RNA–Protein interactions for RNA: ENST00000495040.1

PLXNA3-208, Transcript of plexin A3, humanhuman

TSL 5

Gene PLXNA3, Length 421 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-208ENST00000495040 COL15A1P39059 1388 aa35.48■■■■□ 3.27
PLXNA3-208ENST00000495040 KIAA1551Q9HCM1 1747 aa35.47■■■■□ 3.27
PLXNA3-208ENST00000495040 USPL1Q5W0Q7 1092 aa35.47■■■■□ 3.27
PLXNA3-208ENST00000495040 N4BP2Q86UW6 1770 aaPredicted RBP35.46■■■■□ 3.27
PLXNA3-208ENST00000495040 BTBD11A6QL63 1104 aa35.46■■■■□ 3.27
PLXNA3-208ENST00000495040 FMNL2Q96PY5 1086 aa35.46■■■■□ 3.27
PLXNA3-208ENST00000495040 NARFQ9UHQ1 456 aa35.46■■■■□ 3.27
PLXNA3-208ENST00000495040 HTATSF1O43719 755 aaKnown RBP35.44■■■■□ 3.26
PLXNA3-208ENST00000495040 CANXP27824 592 aaKnown RBP35.44■■■■□ 3.26
PLXNA3-208ENST00000495040 NEFMP07197 916 aa35.43■■■■□ 3.26
PLXNA3-208ENST00000495040 TM4SF1P30408 202 aa35.43■■■■□ 3.26
PLXNA3-208ENST00000495040 DDR1Q08345 913 aa35.43■■■■□ 3.26
PLXNA3-208ENST00000495040 A0A0G2JLW4 131 aa35.42■■■■□ 3.26
PLXNA3-208ENST00000495040 MCM10Q7L590 875 aa35.42■■■■□ 3.26
PLXNA3-208ENST00000495040 POLRMTO00411 1230 aaKnown RBP35.4■■■■□ 3.26
PLXNA3-208ENST00000495040 EIF5P55010 431 aaKnown RBP35.4■■■■□ 3.26
PLXNA3-208ENST00000495040 A0A087WZG4 1122 aa35.39■■■■□ 3.26
PLXNA3-208ENST00000495040 DPEP1P16444 411 aa35.39■■■■□ 3.26
PLXNA3-208ENST00000495040 RALBP1Q15311 655 aa35.39■■■■□ 3.26
PLXNA3-208ENST00000495040 KCNQ3O43525 872 aa35.38■■■■□ 3.25
PLXNA3-208ENST00000495040 DCTN1Q14203 1278 aa35.36■■■■□ 3.25
PLXNA3-208ENST00000495040 BCS1LQ9Y276 419 aa35.36■■■■□ 3.25
PLXNA3-208ENST00000495040 BRCA1P38398 1863 aaKnown RBP35.35■■■■□ 3.25
PLXNA3-208ENST00000495040 DDX10Q13206 875 aaKnown RBP35.35■■■■□ 3.25
PLXNA3-208ENST00000495040 NFIXQ14938 502 aa35.35■■■■□ 3.25
PLXNA3-208ENST00000495040 PNNQ9H307 717 aaKnown RBP35.35■■■■□ 3.25
PLXNA3-208ENST00000495040 BCL2L12Q9HB09 334 aa35.35■■■■□ 3.25
PLXNA3-208ENST00000495040 IL6STP40189 918 aaPredicted RBP35.34■■■■□ 3.25
PLXNA3-208ENST00000495040 PLEKHF1Q96S99 279 aa35.33■■■■□ 3.25
PLXNA3-208ENST00000495040 DLG5Q8TDM6 1919 aa35.33■■■■□ 3.25
PLXNA3-208ENST00000495040 AFDNP55196 1824 aaKnown RBP35.32■■■■□ 3.24
PLXNA3-208ENST00000495040 KCNA3P22001 575 aa35.31■■■■□ 3.24
PLXNA3-208ENST00000495040 NPM2Q86SE8 214 aaKnown RBP35.31■■■■□ 3.24
PLXNA3-208ENST00000495040 A1BGP04217 495 aa35.3■■■■□ 3.24
PLXNA3-208ENST00000495040 TAF7Q15545 349 aaPredicted RBP35.3■■■■□ 3.24
PLXNA3-208ENST00000495040 PIM2Q9P1W9 311 aa35.3■■■■□ 3.24
PLXNA3-208ENST00000495040 ZNF330Q9Y3S2 320 aaPredicted RBP35.3■■■■□ 3.24
PLXNA3-208ENST00000495040 SNRPA1P09661 255 aaKnown RBP35.29■■■■□ 3.24
PLXNA3-208ENST00000495040 ATP10DQ9P241 1426 aa35.29■■■■□ 3.24
PLXNA3-208ENST00000495040 ADCY9O60503 1353 aa35.28■■■■□ 3.24
PLXNA3-208ENST00000495040 USP16Q9Y5T5 823 aa35.28■■■■□ 3.24
PLXNA3-208ENST00000495040 NRXN2Q9P2S2 1712 aa35.28■■■■□ 3.24
PLXNA3-208ENST00000495040 SERPINB2P05120 415 aa35.27■■■■□ 3.24
PLXNA3-208ENST00000495040 NFE2L2Q16236 605 aa35.27■■■■□ 3.24
PLXNA3-208ENST00000495040 MAPK8IP3Q9UPT6 1336 aa35.27■■■■□ 3.24
PLXNA3-208ENST00000495040 GIGYF1O75420 1035 aaPredicted RBP35.26■■■■□ 3.24
PLXNA3-208ENST00000495040 TBC1D2BQ9UPU7 963 aa35.26■■■■□ 3.24
PLXNA3-208ENST00000495040 ARFGEF1Q9Y6D6 1849 aa35.26■■■■□ 3.24
PLXNA3-208ENST00000495040 SCN7AQ01118 1682 aa35.25■■■■□ 3.23
PLXNA3-208ENST00000495040 PRAMEF22A3QJZ6 481 aa35.23■■■■□ 3.23
PLXNA3-208ENST00000495040 CHRNA5P30532 468 aa35.23■■■■□ 3.23
PLXNA3-208ENST00000495040 DALRD3Q5D0E6 543 aaKnown RBP35.23■■■■□ 3.23
PLXNA3-208ENST00000495040 BICDL1Q6ZP65 573 aa35.23■■■■□ 3.23
PLXNA3-208ENST00000495040 PNISRQ8TF01 805 aaKnown RBP35.23■■■■□ 3.23
PLXNA3-208ENST00000495040 C1QTNF8P60827 252 aa35.22■■■■□ 3.23
PLXNA3-208ENST00000495040 ARHGAP27Q6ZUM4 889 aa35.22■■■■□ 3.23
PLXNA3-208ENST00000495040 MYBBP1AQ9BQG0 1328 aaKnown RBP35.22■■■■□ 3.23
PLXNA3-208ENST00000495040 TBC1D9BQ66K14 1250 aa35.2■■■■□ 3.23
PLXNA3-208ENST00000495040 GPBP1L1Q9HC44 474 aaPredicted RBP35.19■■■■□ 3.22
PLXNA3-208ENST00000495040 MIS18AQ9NYP9 233 aa35.19■■■■□ 3.22
PLXNA3-208ENST00000495040 CAMTA2O94983 1202 aa35.18■■■■□ 3.22
PLXNA3-208ENST00000495040 DZIP3Q86Y13 1208 aaKnown RBP35.18■■■■□ 3.22
PLXNA3-208ENST00000495040 KDM3BQ7LBC6 1761 aa35.16■■■■□ 3.22
PLXNA3-208ENST00000495040 PIP4K2AP48426 406 aaPredicted RBP35.16■■■■□ 3.22
PLXNA3-208ENST00000495040 BCORQ6W2J9 1755 aa35.15■■■■□ 3.22
PLXNA3-208ENST00000495040 CARMIL3Q8ND23 1372 aa35.15■■■■□ 3.22
PLXNA3-208ENST00000495040 THUMPD2Q9BTF0 503 aaKnown RBP35.14■■■■□ 3.22
PLXNA3-208ENST00000495040 ZNF526Q8TF50 670 aaPredicted RBP35.13■■■■□ 3.21
PLXNA3-208ENST00000495040 SETDB2Q96T68 719 aa35.13■■■■□ 3.21
PLXNA3-208ENST00000495040 LAMB4A4D0S4 1761 aa35.13■■■■□ 3.21
PLXNA3-208ENST00000495040 DLEC1Q9Y238 1755 aa35.13■■■■□ 3.21
PLXNA3-208ENST00000495040 NBPF26B4DH59 902 aa35.11■■■■□ 3.21
PLXNA3-208ENST00000495040 NBPF10Q6P3W6 841 aaKnown RBP35.11■■■■□ 3.21
PLXNA3-208ENST00000495040 CLEC4GQ6UXB4 293 aa35.11■■■■□ 3.21
PLXNA3-208ENST00000495040 NBPF15Q8N660 670 aa35.11■■■■□ 3.21
PLXNA3-208ENST00000495040 H0YIN7 160 aa35.1■■■■□ 3.21
PLXNA3-208ENST00000495040 RIPK4P57078 832 aa35.1■■■■□ 3.21
PLXNA3-208ENST00000495040 C2CD5Q86YS7 1000 aa35.1■■■■□ 3.21
PLXNA3-208ENST00000495040 EIF4A1P60842 406 aaKnown RBP35.09■■■■□ 3.21
PLXNA3-208ENST00000495040 PRR5LQ6MZQ0 368 aa35.09■■■■□ 3.21
PLXNA3-208ENST00000495040 PDZRN3Q9UPQ7 1066 aa35.09■■■■□ 3.21
PLXNA3-208ENST00000495040 ZNF652Q9Y2D9 606 aa35.09■■■■□ 3.21
PLXNA3-208ENST00000495040 BRIP1Q9BX63 1249 aa35.08■■■■□ 3.21
PLXNA3-208ENST00000495040 PDE6BP35913 854 aa35.07■■■■□ 3.2
PLXNA3-208ENST00000495040 ANKRD31Q8N7Z5 1873 aa35.07■■■■□ 3.2
PLXNA3-208ENST00000495040 RGL2O15211 777 aa35.06■■■■□ 3.2
PLXNA3-208ENST00000495040 TMPOP42166 694 aaKnown RBP35.06■■■■□ 3.2
PLXNA3-208ENST00000495040 TTLL6Q8N841 843 aa35.06■■■■□ 3.2
PLXNA3-208ENST00000495040 NPHP1O15259 732 aa35.05■■■■□ 3.2
PLXNA3-208ENST00000495040 LMOD3Q0VAK6 560 aa35.05■■■■□ 3.2
PLXNA3-208ENST00000495040 CNBD1Q8NA66 436 aa35.05■■■■□ 3.2
PLXNA3-208ENST00000495040 WDR43Q15061 677 aaKnown RBP eCLIP35.04■■■■□ 3.2
PLXNA3-208ENST00000495040 C9orf131Q5VYM1 1079 aa35.04■■■■□ 3.2
PLXNA3-208ENST00000495040 PRKRIP1Q9H875 184 aaPredicted RBP35.03■■■■□ 3.2
PLXNA3-208ENST00000495040 ST5P78524 1137 aa35.02■■■■□ 3.2
PLXNA3-208ENST00000495040 TSPYL4Q9UJ04 414 aa35.02■■■■□ 3.2
PLXNA3-208ENST00000495040 SENP3-EIF4A1A0A087X0R7 540 aa35.01■■■■□ 3.2
PLXNA3-208ENST00000495040 CCDC24Q8N4L8 307 aa35.01■■■■□ 3.2
PLXNA3-208ENST00000495040 SBF1O95248 1867 aa35.01■■■■□ 3.19
PLXNA3-208ENST00000495040 BABAM1Q9NWV8 329 aa35■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms