RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 PNNQ9H307 717 aaKnown RBP20.72■□□□□ 0.91
LIMS2-216ENST00000494613 NARFQ9UHQ1 456 aa20.72■□□□□ 0.91
LIMS2-216ENST00000494613 WWC3Q9ULE0 1092 aa20.72■□□□□ 0.91
LIMS2-216ENST00000494613 TJP1Q07157 1748 aa20.72■□□□□ 0.91
LIMS2-216ENST00000494613 VIRMAQ69YN4 1812 aaKnown RBP20.71■□□□□ 0.91
LIMS2-216ENST00000494613 A0A0G2JLW4 131 aa20.71■□□□□ 0.91
LIMS2-216ENST00000494613 EIF5P55010 431 aaKnown RBP20.71■□□□□ 0.91
LIMS2-216ENST00000494613 TAF7Q15545 349 aaPredicted RBP20.71■□□□□ 0.91
LIMS2-216ENST00000494613 ZNF784Q8NCA9 323 aaPredicted RBP20.71■□□□□ 0.91
LIMS2-216ENST00000494613 A1BGP04217 495 aa20.7■□□□□ 0.9
LIMS2-216ENST00000494613 USP16Q9Y5T5 823 aa20.7■□□□□ 0.9
LIMS2-216ENST00000494613 DDR1Q08345 913 aa20.69■□□□□ 0.9
LIMS2-216ENST00000494613 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
LIMS2-216ENST00000494613 BCL2L12Q9HB09 334 aa20.68■□□□□ 0.9
LIMS2-216ENST00000494613 GOLGB1Q14789 3259 aaKnown RBP20.68■□□□□ 0.9
LIMS2-216ENST00000494613 POLRMTO00411 1230 aaKnown RBP20.67■□□□□ 0.9
LIMS2-216ENST00000494613 NFE2L2Q16236 605 aa20.67■□□□□ 0.9
LIMS2-216ENST00000494613 CICQ96RK0 1608 aaPredicted RBP20.67■□□□□ 0.9
LIMS2-216ENST00000494613 A0A087WZG4 1122 aa20.66■□□□□ 0.9
LIMS2-216ENST00000494613 PRAMEF22A3QJZ6 481 aa20.66■□□□□ 0.9
LIMS2-216ENST00000494613 SNRPA1P09661 255 aaKnown RBP20.66■□□□□ 0.9
LIMS2-216ENST00000494613 DPEP1P16444 411 aa20.66■□□□□ 0.9
LIMS2-216ENST00000494613 NFIXQ14938 502 aa20.66■□□□□ 0.9
LIMS2-216ENST00000494613 COL15A1P39059 1388 aa20.66■□□□□ 0.9
LIMS2-216ENST00000494613 MYBBP1AQ9BQG0 1328 aaKnown RBP20.65■□□□□ 0.9
LIMS2-216ENST00000494613 KCNA3P22001 575 aa20.65■□□□□ 0.9
LIMS2-216ENST00000494613 ZEB1P37275 1124 aaPredicted RBP20.65■□□□□ 0.9
LIMS2-216ENST00000494613 IL6STP40189 918 aaPredicted RBP20.65■□□□□ 0.9
LIMS2-216ENST00000494613 TBC1D2BQ9UPU7 963 aa20.65■□□□□ 0.9
LIMS2-216ENST00000494613 CHD4Q14839 1912 aa20.65■□□□□ 0.9
LIMS2-216ENST00000494613 ZNF330Q9Y3S2 320 aaPredicted RBP20.64■□□□□ 0.89
LIMS2-216ENST00000494613 MAPK8IP3Q9UPT6 1336 aa20.63■□□□□ 0.89
LIMS2-216ENST00000494613 THUMPD2Q9BTF0 503 aaKnown RBP20.63■□□□□ 0.89
LIMS2-216ENST00000494613 SIPA1L3O60292 1781 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-216ENST00000494613 UBR2Q8IWV8 1755 aa20.63■□□□□ 0.89
LIMS2-216ENST00000494613 SERPINB2P05120 415 aa20.62■□□□□ 0.89
LIMS2-216ENST00000494613 RIPK4P57078 832 aa20.62■□□□□ 0.89
LIMS2-216ENST00000494613 NPM2Q86SE8 214 aaKnown RBP20.62■□□□□ 0.89
LIMS2-216ENST00000494613 BCS1LQ9Y276 419 aa20.62■□□□□ 0.89
LIMS2-216ENST00000494613 C4AP0C0L4 1744 aa20.61■□□□□ 0.89
LIMS2-216ENST00000494613 PIP4K2AP48426 406 aaPredicted RBP20.61■□□□□ 0.89
LIMS2-216ENST00000494613 BICDL1Q6ZP65 573 aa20.61■□□□□ 0.89
LIMS2-216ENST00000494613 PNISRQ8TF01 805 aaKnown RBP20.61■□□□□ 0.89
LIMS2-216ENST00000494613 PRKRIP1Q9H875 184 aaPredicted RBP20.61■□□□□ 0.89
LIMS2-216ENST00000494613 PXDNLA1KZ92 1463 aa20.61■□□□□ 0.89
LIMS2-216ENST00000494613 C10orf71Q711Q0 1435 aa20.61■□□□□ 0.89
LIMS2-216ENST00000494613 TBC1D9BQ66K14 1250 aa20.6■□□□□ 0.89
LIMS2-216ENST00000494613 PIM2Q9P1W9 311 aa20.6■□□□□ 0.89
LIMS2-216ENST00000494613 TMPOP42166 694 aaKnown RBP20.59■□□□□ 0.89
LIMS2-216ENST00000494613 CHRNA5P30532 468 aa20.58■□□□□ 0.89
LIMS2-216ENST00000494613 ADAMTS8Q9UP79 889 aa20.58■□□□□ 0.89
LIMS2-216ENST00000494613 NBPF26B4DH59 902 aa20.57■□□□□ 0.88
LIMS2-216ENST00000494613 GIGYF1O75420 1035 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-216ENST00000494613 CAMTA2O94983 1202 aa20.57■□□□□ 0.88
LIMS2-216ENST00000494613 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
LIMS2-216ENST00000494613 NBPF10Q6P3W6 841 aaKnown RBP20.57■□□□□ 0.88
LIMS2-216ENST00000494613 ARHGAP27Q6ZUM4 889 aa20.57■□□□□ 0.88
LIMS2-216ENST00000494613 DZIP3Q86Y13 1208 aaKnown RBP20.57■□□□□ 0.88
LIMS2-216ENST00000494613 CCDC146Q8IYE0 955 aa20.57■□□□□ 0.88
LIMS2-216ENST00000494613 NBPF15Q8N660 670 aa20.57■□□□□ 0.88
LIMS2-216ENST00000494613 KIF13BQ9NQT8 1826 aa20.56■□□□□ 0.88
LIMS2-216ENST00000494613 N4BP2Q86UW6 1770 aaPredicted RBP20.55■□□□□ 0.88
LIMS2-216ENST00000494613 WDR43Q15061 677 aaKnown RBP eCLIP20.55■□□□□ 0.88
LIMS2-216ENST00000494613 NEUROD2Q15784 382 aa20.55■□□□□ 0.88
LIMS2-216ENST00000494613 DALRD3Q5D0E6 543 aaKnown RBP20.54■□□□□ 0.88
LIMS2-216ENST00000494613 RUNDC1Q96C34 613 aa20.54■□□□□ 0.88
LIMS2-216ENST00000494613 SETDB2Q96T68 719 aa20.54■□□□□ 0.88
LIMS2-216ENST00000494613 RRP7AQ9Y3A4 280 aaKnown RBP20.54■□□□□ 0.88
LIMS2-216ENST00000494613 CLEC4GQ6UXB4 293 aa20.53■□□□□ 0.88
LIMS2-216ENST00000494613 DLG5Q8TDM6 1919 aa20.52■□□□□ 0.88
LIMS2-216ENST00000494613 CCDC24Q8N4L8 307 aa20.51■□□□□ 0.87
LIMS2-216ENST00000494613 TSPYL4Q9UJ04 414 aa20.51■□□□□ 0.87
LIMS2-216ENST00000494613 KIAA1551Q9HCM1 1747 aa20.5■□□□□ 0.87
LIMS2-216ENST00000494613 H0YIN7 160 aa20.5■□□□□ 0.87
LIMS2-216ENST00000494613 LMOD3Q0VAK6 560 aa20.5■□□□□ 0.87
LIMS2-216ENST00000494613 C2CD5Q86YS7 1000 aa20.5■□□□□ 0.87
LIMS2-216ENST00000494613 NGEFQ8N5V2 710 aa20.5■□□□□ 0.87
LIMS2-216ENST00000494613 BRIP1Q9BX63 1249 aa20.5■□□□□ 0.87
LIMS2-216ENST00000494613 BABAM1Q9NWV8 329 aa20.5■□□□□ 0.87
LIMS2-216ENST00000494613 TRIM35Q9UPQ4 493 aa20.5■□□□□ 0.87
LIMS2-216ENST00000494613 PRR5LQ6MZQ0 368 aa20.49■□□□□ 0.87
LIMS2-216ENST00000494613 ZNF316A6NFI3 1004 aaPredicted RBP20.47■□□□□ 0.87
LIMS2-216ENST00000494613 PDE6BP35913 854 aa20.47■□□□□ 0.87
LIMS2-216ENST00000494613 HLFQ16534 295 aa20.47■□□□□ 0.87
LIMS2-216ENST00000494613 TTLL6Q8N841 843 aa20.47■□□□□ 0.87
LIMS2-216ENST00000494613 ZNF652Q9Y2D9 606 aa20.47■□□□□ 0.87
LIMS2-216ENST00000494613 CARMIL3Q8ND23 1372 aa20.46■□□□□ 0.87
LIMS2-216ENST00000494613 AFDNP55196 1824 aaKnown RBP20.46■□□□□ 0.87
LIMS2-216ENST00000494613 CHL1O00533 1208 aa20.46■□□□□ 0.87
LIMS2-216ENST00000494613 MYL6BP14649 208 aa20.46■□□□□ 0.87
LIMS2-216ENST00000494613 C1QTNF8P60827 252 aa20.46■□□□□ 0.87
LIMS2-216ENST00000494613 ZNF526Q8TF50 670 aaPredicted RBP20.46■□□□□ 0.87
LIMS2-216ENST00000494613 ATP10DQ9P241 1426 aa20.45■□□□□ 0.86
LIMS2-216ENST00000494613 RGL2O15211 777 aa20.45■□□□□ 0.86
LIMS2-216ENST00000494613 NPHP1O15259 732 aa20.45■□□□□ 0.86
LIMS2-216ENST00000494613 EIF2S2P20042 333 aaKnown RBP20.45■□□□□ 0.86
LIMS2-216ENST00000494613 CNBD1Q8NA66 436 aa20.45■□□□□ 0.86
LIMS2-216ENST00000494613 ZNF622Q969S3 477 aaKnown RBP eCLIP20.45■□□□□ 0.86
LIMS2-216ENST00000494613 GPBP1L1Q9HC44 474 aaPredicted RBP20.45■□□□□ 0.86
LIMS2-216ENST00000494613 PDZRN3Q9UPQ7 1066 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms