RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 AHDC1Q5TGY3 1603 aaPredicted RBP11.75□□□□□ -0.53
RIF1-211ENST00000494333 SETD1AO15047 1707 aaKnown RBP11.75□□□□□ -0.53
RIF1-211ENST00000494333 PPEF1O14829 653 aaPredicted RBP11.75□□□□□ -0.53
RIF1-211ENST00000494333 PER1O15534 1290 aaPredicted RBP11.75□□□□□ -0.53
RIF1-211ENST00000494333 LYPD8Q6UX82 237 aa11.75□□□□□ -0.53
RIF1-211ENST00000494333 SIRT1Q96EB6 747 aa11.75□□□□□ -0.53
RIF1-211ENST00000494333 PLEKHH1Q9ULM0 1364 aa11.75□□□□□ -0.53
RIF1-211ENST00000494333 YTHDC2Q9H6S0 1430 aaKnown RBP11.75□□□□□ -0.53
RIF1-211ENST00000494333 RNF223E7ERA6 249 aa11.74□□□□□ -0.53
RIF1-211ENST00000494333 GGCXP38435 758 aa11.74□□□□□ -0.53
RIF1-211ENST00000494333 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
RIF1-211ENST00000494333 TECPR2O15040 1411 aa11.74□□□□□ -0.53
RIF1-211ENST00000494333 SAFB2Q14151 953 aaKnown RBP eCLIP11.73□□□□□ -0.53
RIF1-211ENST00000494333 PTPRNQ16849 979 aa11.73□□□□□ -0.53
RIF1-211ENST00000494333 NALCNQ8IZF0 1738 aa11.73□□□□□ -0.53
RIF1-211ENST00000494333 BANK1Q8NDB2 785 aa11.73□□□□□ -0.53
RIF1-211ENST00000494333 GTF3C3Q9Y5Q9 886 aa11.73□□□□□ -0.53
RIF1-211ENST00000494333 MYOM2P54296 1465 aa11.72□□□□□ -0.53
RIF1-211ENST00000494333 NRXN1Q9ULB1 1477 aa11.72□□□□□ -0.53
RIF1-211ENST00000494333 SOS2Q07890 1332 aaPredicted RBP11.72□□□□□ -0.53
RIF1-211ENST00000494333 FOXO3O43524 673 aa11.72□□□□□ -0.53
RIF1-211ENST00000494333 USP17L8P0C7I0 530 aa11.72□□□□□ -0.53
RIF1-211ENST00000494333 LRRN4Q8WUT4 740 aa11.72□□□□□ -0.53
RIF1-211ENST00000494333 PRAM1Q96QH2 718 aa11.72□□□□□ -0.53
RIF1-211ENST00000494333 POGKQ9P215 609 aa11.72□□□□□ -0.53
RIF1-211ENST00000494333 A0A0G2JS52 829 aa11.71□□□□□ -0.53
RIF1-211ENST00000494333 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
RIF1-211ENST00000494333 NUDT12Q9BQG2 462 aa11.71□□□□□ -0.53
RIF1-211ENST00000494333 TRAK1Q9UPV9 953 aa11.71□□□□□ -0.53
RIF1-211ENST00000494333 FCF1Q9Y324 198 aaKnown RBP11.71□□□□□ -0.53
RIF1-211ENST00000494333 IFT172Q9UG01 1749 aa11.71□□□□□ -0.54
RIF1-211ENST00000494333 LRP6O75581 1613 aa11.71□□□□□ -0.54
RIF1-211ENST00000494333 NPHP3Q7Z494 1330 aa11.7□□□□□ -0.54
RIF1-211ENST00000494333 XPCQ01831 940 aaPredicted RBP11.7□□□□□ -0.54
RIF1-211ENST00000494333 ANKLE1Q8NAG6 615 aa11.7□□□□□ -0.54
RIF1-211ENST00000494333 SNRKQ9NRH2 765 aa11.7□□□□□ -0.54
RIF1-211ENST00000494333 PNPLA6Q8IY17 1366 aa11.69□□□□□ -0.54
RIF1-211ENST00000494333 CCNYL3P0C7X3 344 aa11.69□□□□□ -0.54
RIF1-211ENST00000494333 ADAMTS2O95450 1211 aa11.68□□□□□ -0.54
RIF1-211ENST00000494333 CCDC24Q8N4L8 307 aa11.68□□□□□ -0.54
RIF1-211ENST00000494333 C8orf37Q96NL8 207 aa11.68□□□□□ -0.54
RIF1-211ENST00000494333 EVA1BQ9NVM1 165 aa11.68□□□□□ -0.54
RIF1-211ENST00000494333 NGLY1Q96IV0 654 aa11.67□□□□□ -0.54
RIF1-211ENST00000494333 HIRIP3Q9BW71 556 aaPredicted RBP11.67□□□□□ -0.54
RIF1-211ENST00000494333 HMX1Q9NP08 348 aaPredicted RBP11.67□□□□□ -0.54
RIF1-211ENST00000494333 NHSL1Q5SYE7 1610 aa11.67□□□□□ -0.54
RIF1-211ENST00000494333 CDC42BPGQ6DT37 1551 aa11.67□□□□□ -0.54
RIF1-211ENST00000494333 AFF2P51816 1311 aa11.66□□□□□ -0.54
RIF1-211ENST00000494333 SHPRHQ149N8 1683 aa11.66□□□□□ -0.54
RIF1-211ENST00000494333 F12P00748 615 aaPredicted RBP11.66□□□□□ -0.54
RIF1-211ENST00000494333 PLA2G2CQ5R387 149 aa11.66□□□□□ -0.54
RIF1-211ENST00000494333 RXRBP28702 533 aa11.65□□□□□ -0.54
RIF1-211ENST00000494333 CTHP32929 405 aa11.65□□□□□ -0.54
RIF1-211ENST00000494333 KCNH2Q12809 1159 aa11.65□□□□□ -0.54
RIF1-211ENST00000494333 KRT28Q7Z3Y7 464 aa11.65□□□□□ -0.54
RIF1-211ENST00000494333 MTMR14Q8NCE2 650 aa11.65□□□□□ -0.54
RIF1-211ENST00000494333 MAP10Q9P2G4 905 aa11.65□□□□□ -0.54
RIF1-211ENST00000494333 MCM6Q14566 821 aa11.64□□□□□ -0.55
RIF1-211ENST00000494333 PTCRAQ6ISU1 281 aaPredicted RBP11.64□□□□□ -0.55
RIF1-211ENST00000494333 PMFBP1Q8TBY8 1022 aa11.64□□□□□ -0.55
RIF1-211ENST00000494333 SIN3AQ96ST3 1273 aa11.64□□□□□ -0.55
RIF1-211ENST00000494333 QTRT2Q9H974 415 aaKnown RBP11.64□□□□□ -0.55
RIF1-211ENST00000494333 KNDC1Q76NI1 1749 aa11.63□□□□□ -0.55
RIF1-211ENST00000494333 ADGRB1O14514 1584 aa11.63□□□□□ -0.55
RIF1-211ENST00000494333 PSME1Q06323 249 aa11.63□□□□□ -0.55
RIF1-211ENST00000494333 FLIIQ13045 1269 aa11.63□□□□□ -0.55
RIF1-211ENST00000494333 NEUROD1Q13562 356 aa11.63□□□□□ -0.55
RIF1-211ENST00000494333 NR6A1Q15406 480 aa11.63□□□□□ -0.55
RIF1-211ENST00000494333 EPS8L1Q8TE68 723 aa11.63□□□□□ -0.55
RIF1-211ENST00000494333 LAMC1P11047 1609 aa11.63□□□□□ -0.55
RIF1-211ENST00000494333 DLC1Q96QB1 1528 aa11.62□□□□□ -0.55
RIF1-211ENST00000494333 WASLO00401 505 aaPredicted RBP11.62□□□□□ -0.55
RIF1-211ENST00000494333 NBPF1Q3BBV0 1214 aa11.62□□□□□ -0.55
RIF1-211ENST00000494333 L3MBTL2Q969R5 705 aa11.62□□□□□ -0.55
RIF1-211ENST00000494333 PXDNQ92626 1479 aa11.62□□□□□ -0.55
RIF1-211ENST00000494333 SPATA31A3Q5VYP0 1347 aa11.61□□□□□ -0.55
RIF1-211ENST00000494333 EMID1Q96A84 441 aaPredicted RBP11.61□□□□□ -0.55
RIF1-211ENST00000494333 GJD4Q96KN9 370 aaPredicted RBP11.61□□□□□ -0.55
RIF1-211ENST00000494333 TRIM34Q9BYJ4 488 aa11.61□□□□□ -0.55
RIF1-211ENST00000494333 USP21Q9UK80 565 aa11.61□□□□□ -0.55
RIF1-211ENST00000494333 RBM6P78332 1123 aaKnown RBP11.6□□□□□ -0.55
RIF1-211ENST00000494333 FNBP4Q8N3X1 1017 aaPredicted RBP11.6□□□□□ -0.55
RIF1-211ENST00000494333 UNC93B1Q9H1C4 597 aa11.59□□□□□ -0.55
RIF1-211ENST00000494333 PRR36Q9H6K5 1346 aa11.59□□□□□ -0.55
RIF1-211ENST00000494333 FMN2Q9NZ56 1722 aa11.58□□□□□ -0.56
RIF1-211ENST00000494333 ZBTB24O43167 697 aaPredicted RBP11.58□□□□□ -0.56
RIF1-211ENST00000494333 LIAT1Q6ZQX7 453 aa11.58□□□□□ -0.56
RIF1-211ENST00000494333 NGDNQ8NEJ9 315 aaKnown RBP11.58□□□□□ -0.56
RIF1-211ENST00000494333 CDK19Q9BWU1 502 aa11.58□□□□□ -0.56
RIF1-211ENST00000494333 TRPC5Q9UL62 973 aaPredicted RBP11.58□□□□□ -0.56
RIF1-211ENST00000494333 ANKARQ7Z5J8 1434 aa11.58□□□□□ -0.56
RIF1-211ENST00000494333 TRIM26Q12899 539 aaPredicted RBP11.57□□□□□ -0.56
RIF1-211ENST00000494333 NUDT16Q96DE0 195 aaKnown RBP11.57□□□□□ -0.56
RIF1-211ENST00000494333 EIF3AQ14152 1382 aaKnown RBP11.56□□□□□ -0.56
RIF1-211ENST00000494333 GPRASP1Q5JY77 1395 aa11.56□□□□□ -0.56
RIF1-211ENST00000494333 APBB1O00213 710 aa11.56□□□□□ -0.56
RIF1-211ENST00000494333 SLC19A1P41440 591 aa11.56□□□□□ -0.56
RIF1-211ENST00000494333 RPIAP49247 311 aa11.56□□□□□ -0.56
RIF1-211ENST00000494333 SBNO1A3KN83 1393 aa11.55□□□□□ -0.56
RIF1-211ENST00000494333 TNS3Q68CZ2 1445 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms