RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 MPNDQ8N594 471 aa16.21■□□□□ 0.18
SUPT20H-222ENST00000495071 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
SUPT20H-222ENST00000495071 PLCB2Q00722 1185 aa16.2■□□□□ 0.18
SUPT20H-222ENST00000495071 DNTTIP2Q5QJE6 756 aaKnown RBP16.2■□□□□ 0.18
SUPT20H-222ENST00000495071 ADAMTS13Q76LX8 1427 aa16.2■□□□□ 0.18
SUPT20H-222ENST00000495071 HOXC9P31274 260 aa16.2■□□□□ 0.18
SUPT20H-222ENST00000495071 KIF1BPQ96EK5 621 aa16.2■□□□□ 0.18
SUPT20H-222ENST00000495071 IL25Q9H293 177 aa16.2■□□□□ 0.18
SUPT20H-222ENST00000495071 DIAPH3Q9NSV4 1193 aa16.2■□□□□ 0.18
SUPT20H-222ENST00000495071 FAM13BQ9NYF5 915 aa16.2■□□□□ 0.18
SUPT20H-222ENST00000495071 KDRP35968 1356 aa16.19■□□□□ 0.18
SUPT20H-222ENST00000495071 MAP3K5Q99683 1374 aa16.19■□□□□ 0.18
SUPT20H-222ENST00000495071 SMC3Q9UQE7 1217 aa16.19■□□□□ 0.18
SUPT20H-222ENST00000495071 SSH2Q76I76 1423 aa16.19■□□□□ 0.18
SUPT20H-222ENST00000495071 HSPA4P34932 840 aa16.19■□□□□ 0.18
SUPT20H-222ENST00000495071 SSH3Q8TE77 659 aa16.19■□□□□ 0.18
SUPT20H-222ENST00000495071 SPG7Q9UQ90 795 aa16.19■□□□□ 0.18
SUPT20H-222ENST00000495071 CSPP1Q1MSJ5 1256 aa16.18■□□□□ 0.18
SUPT20H-222ENST00000495071 PEAK1Q9H792 1746 aa16.18■□□□□ 0.18
SUPT20H-222ENST00000495071 CEP170BQ9Y4F5 1589 aaPredicted RBP16.18■□□□□ 0.18
SUPT20H-222ENST00000495071 AOX1Q06278 1338 aa16.17■□□□□ 0.18
SUPT20H-222ENST00000495071 FIBPO43427 364 aa16.17■□□□□ 0.18
SUPT20H-222ENST00000495071 ANXA1P04083 346 aa16.17■□□□□ 0.18
SUPT20H-222ENST00000495071 PI4KAP2A4QPH2 592 aa16.17■□□□□ 0.18
SUPT20H-222ENST00000495071 ZNF500O60304 480 aaPredicted RBP16.17■□□□□ 0.18
SUPT20H-222ENST00000495071 NBPF7P0C2Y1 421 aaPredicted RBP16.17■□□□□ 0.18
SUPT20H-222ENST00000495071 KCNJ4P48050 445 aa16.17■□□□□ 0.18
SUPT20H-222ENST00000495071 PI4KAP1Q8N8J0 262 aa16.17■□□□□ 0.18
SUPT20H-222ENST00000495071 RIMS1Q86UR5 1692 aaKnown RBP16.17■□□□□ 0.18
SUPT20H-222ENST00000495071 CNPY2Q9Y2B0 182 aa16.17■□□□□ 0.18
SUPT20H-222ENST00000495071 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.17■□□□□ 0.18
SUPT20H-222ENST00000495071 SGSM2O43147 1006 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 TEFQ10587 303 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 AK2P54819 239 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 HSP90AB4PQ58FF6 505 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 CHPF2Q9P2E5 772 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 SNX14Q9Y5W7 946 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 PLEKHG1Q9ULL1 1385 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 RAD50Q92878 1312 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 UQCRHLA0A096LP55 91 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 UQCRHP07919 91 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 CASTP20810 708 aaKnown RBP16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 MCM5P33992 734 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 DNAAF4Q8WXU2 420 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 LIMCH1Q9UPQ0 1083 aa16.16■□□□□ 0.18
SUPT20H-222ENST00000495071 CPA1P15085 419 aa16.15■□□□□ 0.18
SUPT20H-222ENST00000495071 DIP2BQ9P265 1576 aa16.15■□□□□ 0.18
SUPT20H-222ENST00000495071 DTNBO60941 627 aa16.15■□□□□ 0.18
SUPT20H-222ENST00000495071 CLASRPQ8N2M8 674 aaKnown RBP16.15■□□□□ 0.18
SUPT20H-222ENST00000495071 C9orf78Q9NZ63 289 aaPredicted RBP16.15■□□□□ 0.18
SUPT20H-222ENST00000495071 ATP6V1DQ9Y5K8 247 aa16.15■□□□□ 0.18
SUPT20H-222ENST00000495071 RUFY2Q8WXA3 655 aa16.15■□□□□ 0.18
SUPT20H-222ENST00000495071 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.15■□□□□ 0.18
SUPT20H-222ENST00000495071 STX6O43752 255 aa16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 ZSCAN22P10073 491 aaPredicted RBP16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 USP25Q9UHP3 1055 aa16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 KIAA2012Q0VF49 1180 aa16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 RASEFQ8IZ41 740 aa16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 PI4K2BQ8TCG2 481 aa16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 PDCL3Q9H2J4 239 aa16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 IFIT2P09913 472 aaKnown RBP16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 CCDC183Q5T5S1 534 aa16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 DDX54Q8TDD1 881 aaKnown RBP16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 ARID3AQ99856 593 aa16.14■□□□□ 0.17
SUPT20H-222ENST00000495071 CCDC83Q8IWF9 413 aa16.13■□□□□ 0.17
SUPT20H-222ENST00000495071 GPATCH3Q96I76 525 aa16.13■□□□□ 0.17
SUPT20H-222ENST00000495071 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
SUPT20H-222ENST00000495071 GLRX3O76003 335 aaKnown RBP16.13■□□□□ 0.17
SUPT20H-222ENST00000495071 SYT1P21579 422 aa16.13■□□□□ 0.17
SUPT20H-222ENST00000495071 JAKMIP1Q96N16 626 aaKnown RBP16.13■□□□□ 0.17
SUPT20H-222ENST00000495071 FAM184AQ8NB25 1140 aa16.13■□□□□ 0.17
SUPT20H-222ENST00000495071 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
SUPT20H-222ENST00000495071 PTPRUQ92729 1446 aa16.12■□□□□ 0.17
SUPT20H-222ENST00000495071 PRPF40BQ6NWY9 871 aaKnown RBP16.12■□□□□ 0.17
SUPT20H-222ENST00000495071 BABAM1Q9NWV8 329 aa16.12■□□□□ 0.17
SUPT20H-222ENST00000495071 HCLS1P14317 486 aaPredicted RBP16.12■□□□□ 0.17
SUPT20H-222ENST00000495071 LGR6Q9HBX8 967 aa16.12■□□□□ 0.17
SUPT20H-222ENST00000495071 EPB41L2O43491 1005 aaKnown RBP16.12■□□□□ 0.17
SUPT20H-222ENST00000495071 POLA2Q14181 598 aa16.12■□□□□ 0.17
SUPT20H-222ENST00000495071 LSG1Q9H089 658 aaKnown RBP16.12■□□□□ 0.17
SUPT20H-222ENST00000495071 RUFY3Q7L099 469 aa16.11■□□□□ 0.17
SUPT20H-222ENST00000495071 PDRG1Q9NUG6 133 aa16.11■□□□□ 0.17
SUPT20H-222ENST00000495071 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
SUPT20H-222ENST00000495071 TERF1P54274 439 aa16.11■□□□□ 0.17
SUPT20H-222ENST00000495071 ZNF830Q96NB3 372 aaPredicted RBP16.11■□□□□ 0.17
SUPT20H-222ENST00000495071 TBX22Q9Y458 520 aa16.11■□□□□ 0.17
SUPT20H-222ENST00000495071 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
SUPT20H-222ENST00000495071 ZKSCAN1P17029 563 aaPredicted RBP16.1■□□□□ 0.17
SUPT20H-222ENST00000495071 UBE2HP62256 183 aa16.1■□□□□ 0.17
SUPT20H-222ENST00000495071 RGPD1P0DJD0 1748 aa16.1■□□□□ 0.17
SUPT20H-222ENST00000495071 KCNQ3O43525 872 aa16.1■□□□□ 0.17
SUPT20H-222ENST00000495071 ZNF530Q6P9A1 599 aaPredicted RBP16.1■□□□□ 0.17
SUPT20H-222ENST00000495071 CYP46A1Q9Y6A2 500 aa16.1■□□□□ 0.17
SUPT20H-222ENST00000495071 F13A1P00488 732 aa16.1■□□□□ 0.17
SUPT20H-222ENST00000495071 GJB2P29033 226 aa16.1■□□□□ 0.17
SUPT20H-222ENST00000495071 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
SUPT20H-222ENST00000495071 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
SUPT20H-222ENST00000495071 BEND3Q5T5X7 828 aa16.09■□□□□ 0.17
SUPT20H-222ENST00000495071 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms