RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	NFE2L2	Q16236	605 aa		13.64	□□□□□ -0.23
NEPRO-222	ENST00000494891	NARF	Q9UHQ1	456 aa		13.64	□□□□□ -0.23
NEPRO-222	ENST00000494891	ZBTB1	Q9Y2K1	713 aa		13.64	□□□□□ -0.23
NEPRO-222	ENST00000494891	KIAA1551	Q9HCM1	1747 aa		13.64	□□□□□ -0.23
NEPRO-222	ENST00000494891	TM4SF1	P30408	202 aa		13.63	□□□□□ -0.23
NEPRO-222	ENST00000494891	TGFB2	P61812	414 aa		13.63	□□□□□ -0.23
NEPRO-222	ENST00000494891	TAF7	Q15545	349 aa	Predicted RBP	13.63	□□□□□ -0.23
NEPRO-222	ENST00000494891	GPR162	Q16538	588 aa		13.63	□□□□□ -0.23
NEPRO-222	ENST00000494891	MCM10	Q7L590	875 aa		13.63	□□□□□ -0.23
NEPRO-222	ENST00000494891	KLHL34	Q8N239	644 aa		13.63	□□□□□ -0.23
NEPRO-222	ENST00000494891	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.63	□□□□□ -0.23
NEPRO-222	ENST00000494891	ZPR1	O75312	459 aa		13.62	□□□□□ -0.23
NEPRO-222	ENST00000494891	IL6ST	P40189	918 aa	Predicted RBP	13.62	□□□□□ -0.23
NEPRO-222	ENST00000494891	PNISR	Q8TF01	805 aa	Known RBP	13.62	□□□□□ -0.23
NEPRO-222	ENST00000494891		A0A087WZG4	1122 aa		13.61	□□□□□ -0.23
NEPRO-222	ENST00000494891	RGL2	O15211	777 aa		13.61	□□□□□ -0.23
NEPRO-222	ENST00000494891	YBX3	P16989	372 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
NEPRO-222	ENST00000494891	FKBP8	Q14318	412 aa		13.61	□□□□□ -0.23
NEPRO-222	ENST00000494891	SRP68	Q9UHB9	627 aa	Known RBP	13.61	□□□□□ -0.23
NEPRO-222	ENST00000494891	PARP3	Q9Y6F1	533 aa		13.61	□□□□□ -0.23
NEPRO-222	ENST00000494891	NRXN2	Q9P2S2	1712 aa		13.61	□□□□□ -0.23
NEPRO-222	ENST00000494891	MAPK8IP3	Q9UPT6	1336 aa		13.61	□□□□□ -0.23
NEPRO-222	ENST00000494891	PXDNL	A1KZ92	1463 aa		13.61	□□□□□ -0.23
NEPRO-222	ENST00000494891	KDM3B	Q7LBC6	1761 aa		13.6	□□□□□ -0.23
NEPRO-222	ENST00000494891	KCNQ3	O43525	872 aa		13.6	□□□□□ -0.23
NEPRO-222	ENST00000494891	SNRPA1	P09661	255 aa	Known RBP	13.6	□□□□□ -0.23
NEPRO-222	ENST00000494891	DCTN1	Q14203	1278 aa		13.6	□□□□□ -0.23
NEPRO-222	ENST00000494891	USPL1	Q5W0Q7	1092 aa		13.6	□□□□□ -0.23
NEPRO-222	ENST00000494891	BABAM1	Q9NWV8	329 aa		13.6	□□□□□ -0.23
NEPRO-222	ENST00000494891	POLRMT	O00411	1230 aa	Known RBP	13.59	□□□□□ -0.23
NEPRO-222	ENST00000494891	DDR1	Q08345	913 aa		13.59	□□□□□ -0.23
NEPRO-222	ENST00000494891	BCL2L12	Q9HB09	334 aa		13.59	□□□□□ -0.23
NEPRO-222	ENST00000494891	SCN7A	Q01118	1682 aa		13.59	□□□□□ -0.23
NEPRO-222	ENST00000494891	BRCA1	P38398	1863 aa	Known RBP	13.59	□□□□□ -0.23
NEPRO-222	ENST00000494891	CANX	P27824	592 aa	Known RBP	13.57	□□□□□ -0.24
NEPRO-222	ENST00000494891	TMPO	P42166	694 aa	Known RBP	13.57	□□□□□ -0.24
NEPRO-222	ENST00000494891	LMOD3	Q0VAK6	560 aa		13.57	□□□□□ -0.24
NEPRO-222	ENST00000494891	NFIX	Q14938	502 aa		13.57	□□□□□ -0.24
NEPRO-222	ENST00000494891	USP16	Q9Y5T5	823 aa		13.57	□□□□□ -0.24
NEPRO-222	ENST00000494891	LAMB4	A4D0S4	1761 aa		13.57	□□□□□ -0.24
NEPRO-222	ENST00000494891	AFDN	P55196	1824 aa	Known RBP	13.56	□□□□□ -0.24
NEPRO-222	ENST00000494891	BCOR	Q6W2J9	1755 aa		13.55	□□□□□ -0.24
NEPRO-222	ENST00000494891	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.55	□□□□□ -0.24
NEPRO-222	ENST00000494891	GIGYF1	O75420	1035 aa	Predicted RBP	13.55	□□□□□ -0.24
NEPRO-222	ENST00000494891	A1BG	P04217	495 aa		13.55	□□□□□ -0.24
NEPRO-222	ENST00000494891	KCNA3	P22001	575 aa		13.55	□□□□□ -0.24
NEPRO-222	ENST00000494891	RIPK4	P57078	832 aa		13.55	□□□□□ -0.24
NEPRO-222	ENST00000494891	EIF4A1	P60842	406 aa	Known RBP	13.55	□□□□□ -0.24
NEPRO-222	ENST00000494891	CLEC4G	Q6UXB4	293 aa		13.55	□□□□□ -0.24
NEPRO-222	ENST00000494891	RUNDC1	Q96C34	613 aa		13.55	□□□□□ -0.24
NEPRO-222	ENST00000494891	PRAMEF22	A3QJZ6	481 aa		13.54	□□□□□ -0.24
NEPRO-222	ENST00000494891	CAMTA2	O94983	1202 aa		13.54	□□□□□ -0.24
NEPRO-222	ENST00000494891	WDR43	Q15061	677 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
NEPRO-222	ENST00000494891	PELP1	Q8IZL8	1130 aa	Known RBP	13.54	□□□□□ -0.24
NEPRO-222	ENST00000494891	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.54	□□□□□ -0.24
NEPRO-222	ENST00000494891	ADAMTS8	Q9UP79	889 aa		13.54	□□□□□ -0.24
NEPRO-222	ENST00000494891	ARFGEF1	Q9Y6D6	1849 aa		13.54	□□□□□ -0.24
NEPRO-222	ENST00000494891	SERPINB2	P05120	415 aa		13.53	□□□□□ -0.24
NEPRO-222	ENST00000494891	DPEP1	P16444	411 aa		13.53	□□□□□ -0.24
NEPRO-222	ENST00000494891	NPM2	Q86SE8	214 aa	Known RBP	13.53	□□□□□ -0.24
NEPRO-222	ENST00000494891	ERBB4	Q15303	1308 aa		13.53	□□□□□ -0.24
NEPRO-222	ENST00000494891		A0A0G2JLW4	131 aa		13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	NBPF26	B4DH59	902 aa		13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	NBPF10	Q6P3W6	841 aa	Known RBP	13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	DZIP3	Q86Y13	1208 aa	Known RBP	13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	NBPF15	Q8N660	670 aa		13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	THUMPD2	Q9BTF0	503 aa	Known RBP	13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	MIS18A	Q9NYP9	233 aa		13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	PDZRN3	Q9UPQ7	1066 aa		13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	TBC1D2B	Q9UPU7	963 aa		13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	ADCY9	O60503	1353 aa		13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	CARMIL3	Q8ND23	1372 aa		13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	DLEC1	Q9Y238	1755 aa		13.52	□□□□□ -0.25
NEPRO-222	ENST00000494891	TBC1D9B	Q66K14	1250 aa		13.51	□□□□□ -0.25
NEPRO-222	ENST00000494891	PIM2	Q9P1W9	311 aa		13.51	□□□□□ -0.25
NEPRO-222	ENST00000494891	TRIM35	Q9UPQ4	493 aa		13.51	□□□□□ -0.25
NEPRO-222	ENST00000494891	ERVV-1	B6SEH8	477 aa		13.49	□□□□□ -0.25
NEPRO-222	ENST00000494891	CHL1	O00533	1208 aa		13.49	□□□□□ -0.25
NEPRO-222	ENST00000494891	SETDB2	Q96T68	719 aa		13.49	□□□□□ -0.25
NEPRO-222	ENST00000494891	BRIP1	Q9BX63	1249 aa		13.49	□□□□□ -0.25
NEPRO-222	ENST00000494891	TSPYL4	Q9UJ04	414 aa		13.49	□□□□□ -0.25
NEPRO-222	ENST00000494891	ZNF652	Q9Y2D9	606 aa		13.49	□□□□□ -0.25
NEPRO-222	ENST00000494891	NCBP3	Q53F19	620 aa	Known RBP	13.48	□□□□□ -0.25
NEPRO-222	ENST00000494891	DALRD3	Q5D0E6	543 aa	Known RBP	13.48	□□□□□ -0.25
NEPRO-222	ENST00000494891	CCDC146	Q8IYE0	955 aa		13.48	□□□□□ -0.25
NEPRO-222	ENST00000494891	BCS1L	Q9Y276	419 aa		13.48	□□□□□ -0.25
NEPRO-222	ENST00000494891	ANKRD31	Q8N7Z5	1873 aa		13.48	□□□□□ -0.25
NEPRO-222	ENST00000494891	PRR5L	Q6MZQ0	368 aa		13.47	□□□□□ -0.25
NEPRO-222	ENST00000494891	LRP10	Q7Z4F1	713 aa		13.47	□□□□□ -0.25
NEPRO-222	ENST00000494891	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.47	□□□□□ -0.25
NEPRO-222	ENST00000494891	HOXB7	P09629	217 aa		13.46	□□□□□ -0.25
NEPRO-222	ENST00000494891	PDE6B	P35913	854 aa		13.46	□□□□□ -0.25
NEPRO-222	ENST00000494891	PIP4K2A	P48426	406 aa	Predicted RBP	13.46	□□□□□ -0.25
NEPRO-222	ENST00000494891	CFAP44	Q96MT7	982 aa		13.46	□□□□□ -0.25
NEPRO-222	ENST00000494891	ATP10D	Q9P241	1426 aa		13.46	□□□□□ -0.26
NEPRO-222	ENST00000494891	MAP3K15	Q6ZN16	1313 aa		13.45	□□□□□ -0.26
NEPRO-222	ENST00000494891	KLRG2	A4D1S0	409 aa	Predicted RBP	13.45	□□□□□ -0.26
NEPRO-222	ENST00000494891		H0YIN7	160 aa		13.45	□□□□□ -0.26
NEPRO-222	ENST00000494891	ZNF853	P0CG23	659 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms