RNA–Protein interactions for RNA: ENST00000494954.1

PNKD-208, Transcript of PNKD, MBL domain containing, humanhuman

TSL 3

Gene PNKD, Length 248 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-208ENST00000494954 TRAPPC3LQ5T215 181 aa8.2□□□□□ -1.1
PNKD-208ENST00000494954 MPRIPQ6WCQ1 1025 aa8.2□□□□□ -1.1
PNKD-208ENST00000494954 SLC39A7Q92504 469 aa8.2□□□□□ -1.1
PNKD-208ENST00000494954 ABHD8Q96I13 439 aa8.2□□□□□ -1.1
PNKD-208ENST00000494954 RTCBQ9Y3I0 505 aaKnown RBP8.2□□□□□ -1.1
PNKD-208ENST00000494954 POTEJP0CG39 1038 aa8.19□□□□□ -1.1
PNKD-208ENST00000494954 C7P10643 843 aa8.19□□□□□ -1.1
PNKD-208ENST00000494954 ATN1P54259 1190 aaPredicted RBP8.19□□□□□ -1.1
PNKD-208ENST00000494954 MLLT1Q03111 559 aaPredicted RBP8.19□□□□□ -1.1
PNKD-208ENST00000494954 FAM161AQ3B820 660 aa8.19□□□□□ -1.1
PNKD-208ENST00000494954 RASEFQ8IZ41 740 aa8.19□□□□□ -1.1
PNKD-208ENST00000494954 ARHGEF1Q92888 912 aaKnown RBP8.19□□□□□ -1.1
PNKD-208ENST00000494954 COG3Q96JB2 828 aa8.19□□□□□ -1.1
PNKD-208ENST00000494954 LTBP3Q9NS15 1303 aa8.19□□□□□ -1.1
PNKD-208ENST00000494954 PLSCR2Q9NRY7 297 aa8.18□□□□□ -1.1
PNKD-208ENST00000494954 TRPC6Q9Y210 931 aa8.18□□□□□ -1.1
PNKD-208ENST00000494954 PARP3Q9Y6F1 533 aa8.18□□□□□ -1.1
PNKD-208ENST00000494954 ROCK2O75116 1388 aaKnown RBP8.18□□□□□ -1.1
PNKD-208ENST00000494954 FLT4P35916 1363 aa8.18□□□□□ -1.1
PNKD-208ENST00000494954 N4BP2Q86UW6 1770 aaPredicted RBP8.17□□□□□ -1.1
PNKD-208ENST00000494954 RASSF10A6NK89 507 aa8.17□□□□□ -1.1
PNKD-208ENST00000494954 MAP3K13O43283 966 aa8.17□□□□□ -1.1
PNKD-208ENST00000494954 TM4SF1P30408 202 aa8.17□□□□□ -1.1
PNKD-208ENST00000494954 ATP6V1AP38606 617 aa8.17□□□□□ -1.1
PNKD-208ENST00000494954 AMPHP49418 695 aa8.17□□□□□ -1.1
PNKD-208ENST00000494954 L3MBTL3Q96JM7 780 aaPredicted RBP8.17□□□□□ -1.1
PNKD-208ENST00000494954 SLC12A5Q9H2X9 1139 aa8.17□□□□□ -1.1
PNKD-208ENST00000494954 ATG3Q9NT62 314 aa8.17□□□□□ -1.1
PNKD-208ENST00000494954 USP42Q9H9J4 1324 aaKnown RBP8.17□□□□□ -1.1
PNKD-208ENST00000494954 SBF1O95248 1867 aa8.17□□□□□ -1.1
PNKD-208ENST00000494954 ERVV-2B6SEH9 535 aa8.16□□□□□ -1.1
PNKD-208ENST00000494954 HSPA8P11142 646 aaKnown RBP8.16□□□□□ -1.1
PNKD-208ENST00000494954 MAP2K1Q02750 393 aaPredicted RBP8.16□□□□□ -1.1
PNKD-208ENST00000494954 DPY19L2Q6NUT2 758 aa8.16□□□□□ -1.1
PNKD-208ENST00000494954 SMIM5Q71RC9 77 aa8.16□□□□□ -1.1
PNKD-208ENST00000494954 L3MBTL2Q969R5 705 aa8.16□□□□□ -1.1
PNKD-208ENST00000494954 AIDAQ96BJ3 306 aa8.16□□□□□ -1.1
PNKD-208ENST00000494954 SLC4A9Q96Q91 983 aa8.16□□□□□ -1.1
PNKD-208ENST00000494954 THSD7BQ9C0I4 1608 aa8.16□□□□□ -1.1
PNKD-208ENST00000494954 TMOD3Q9NYL9 352 aa8.16□□□□□ -1.1
PNKD-208ENST00000494954 ASAP1Q9ULH1 1129 aa8.16□□□□□ -1.1
PNKD-208ENST00000494954 PDZRN3Q9UPQ7 1066 aa8.16□□□□□ -1.1
PNKD-208ENST00000494954 SPG7Q9UQ90 795 aa8.16□□□□□ -1.1
PNKD-208ENST00000494954 ITGB4P16144 1822 aa8.15□□□□□ -1.1
PNKD-208ENST00000494954 NFKBIEO00221 500 aa8.15□□□□□ -1.1
PNKD-208ENST00000494954 POLRMTO00411 1230 aaKnown RBP8.15□□□□□ -1.1
PNKD-208ENST00000494954 ITGBL1O95965 494 aaPredicted RBP8.15□□□□□ -1.1
PNKD-208ENST00000494954 RFC4P35249 363 aa8.15□□□□□ -1.1
PNKD-208ENST00000494954 DDR1Q08345 913 aa8.15□□□□□ -1.1
PNKD-208ENST00000494954 LTV1Q96GA3 475 aaPredicted RBP8.15□□□□□ -1.1
PNKD-208ENST00000494954 BMP2KQ9NSY1 1161 aaPredicted RBP8.15□□□□□ -1.1
PNKD-208ENST00000494954 COL5A3P25940 1745 aaPredicted RBP8.15□□□□□ -1.11
PNKD-208ENST00000494954 NRXN2Q9P2S2 1712 aa8.15□□□□□ -1.11
PNKD-208ENST00000494954 FYB1O15117 783 aa8.14□□□□□ -1.11
PNKD-208ENST00000494954 PHKG2P15735 406 aa8.14□□□□□ -1.11
PNKD-208ENST00000494954 VEGFBP49765 207 aa8.14□□□□□ -1.11
PNKD-208ENST00000494954 LDHDQ86WU2 507 aa8.14□□□□□ -1.11
PNKD-208ENST00000494954 ADAMTS7Q9UKP4 1686 aa8.14□□□□□ -1.11
PNKD-208ENST00000494954 IQCA1LA6NCM1 817 aa8.13□□□□□ -1.11
PNKD-208ENST00000494954 TMEM88BA6NKF7 163 aa8.13□□□□□ -1.11
PNKD-208ENST00000494954 TNRC18O15417 2968 aaPredicted RBP8.13□□□□□ -1.11
PNKD-208ENST00000494954 LBX1P52954 281 aa8.13□□□□□ -1.11
PNKD-208ENST00000494954 IFNL2Q8IZJ0 200 aa8.13□□□□□ -1.11
PNKD-208ENST00000494954 PLCD3Q8N3E9 789 aa8.13□□□□□ -1.11
PNKD-208ENST00000494954 TTLL6Q8N841 843 aa8.13□□□□□ -1.11
PNKD-208ENST00000494954 MKRN1Q9UHC7 482 aaKnown RBP8.13□□□□□ -1.11
PNKD-208ENST00000494954 PDE4DIPQ5VU43 2346 aa8.13□□□□□ -1.11
PNKD-208ENST00000494954 WASHC2AQ641Q2 1341 aa8.12□□□□□ -1.11
PNKD-208ENST00000494954 POTEFA5A3E0 1075 aa8.12□□□□□ -1.11
PNKD-208ENST00000494954 POTEMA6NI47 508 aa8.12□□□□□ -1.11
PNKD-208ENST00000494954 CHRNA5P30532 468 aa8.12□□□□□ -1.11
PNKD-208ENST00000494954 FKBP8Q14318 412 aa8.12□□□□□ -1.11
PNKD-208ENST00000494954 HSP90AB2PQ58FF8 381 aa8.12□□□□□ -1.11
PNKD-208ENST00000494954 USHBP1Q8N6Y0 703 aa8.12□□□□□ -1.11
PNKD-208ENST00000494954 TESK2Q96S53 571 aa8.12□□□□□ -1.11
PNKD-208ENST00000494954 VIRMAQ69YN4 1812 aaKnown RBP8.12□□□□□ -1.11
PNKD-208ENST00000494954 RGPD2P0DJD1 1756 aa8.12□□□□□ -1.11
PNKD-208ENST00000494954 DLEC1Q9Y238 1755 aa8.12□□□□□ -1.11
PNKD-208ENST00000494954 CA12O43570 354 aa8.11□□□□□ -1.11
PNKD-208ENST00000494954 HSP90AB1P08238 724 aaKnown RBP8.11□□□□□ -1.11
PNKD-208ENST00000494954 RASSF7Q02833 373 aa8.11□□□□□ -1.11
PNKD-208ENST00000494954 ADAMTSL1Q8N6G6 1762 aa8.11□□□□□ -1.11
PNKD-208ENST00000494954 ANKRD26Q9UPS8 1709 aa8.11□□□□□ -1.11
PNKD-208ENST00000494954 TIAM2Q8IVF5 1701 aa8.1□□□□□ -1.11
PNKD-208ENST00000494954 TIE1P35590 1138 aa8.1□□□□□ -1.11
PNKD-208ENST00000494954 RRS1Q15050 365 aaKnown RBP8.1□□□□□ -1.11
PNKD-208ENST00000494954 POTEGQ6S5H5 508 aa8.1□□□□□ -1.11
PNKD-208ENST00000494954 MAMSTRQ6ZN01 415 aa8.1□□□□□ -1.11
PNKD-208ENST00000494954 TMC1Q8TDI8 760 aa8.1□□□□□ -1.11
PNKD-208ENST00000494954 FBLN1P23142 703 aa8.09□□□□□ -1.11
PNKD-208ENST00000494954 CRKLP46109 303 aaKnown RBP8.09□□□□□ -1.11
PNKD-208ENST00000494954 SOGA3Q5TF21 947 aa8.09□□□□□ -1.11
PNKD-208ENST00000494954 INTS5Q6P9B9 1019 aaKnown RBP8.09□□□□□ -1.11
PNKD-208ENST00000494954 HHIPL1Q96JK4 782 aa8.09□□□□□ -1.11
PNKD-208ENST00000494954 TAF1DQ9H5J8 278 aaPredicted RBP8.09□□□□□ -1.11
PNKD-208ENST00000494954 WDR33Q9C0J8 1336 aaKnown RBP8.08□□□□□ -1.12
PNKD-208ENST00000494954 MAP2K2P36507 400 aa8.08□□□□□ -1.12
PNKD-208ENST00000494954 NUBP1P53384 320 aa8.08□□□□□ -1.12
PNKD-208ENST00000494954 DEFB115Q30KQ5 88 aa8.08□□□□□ -1.12
PNKD-208ENST00000494954 ERFEQ4G0M1 354 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms