredicted RBP24.26■■□□□ 1.47
YIPF4-204ENST00000495355 ARFGEF1Q9Y6D6 1849 aa24.25■■□□□ 1.47
YIPF4-204ENST00000495355 ZNF790Q6PG37 636 aa24.24■■□□□ 1.47
YIPF4-204ENST00000495355 BCS1LQ9Y276 419 aa24.24■■□□□ 1.47
YIPF4-204ENST00000495355 NARFQ9UHQ1 456 aa24.23■■□□□ 1.47
YIPF4-204ENST00000495355 HEG1Q9ULI3 1381 aa24.23■■□□□ 1.47
YIPF4-204ENST00000495355 KCNQ3O43525 872 aa24.22■■□□□ 1.47
YIPF4-204ENST00000495355 CFAP53Q96M91 514 aa24.22■■□□□ 1.47
YIPF4-204ENST00000495355 TEFQ10587 303 aa24.21■■□□□ 1.47
YIPF4-204ENST00000495355 NFIXQ14938 502 aa24.21■■□□□ 1.47
YIPF4-204ENST00000495355 SCN7AQ01118 1682 aa24.21■■□□□ 1.47
YIPF4-204ENST00000495355 ZPR1O75312 459 aa24.2■■□□□ 1.46
YIPF4-204ENST00000495355 CANXP27824 592 aaKnown RBP24.2■■□□□ 1.46
YIPF4-204ENST00000495355 EIF5P55010 431 aaKnown RBP24.2■■□□□ 1.46
YIPF4-204ENST00000495355 TTC5Q8N0Z6 440 aa24.2■■□□□ 1.46
YIPF4-204ENST00000495355 SENP3-EIF4A1A0A087X0R7 540 aa24.19■■□□□ 1.46
YIPF4-204ENST00000495355 CHRNA5P30532 468 aa24.19■■□□□ 1.46
YIPF4-204ENST00000495355 ZNF526Q8TF50 670 aaPredicted RBP24.19■■□□□ 1.46
YIPF4-204ENST00000495355 FCHSD2O94868 740 aa24.18■■□□□ 1.46
YIPF4-204ENST00000495355 U2AF1L5P0DN76 240 aaPredicted RBP24.18■■□□□ 1.46
YIPF4-204ENST00000495355 U2AF1Q01081 240 aaKnown RBP eCLIP24.18■■□□□ 1.46
YIPF4-204ENST00000495355 GPBP1L1Q9HC44 474 aaPredicted RBP24.18■■□□□ 1.46
YIPF4-204ENST00000495355 CARMIL3Q8ND23 1372 aa24.16■■□□□ 1.46
YIPF4-204ENST00000495355 DLEC1Q9Y238 1755 aa24.16■■□□□ 1.46
YIPF4-204ENST00000495355 NUDCQ9Y266 331 aa24.16■■□□□ 1.46
YIPF4-204ENST00000495355 STARD3NLO95772 234 aa24.15■■□□□ 1.46
YIPF4-204ENST00000495355 PIM2Q9P1W9 311 aa24.15■■□□□ 1.46
YIPF4-204ENST00000495355 ARHGAP27Q6ZUM4 889 aa24.14■■□□□ 1.45
YIPF4-204ENST00000495355 MCM10Q7L590 875 aa24.14■■□□□ 1.45
YIPF4-204ENST00000495355 FMNL2Q96PY5 1086 aa24.14■■□□□ 1.45
YIPF4-204ENST00000495355 ANKRD31Q8N7Z5 1873 aa24.13■■□□□ 1.45
YIPF4-204ENST00000495355 PRAMEF22A3QJZ6 481 aa24.13■■□□□ 1.45
YIPF4-204ENST00000495355 BTBD11A6QL63 1104 aa24.13■■□□□ 1.45
YIPF4-204ENST00000495355 A1BGP04217 495 aa24.13■■□□□ 1.45
YIPF4-204ENST00000495355 DCTN1Q14203 1278 aa24.13■■□□□ 1.45
YIPF4-204ENST00000495355 BCORQ6W2J9 1755 aa24.13■■□□□ 1.45
YIPF4-204ENST00000495355 KIF3CO14782 793 aa24.12■■□□□ 1.45
YIPF4-204ENST00000495355 SERPINB2P05120 415 aa24.12■■□□□ 1.45
YIPF4-204ENST00000495355 CEP350Q5VT06 3117 aa24.12■■□□□ 1.45
YIPF4-204ENST00000495355 DLG5Q8TDM6 1919 aa24.12■■□□□ 1.45
YIPF4-204ENST00000495355 DALRD3Q5D0E6 543 aaKnown RBP24.11■■□□□ 1.45
YIPF4-204ENST00000495355 TEX13AQ9BXU3 409 aaPredicted RBP24.11■■□□□ 1.45
YIPF4-204ENST00000495355 IL6STP40189 918 aaPredicted RBP24.1■■□□□ 1.45
YIPF4-204ENST00000495355 TBC1D9BQ66K14 1250 aa24.1■■□□□ 1.45
YIPF4-204ENST00000495355 USP16Q9Y5T5 823 aa24.1■■□□□ 1.45
YIPF4-204ENST00000495355 SBF1O95248 1867 aa24.1■■□□□ 1.45
YIPF4-204ENST00000495355 TBC1D2BQ9UPU7 963 aa24.09■■□□□ 1.45
YIPF4-204ENST00000495355 COL11A2P13942 1736 aaPredicted RBP24.09■■□□□ 1.45
YIPF4-204ENST00000495355 PIP4K2AP48426 406 aaPredicted RBP24.08■■□□□ 1.45
YIPF4-204ENST00000495355 BICDL1Q6ZP65 573 aa24.08■■□□□ 1.45
YIPF4-204ENST00000495355 A0A087WZG4 1122 aa24.07■■□□□ 1.44
YIPF4-204ENST00000495355 CAMTA2O94983 1202 aa24.07■■□□□ 1.44
YIPF4-204ENST00000495355 PLEKHF1Q96S99 279 aa24.07■■□□□ 1.44
YIPF4-204ENST00000495355 C9orf131Q5VYM1 1079 aa24.06■■□□□ 1.44
YIPF4-204ENST00000495355 ZNF330Q9Y3S2 320 aaPredicted RBP24.06■■□□□ 1.44
YIPF4-204ENST00000495355 KDM3BQ7LBC6 1761 aa24.06■■□□□ 1.44
YIPF4-204ENST00000495355 HTATSF1O43719 755 aaKnown RBP24.05■■□□□ 1.44
YIPF4-204ENST00000495355 PRELPP51888 382 aa24.05■■□□□ 1.44
YIPF4-204ENST00000495355 RTF1Q92541 710 aaKnown RBP24.05■■□□□ 1.44
YIPF4-204ENST00000495355 PRR5LQ6MZQ0 368 aa24.03■■□□□ 1.44
YIPF4-204ENST00000495355 CCDC24Q8N4L8 307 aa24.03■■□□□ 1.44
YIPF4-204ENST00000495355 LAMB4A4D0S4 1761 aa24.03■■□□□ 1.44
YIPF4-204ENST00000495355 NBPF26B4DH59 902 aa24.02■■□□□ 1.44
YIPF4-204ENST00000495355 RASSF7Q02833 373 aa24.02■■□□□ 1.44
YIPF4-204ENST00000495355 NBPF10Q6P3W6 841 aaKnown RBP24.02■■□□□ 1.44
YIPF4-204ENST00000495355 NBPF15Q8N660 670 aa24.02■■□□□ 1.44
YIPF4-204ENST00000495355 NMRK2Q9NPI5 230 aa24.02■■□□□ 1.44
YIPF4-204ENST00000495355 SNRPA1P09661 255 aaKnown RBP24.01■■□□□ 1.43
YIPF4-204ENST00000495355 C2CD5Q86YS7 1000 aa24.01■■□□□ 1.43
YIPF4-204ENST00000495355 MIS18AQ9NYP9 233 aa24.01■■□□□ 1.43
YIPF4-204ENST00000495355 DZIP3Q86Y13 1208 aaKnown RBP24■■□□□ 1.43
YIPF4-204ENST00000495355 RNF181Q9P0P0 153 aa24■■□□□ 1.43
YIPF4-204ENST00000495355 TAF7Q15545 349 aaPredicted RBP23.99■■□□□ 1.43
YIPF4-204ENST00000495355 HSPA6P17066 643 aa23.98■■□□□ 1.43
YIPF4-204ENST00000495355 TTLL6Q8N841 843 aa23.98■■□□□ 1.43
YIPF4-204ENST00000495355 THUMPD2Q9BTF0 503 aaKnown RBP23.98■■□□□ 1.43
YIPF4-204ENST00000495355 BRIP1Q9BX63 1249 aa23.97■■□□□ 1.43
YIPF4-204ENST00000495355 H0YIN7 160 aa23.96■■□□□ 1.43
YIPF4-204ENST00000495355 NFKBIEO00221 500 aa23.96■■□□□ 1.43
YIPF4-204ENST00000495355 NFE2L2Q16236 605 aa23.96■■□□□ 1.43
YIPF4-204ENST00000495355 CCDC88AQ3V6T2 1871 aa23.96■■□□□ 1.43
YIPF4-204ENST00000495355 SETDB2Q96T68 719 aa23.95■■□□□ 1.42
YIPF4-204ENST00000495355 TIAM2Q8IVF5 1701 aa23.95■■□□□ 1.42
YIPF4-204ENST00000495355 FER1L6Q2WGJ9 1857 aa23.94■■□□□ 1.42
YIPF4-204ENST00000495355 CACNA1SQ13698 1873 aa23.94■■□□□ 1.42
YIPF4-204ENST00000495355 SLX4Q8IY92 1834 aa23.94■■□□□ 1.42
YIPF4-204ENST00000495355 ARFGEF2Q9Y6D5 1785 aa23.93■■□□□ 1.42
YIPF4-204ENST00000495355 CNBD1Q8NA66 436 aa23.93■■□□□ 1.42
YIPF4-204ENST00000495355 TNRC6CQ9HCJ0 1690 aaKnown RBP23.92■■□□□ 1.42
YIPF4-204ENST00000495355 TOMM70O94826 608 aa23.92■■□□□ 1.42
YIPF4-204ENST00000495355 EIF4A1P60842 406 aaKnown RBP23.92■■□□□ 1.42
YIPF4-204ENST00000495355 CLEC4GQ6UXB4 293 aa23.92■■□□□ 1.42
YIPF4-204ENST00000495355 PDE6BP35913 854 aa23.91■■□□□ 1.42
YIPF4-204ENST00000495355 HLFQ16534 295 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms