RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 TGFB2P61812 414 aa13.03□□□□□ -0.32
UFD1-210ENST00000494054 MCM10Q7L590 875 aa13.03□□□□□ -0.32
UFD1-210ENST00000494054 BCL2L12Q9HB09 334 aa13.03□□□□□ -0.32
UFD1-210ENST00000494054 KIF13BQ9NQT8 1826 aa13.03□□□□□ -0.32
UFD1-210ENST00000494054 HEG1Q9ULI3 1381 aa13.03□□□□□ -0.32
UFD1-210ENST00000494054 BTBD11A6QL63 1104 aa13.02□□□□□ -0.33
UFD1-210ENST00000494054 ZPR1O75312 459 aa13.02□□□□□ -0.33
UFD1-210ENST00000494054 DCTN1Q14203 1278 aa13.02□□□□□ -0.33
UFD1-210ENST00000494054 NARFQ9UHQ1 456 aa13.02□□□□□ -0.33
UFD1-210ENST00000494054 COL15A1P39059 1388 aa13.02□□□□□ -0.33
UFD1-210ENST00000494054 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
UFD1-210ENST00000494054 POLRMTO00411 1230 aaKnown RBP13.01□□□□□ -0.33
UFD1-210ENST00000494054 STARD3NLO95772 234 aa13.01□□□□□ -0.33
UFD1-210ENST00000494054 EIF5P55010 431 aaKnown RBP13.01□□□□□ -0.33
UFD1-210ENST00000494054 N4BP2Q86UW6 1770 aaPredicted RBP13.01□□□□□ -0.33
UFD1-210ENST00000494054 A1BGP04217 495 aa13□□□□□ -0.33
UFD1-210ENST00000494054 KCNA3P22001 575 aa13□□□□□ -0.33
UFD1-210ENST00000494054 DDX10Q13206 875 aaKnown RBP13□□□□□ -0.33
UFD1-210ENST00000494054 NFIXQ14938 502 aa13□□□□□ -0.33
UFD1-210ENST00000494054 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
UFD1-210ENST00000494054 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
UFD1-210ENST00000494054 PRAMEF22A3QJZ6 481 aa12.99□□□□□ -0.33
UFD1-210ENST00000494054 HTATSF1O43719 755 aaKnown RBP12.99□□□□□ -0.33
UFD1-210ENST00000494054 PLEKHF1Q96S99 279 aa12.99□□□□□ -0.33
UFD1-210ENST00000494054 TEX13AQ9BXU3 409 aaPredicted RBP12.99□□□□□ -0.33
UFD1-210ENST00000494054 BCS1LQ9Y276 419 aa12.99□□□□□ -0.33
UFD1-210ENST00000494054 USP16Q9Y5T5 823 aa12.99□□□□□ -0.33
UFD1-210ENST00000494054 ATP10DQ9P241 1426 aa12.97□□□□□ -0.33
UFD1-210ENST00000494054 A0A087WZG4 1122 aa12.97□□□□□ -0.33
UFD1-210ENST00000494054 CHRNA5P30532 468 aa12.97□□□□□ -0.33
UFD1-210ENST00000494054 IL6STP40189 918 aaPredicted RBP12.97□□□□□ -0.33
UFD1-210ENST00000494054 MIS18AQ9NYP9 233 aa12.97□□□□□ -0.33
UFD1-210ENST00000494054 TBC1D2BQ9UPU7 963 aa12.97□□□□□ -0.33
UFD1-210ENST00000494054 ZNF330Q9Y3S2 320 aaPredicted RBP12.97□□□□□ -0.33
UFD1-210ENST00000494054 ADCY9O60503 1353 aa12.96□□□□□ -0.33
UFD1-210ENST00000494054 SERPINB2P05120 415 aa12.96□□□□□ -0.33
UFD1-210ENST00000494054 PIP4K2AP48426 406 aaPredicted RBP12.96□□□□□ -0.33
UFD1-210ENST00000494054 RALBP1Q15311 655 aa12.96□□□□□ -0.33
UFD1-210ENST00000494054 TAF7Q15545 349 aaPredicted RBP12.96□□□□□ -0.33
UFD1-210ENST00000494054 BICDL1Q6ZP65 573 aa12.96□□□□□ -0.33
UFD1-210ENST00000494054 PIM2Q9P1W9 311 aa12.96□□□□□ -0.33
UFD1-210ENST00000494054 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
UFD1-210ENST00000494054 NFE2L2Q16236 605 aa12.95□□□□□ -0.34
UFD1-210ENST00000494054 TBC1D9BQ66K14 1250 aa12.95□□□□□ -0.34
UFD1-210ENST00000494054 ARHGAP27Q6ZUM4 889 aa12.95□□□□□ -0.34
UFD1-210ENST00000494054 BRCA1P38398 1863 aaKnown RBP12.95□□□□□ -0.34
UFD1-210ENST00000494054 AFDNP55196 1824 aaKnown RBP12.95□□□□□ -0.34
UFD1-210ENST00000494054 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
UFD1-210ENST00000494054 CAMTA2O94983 1202 aa12.94□□□□□ -0.34
UFD1-210ENST00000494054 NEFMP07197 916 aa12.94□□□□□ -0.34
UFD1-210ENST00000494054 SNRPA1P09661 255 aaKnown RBP12.94□□□□□ -0.34
UFD1-210ENST00000494054 DALRD3Q5D0E6 543 aaKnown RBP12.94□□□□□ -0.34
UFD1-210ENST00000494054 THUMPD2Q9BTF0 503 aaKnown RBP12.94□□□□□ -0.34
UFD1-210ENST00000494054 CARMIL3Q8ND23 1372 aa12.94□□□□□ -0.34
UFD1-210ENST00000494054 NRXN2Q9P2S2 1712 aa12.93□□□□□ -0.34
UFD1-210ENST00000494054 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
UFD1-210ENST00000494054 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
UFD1-210ENST00000494054 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
UFD1-210ENST00000494054 ZNF526Q8TF50 670 aaPredicted RBP12.93□□□□□ -0.34
UFD1-210ENST00000494054 DLG5Q8TDM6 1919 aa12.93□□□□□ -0.34
UFD1-210ENST00000494054 DZIP3Q86Y13 1208 aaKnown RBP12.92□□□□□ -0.34
UFD1-210ENST00000494054 CCDC24Q8N4L8 307 aa12.92□□□□□ -0.34
UFD1-210ENST00000494054 GPBP1L1Q9HC44 474 aaPredicted RBP12.92□□□□□ -0.34
UFD1-210ENST00000494054 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
UFD1-210ENST00000494054 MAPK8IP3Q9UPT6 1336 aa12.91□□□□□ -0.34
UFD1-210ENST00000494054 PNNQ9H307 717 aaKnown RBP12.91□□□□□ -0.34
UFD1-210ENST00000494054 SCN7AQ01118 1682 aa12.91□□□□□ -0.34
UFD1-210ENST00000494054 PRR5LQ6MZQ0 368 aa12.9□□□□□ -0.34
UFD1-210ENST00000494054 NPM2Q86SE8 214 aaKnown RBP12.9□□□□□ -0.34
UFD1-210ENST00000494054 C2CD5Q86YS7 1000 aa12.9□□□□□ -0.34
UFD1-210ENST00000494054 ARFGEF1Q9Y6D6 1849 aa12.9□□□□□ -0.34
UFD1-210ENST00000494054 RIPK4P57078 832 aa12.89□□□□□ -0.35
UFD1-210ENST00000494054 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
UFD1-210ENST00000494054 C9orf131Q5VYM1 1079 aa12.89□□□□□ -0.35
UFD1-210ENST00000494054 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
UFD1-210ENST00000494054 SETDB2Q96T68 719 aa12.89□□□□□ -0.35
UFD1-210ENST00000494054 KDM3BQ7LBC6 1761 aa12.89□□□□□ -0.35
UFD1-210ENST00000494054 H0YIN7 160 aa12.88□□□□□ -0.35
UFD1-210ENST00000494054 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
UFD1-210ENST00000494054 BRIP1Q9BX63 1249 aa12.88□□□□□ -0.35
UFD1-210ENST00000494054 ANKRD31Q8N7Z5 1873 aa12.87□□□□□ -0.35
UFD1-210ENST00000494054 BCORQ6W2J9 1755 aa12.87□□□□□ -0.35
UFD1-210ENST00000494054 SENP3-EIF4A1A0A087X0R7 540 aa12.87□□□□□ -0.35
UFD1-210ENST00000494054 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
UFD1-210ENST00000494054 CLEC4GQ6UXB4 293 aa12.87□□□□□ -0.35
UFD1-210ENST00000494054 CCDC146Q8IYE0 955 aa12.87□□□□□ -0.35
UFD1-210ENST00000494054 TTLL6Q8N841 843 aa12.87□□□□□ -0.35
UFD1-210ENST00000494054 RRP7AQ9Y3A4 280 aaKnown RBP12.87□□□□□ -0.35
UFD1-210ENST00000494054 KIF3CO14782 793 aa12.86□□□□□ -0.35
UFD1-210ENST00000494054 PDE6BP35913 854 aa12.86□□□□□ -0.35
UFD1-210ENST00000494054 PRELPP51888 382 aa12.86□□□□□ -0.35
UFD1-210ENST00000494054 HLFQ16534 295 aa12.86□□□□□ -0.35
UFD1-210ENST00000494054 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
UFD1-210ENST00000494054 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
UFD1-210ENST00000494054 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
UFD1-210ENST00000494054 DLEC1Q9Y238 1755 aa12.86□□□□□ -0.35
UFD1-210ENST00000494054 RASSF7Q02833 373 aa12.85□□□□□ -0.35
UFD1-210ENST00000494054 ZNF622Q969S3 477 aaKnown RBP eCLIP12.85□□□□□ -0.35
UFD1-210ENST00000494054 RNF181Q9P0P0 153 aa12.85□□□□□ -0.35
UFD1-210ENST00000494054 TSPYL4Q9UJ04 414 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms