RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 U2AF1L5P0DN76 240 aaPredicted RBP17.93■□□□□ 0.46
CTDSP1-212ENST00000494067 U2AF1Q01081 240 aaKnown RBP eCLIP17.93■□□□□ 0.46
CTDSP1-212ENST00000494067 TEFQ10587 303 aa17.93■□□□□ 0.46
CTDSP1-212ENST00000494067 BCL2L12Q9HB09 334 aa17.93■□□□□ 0.46
CTDSP1-212ENST00000494067 ADCY9O60503 1353 aa17.92■□□□□ 0.46
CTDSP1-212ENST00000494067 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
CTDSP1-212ENST00000494067 GIGYF1O75420 1035 aaPredicted RBP17.92■□□□□ 0.46
CTDSP1-212ENST00000494067 USPL1Q5W0Q7 1092 aa17.92■□□□□ 0.46
CTDSP1-212ENST00000494067 ZNF790Q6PG37 636 aa17.92■□□□□ 0.46
CTDSP1-212ENST00000494067 HEG1Q9ULI3 1381 aa17.91■□□□□ 0.46
CTDSP1-212ENST00000494067 KCNA3P22001 575 aa17.91■□□□□ 0.46
CTDSP1-212ENST00000494067 TM4SF1P30408 202 aa17.91■□□□□ 0.46
CTDSP1-212ENST00000494067 DCTN1Q14203 1278 aa17.91■□□□□ 0.46
CTDSP1-212ENST00000494067 VSIG10Q8N0Z9 540 aa17.91■□□□□ 0.46
CTDSP1-212ENST00000494067 POLRMTO00411 1230 aaKnown RBP17.9■□□□□ 0.46
CTDSP1-212ENST00000494067 DPEP1P16444 411 aa17.9■□□□□ 0.46
CTDSP1-212ENST00000494067 MCM10Q7L590 875 aa17.9■□□□□ 0.46
CTDSP1-212ENST00000494067 ARFGEF1Q9Y6D6 1849 aa17.9■□□□□ 0.46
CTDSP1-212ENST00000494067 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
CTDSP1-212ENST00000494067 PRAMEF22A3QJZ6 481 aa17.89■□□□□ 0.45
CTDSP1-212ENST00000494067 STARD3NLO95772 234 aa17.89■□□□□ 0.45
CTDSP1-212ENST00000494067 CANXP27824 592 aaKnown RBP17.89■□□□□ 0.45
CTDSP1-212ENST00000494067 C1QTNF8P60827 252 aa17.89■□□□□ 0.45
CTDSP1-212ENST00000494067 ATP10DQ9P241 1426 aa17.89■□□□□ 0.45
CTDSP1-212ENST00000494067 FCHSD2O94868 740 aa17.88■□□□□ 0.45
CTDSP1-212ENST00000494067 TEX13AQ9BXU3 409 aaPredicted RBP17.88■□□□□ 0.45
CTDSP1-212ENST00000494067 BCS1LQ9Y276 419 aa17.88■□□□□ 0.45
CTDSP1-212ENST00000494067 KDM3BQ7LBC6 1761 aa17.88■□□□□ 0.45
CTDSP1-212ENST00000494067 DLEC1Q9Y238 1755 aa17.88■□□□□ 0.45
CTDSP1-212ENST00000494067 ANKRD31Q8N7Z5 1873 aa17.87■□□□□ 0.45
CTDSP1-212ENST00000494067 EIF5P55010 431 aaKnown RBP17.87■□□□□ 0.45
CTDSP1-212ENST00000494067 NFIXQ14938 502 aa17.87■□□□□ 0.45
CTDSP1-212ENST00000494067 NPM2Q86SE8 214 aaKnown RBP17.87■□□□□ 0.45
CTDSP1-212ENST00000494067 PLEKHF1Q96S99 279 aa17.87■□□□□ 0.45
CTDSP1-212ENST00000494067 NARFQ9UHQ1 456 aa17.87■□□□□ 0.45
CTDSP1-212ENST00000494067 CARMIL3Q8ND23 1372 aa17.87■□□□□ 0.45
CTDSP1-212ENST00000494067 NEFMP07197 916 aa17.86■□□□□ 0.45
CTDSP1-212ENST00000494067 RTF1Q92541 710 aaKnown RBP17.86■□□□□ 0.45
CTDSP1-212ENST00000494067 GPBP1L1Q9HC44 474 aaPredicted RBP17.86■□□□□ 0.45
CTDSP1-212ENST00000494067 LAMB4A4D0S4 1761 aa17.85■□□□□ 0.45
CTDSP1-212ENST00000494067 BTBD11A6QL63 1104 aa17.85■□□□□ 0.45
CTDSP1-212ENST00000494067 A1BGP04217 495 aa17.85■□□□□ 0.45
CTDSP1-212ENST00000494067 CHRNA5P30532 468 aa17.85■□□□□ 0.45
CTDSP1-212ENST00000494067 PIP4K2AP48426 406 aaPredicted RBP17.85■□□□□ 0.45
CTDSP1-212ENST00000494067 COL11A2P13942 1736 aaPredicted RBP17.84■□□□□ 0.45
CTDSP1-212ENST00000494067 A0A087WZG4 1122 aa17.84■□□□□ 0.45
CTDSP1-212ENST00000494067 SENP3-EIF4A1A0A087X0R7 540 aa17.84■□□□□ 0.45
CTDSP1-212ENST00000494067 FMNL2Q96PY5 1086 aa17.84■□□□□ 0.45
CTDSP1-212ENST00000494067 PIM2Q9P1W9 311 aa17.84■□□□□ 0.45
CTDSP1-212ENST00000494067 USP16Q9Y5T5 823 aa17.84■□□□□ 0.45
CTDSP1-212ENST00000494067 ARHGAP27Q6ZUM4 889 aa17.83■□□□□ 0.44
CTDSP1-212ENST00000494067 MIS18AQ9NYP9 233 aa17.82■□□□□ 0.44
CTDSP1-212ENST00000494067 DDX10Q13206 875 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-212ENST00000494067 TBC1D9BQ66K14 1250 aa17.81■□□□□ 0.44
CTDSP1-212ENST00000494067 ZNF526Q8TF50 670 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-212ENST00000494067 THUMPD2Q9BTF0 503 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-212ENST00000494067 TBC1D2BQ9UPU7 963 aa17.81■□□□□ 0.44
CTDSP1-212ENST00000494067 DALRD3Q5D0E6 543 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-212ENST00000494067 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-212ENST00000494067 HTATSF1O43719 755 aaKnown RBP17.79■□□□□ 0.44
CTDSP1-212ENST00000494067 SERPINB2P05120 415 aa17.79■□□□□ 0.44
CTDSP1-212ENST00000494067 BICDL1Q6ZP65 573 aa17.79■□□□□ 0.44
CTDSP1-212ENST00000494067 SBF1O95248 1867 aa17.79■□□□□ 0.44
CTDSP1-212ENST00000494067 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
CTDSP1-212ENST00000494067 CAMTA2O94983 1202 aa17.78■□□□□ 0.44
CTDSP1-212ENST00000494067 IL6STP40189 918 aaPredicted RBP17.78■□□□□ 0.44
CTDSP1-212ENST00000494067 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-212ENST00000494067 CCDC24Q8N4L8 307 aa17.78■□□□□ 0.44
CTDSP1-212ENST00000494067 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
CTDSP1-212ENST00000494067 PNNQ9H307 717 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-212ENST00000494067 CACNA1SQ13698 1873 aa17.76■□□□□ 0.43
CTDSP1-212ENST00000494067 NFE2L2Q16236 605 aa17.76■□□□□ 0.43
CTDSP1-212ENST00000494067 NPHP1O15259 732 aa17.75■□□□□ 0.43
CTDSP1-212ENST00000494067 PRELPP51888 382 aa17.75■□□□□ 0.43
CTDSP1-212ENST00000494067 TAF7Q15545 349 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-212ENST00000494067 SNRPA1P09661 255 aaKnown RBP17.74■□□□□ 0.43
CTDSP1-212ENST00000494067 RALBP1Q15311 655 aa17.74■□□□□ 0.43
CTDSP1-212ENST00000494067 H0YIN7 160 aa17.73■□□□□ 0.43
CTDSP1-212ENST00000494067 PRR5LQ6MZQ0 368 aa17.73■□□□□ 0.43
CTDSP1-212ENST00000494067 DZIP3Q86Y13 1208 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-212ENST00000494067 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-212ENST00000494067 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
CTDSP1-212ENST00000494067 MYBBP1AQ9BQG0 1328 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-212ENST00000494067 CCDC88AQ3V6T2 1871 aa17.71■□□□□ 0.43
CTDSP1-212ENST00000494067 ARFGEF2Q9Y6D5 1785 aa17.71■□□□□ 0.43
CTDSP1-212ENST00000494067 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-212ENST00000494067 KIF3CO14782 793 aa17.71■□□□□ 0.43
CTDSP1-212ENST00000494067 EIF4A1P60842 406 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-212ENST00000494067 RASSF7Q02833 373 aa17.71■□□□□ 0.43
CTDSP1-212ENST00000494067 C9orf131Q5VYM1 1079 aa17.71■□□□□ 0.43
CTDSP1-212ENST00000494067 C2CD5Q86YS7 1000 aa17.71■□□□□ 0.43
CTDSP1-212ENST00000494067 SETDB2Q96T68 719 aa17.71■□□□□ 0.43
CTDSP1-212ENST00000494067 TIAM2Q8IVF5 1701 aa17.71■□□□□ 0.43
CTDSP1-212ENST00000494067 MAPK8IP3Q9UPT6 1336 aa17.71■□□□□ 0.42
CTDSP1-212ENST00000494067 PDE6BP35913 854 aa17.7■□□□□ 0.42
CTDSP1-212ENST00000494067 TTLL6Q8N841 843 aa17.7■□□□□ 0.42
CTDSP1-212ENST00000494067 ZNF652Q9Y2D9 606 aa17.7■□□□□ 0.42
CTDSP1-212ENST00000494067 NUP98P52948 1817 aa17.7■□□□□ 0.42
CTDSP1-212ENST00000494067 SLX4Q8IY92 1834 aa17.7■□□□□ 0.42
CTDSP1-212ENST00000494067 HLFQ16534 295 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms