RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 DBF4Q9UBU7 674 aaPredicted RBP19.13■□□□□ 0.65
ACTB-213ENST00000493945 C4BP0C0L5 1744 aa19.13■□□□□ 0.65
ACTB-213ENST00000493945 EN1Q05925 392 aaPredicted RBP19.12■□□□□ 0.65
ACTB-213ENST00000493945 RC3H1Q5TC82 1133 aaKnown RBP19.11■□□□□ 0.65
ACTB-213ENST00000493945 NBPF14Q5TI25 921 aa19.11■□□□□ 0.65
ACTB-213ENST00000493945 CCDC87Q9NVE4 849 aa19.11■□□□□ 0.65
ACTB-213ENST00000493945 VAMP4O75379 141 aa19.1■□□□□ 0.65
ACTB-213ENST00000493945 ILDR2Q71H61 639 aa19.1■□□□□ 0.65
ACTB-213ENST00000493945 CAMKK2Q96RR4 588 aa19.1■□□□□ 0.65
ACTB-213ENST00000493945 HYPKQ9NX55 129 aa19.1■□□□□ 0.65
ACTB-213ENST00000493945 NUP188Q5SRE5 1749 aa19.09■□□□□ 0.65
ACTB-213ENST00000493945 KIF16BQ96L93 1317 aa19.09■□□□□ 0.65
ACTB-213ENST00000493945 A0A087WZG4 1122 aa19.09■□□□□ 0.65
ACTB-213ENST00000493945 CYP19A1P11511 503 aaPredicted RBP19.09■□□□□ 0.65
ACTB-213ENST00000493945 CRKLP46109 303 aaKnown RBP19.09■□□□□ 0.65
ACTB-213ENST00000493945 KRT24Q2M2I5 525 aa19.09■□□□□ 0.65
ACTB-213ENST00000493945 TSPYL6Q8N831 410 aa19.09■□□□□ 0.65
ACTB-213ENST00000493945 DDX21Q9NR30 783 aaKnown RBP eCLIP19.09■□□□□ 0.65
ACTB-213ENST00000493945 SMC4Q9NTJ3 1288 aa19.09■□□□□ 0.65
ACTB-213ENST00000493945 STK32BQ9NY57 414 aa19.09■□□□□ 0.65
ACTB-213ENST00000493945 ITPK1Q13572 414 aa19.08■□□□□ 0.64
ACTB-213ENST00000493945 EZH2Q15910 746 aaKnown RBP19.08■□□□□ 0.64
ACTB-213ENST00000493945 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.08■□□□□ 0.64
ACTB-213ENST00000493945 FLAD1Q8NFF5 587 aa19.08■□□□□ 0.64
ACTB-213ENST00000493945 SLC4A9Q96Q91 983 aa19.08■□□□□ 0.64
ACTB-213ENST00000493945 RTCBQ9Y3I0 505 aaKnown RBP19.08■□□□□ 0.64
ACTB-213ENST00000493945 USP16Q9Y5T5 823 aa19.08■□□□□ 0.64
ACTB-213ENST00000493945 DDX58O95786 925 aaKnown RBP19.07■□□□□ 0.64
ACTB-213ENST00000493945 ADRA2BP18089 450 aa19.07■□□□□ 0.64
ACTB-213ENST00000493945 IL6STP40189 918 aaPredicted RBP19.07■□□□□ 0.64
ACTB-213ENST00000493945 DEFB132Q7Z7B7 95 aa19.07■□□□□ 0.64
ACTB-213ENST00000493945 LINC00116Q8NCU8 138 aa19.07■□□□□ 0.64
ACTB-213ENST00000493945 RCAN3Q9UKA8 241 aa19.07■□□□□ 0.64
ACTB-213ENST00000493945 GNPATO15228 680 aa19.06■□□□□ 0.64
ACTB-213ENST00000493945 CANXP27824 592 aaKnown RBP19.06■□□□□ 0.64
ACTB-213ENST00000493945 NECTIN2Q92692 538 aa19.06■□□□□ 0.64
ACTB-213ENST00000493945 CHPF2Q9P2E5 772 aa19.06■□□□□ 0.64
ACTB-213ENST00000493945 PRAMEF22A3QJZ6 481 aa19.05■□□□□ 0.64
ACTB-213ENST00000493945 IPO8O15397 1037 aaKnown RBP19.05■□□□□ 0.64
ACTB-213ENST00000493945 KIF6Q6ZMV9 814 aa19.05■□□□□ 0.64
ACTB-213ENST00000493945 LRRC4BQ9NT99 713 aa19.05■□□□□ 0.64
ACTB-213ENST00000493945 ZNF330Q9Y3S2 320 aaPredicted RBP19.05■□□□□ 0.64
ACTB-213ENST00000493945 QSER1Q2KHR3 1735 aa19.05■□□□□ 0.64
ACTB-213ENST00000493945 SSFA2P28290 1259 aa19.04■□□□□ 0.64
ACTB-213ENST00000493945 UBR3Q6ZT12 1888 aa19.04■□□□□ 0.64
ACTB-213ENST00000493945 TFCP2L1Q9NZI6 479 aa19.04■□□□□ 0.64
ACTB-213ENST00000493945 ZBTB1Q9Y2K1 713 aa19.04■□□□□ 0.64
ACTB-213ENST00000493945 MYH14Q7Z406 1995 aaKnown RBP19.04■□□□□ 0.64
ACTB-213ENST00000493945 COL15A1P39059 1388 aa19.04■□□□□ 0.64
ACTB-213ENST00000493945 PTPRCP08575 1304 aa19.03■□□□□ 0.64
ACTB-213ENST00000493945 RPS6KA4O75676 772 aa19.03■□□□□ 0.64
ACTB-213ENST00000493945 SLC4A2P04920 1241 aa19.03■□□□□ 0.64
ACTB-213ENST00000493945 MYL6BP14649 208 aa19.03■□□□□ 0.64
ACTB-213ENST00000493945 RARSP54136 660 aaKnown RBP19.03■□□□□ 0.64
ACTB-213ENST00000493945 A1BGP04217 495 aa19.02■□□□□ 0.64
ACTB-213ENST00000493945 MS4A1P11836 297 aa19.02■□□□□ 0.64
ACTB-213ENST00000493945 BRPF1P55201 1214 aaPredicted RBP19.02■□□□□ 0.64
ACTB-213ENST00000493945 KCNQ4P56696 695 aa19.02■□□□□ 0.64
ACTB-213ENST00000493945 PROM2Q8N271 834 aa19.02■□□□□ 0.64
ACTB-213ENST00000493945 ZNF652Q9Y2D9 606 aa19.02■□□□□ 0.64
ACTB-213ENST00000493945 TRAPPC3LQ5T215 181 aa19.01■□□□□ 0.63
ACTB-213ENST00000493945 INTS5Q6P9B9 1019 aaKnown RBP19.01■□□□□ 0.63
ACTB-213ENST00000493945 SSH1Q8WYL5 1049 aa19.01■□□□□ 0.63
ACTB-213ENST00000493945 ZPR1O75312 459 aa19■□□□□ 0.63
ACTB-213ENST00000493945 RFC4P35249 363 aa19■□□□□ 0.63
ACTB-213ENST00000493945 FKBP5Q13451 457 aaPredicted RBP19■□□□□ 0.63
ACTB-213ENST00000493945 ARXQ96QS3 562 aa19■□□□□ 0.63
ACTB-213ENST00000493945 API5Q9BZZ5 524 aaKnown RBP19■□□□□ 0.63
ACTB-213ENST00000493945 RGL2O15211 777 aa18.99■□□□□ 0.63
ACTB-213ENST00000493945 EIF5P55010 431 aaKnown RBP18.99■□□□□ 0.63
ACTB-213ENST00000493945 FLIIQ13045 1269 aa18.99■□□□□ 0.63
ACTB-213ENST00000493945 SLC15A2Q16348 729 aa18.99■□□□□ 0.63
ACTB-213ENST00000493945 BCL2L13Q9BXK5 485 aa18.99■□□□□ 0.63
ACTB-213ENST00000493945 HSP90AB3PQ58FF7 597 aa18.98■□□□□ 0.63
ACTB-213ENST00000493945 DZIP3Q86Y13 1208 aaKnown RBP18.98■□□□□ 0.63
ACTB-213ENST00000493945 MRPL50Q8N5N7 158 aaKnown RBP18.98■□□□□ 0.63
ACTB-213ENST00000493945 AKT1S1Q96B36 256 aa18.98■□□□□ 0.63
ACTB-213ENST00000493945 SCN7AQ01118 1682 aa18.98■□□□□ 0.63
ACTB-213ENST00000493945 BCORQ6W2J9 1755 aa18.97■□□□□ 0.63
ACTB-213ENST00000493945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.97■□□□□ 0.63
ACTB-213ENST00000493945 NBPF26B4DH59 902 aa18.97■□□□□ 0.63
ACTB-213ENST00000493945 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
ACTB-213ENST00000493945 PHF14O94880 888 aa18.97■□□□□ 0.63
ACTB-213ENST00000493945 NEXNQ0ZGT2 675 aa18.97■□□□□ 0.63
ACTB-213ENST00000493945 AIMP1Q12904 312 aaKnown RBP18.97■□□□□ 0.63
ACTB-213ENST00000493945 PDIA6Q15084 440 aa18.97■□□□□ 0.63
ACTB-213ENST00000493945 ZKSCAN2Q63HK3 967 aa18.97■□□□□ 0.63
ACTB-213ENST00000493945 NBPF10Q6P3W6 841 aaKnown RBP18.97■□□□□ 0.63
ACTB-213ENST00000493945 NBPF15Q8N660 670 aa18.97■□□□□ 0.63
ACTB-213ENST00000493945 XAGE3Q8WTP9 111 aa18.97■□□□□ 0.63
ACTB-213ENST00000493945 ARHGAP45Q92619 1136 aa18.97■□□□□ 0.63
ACTB-213ENST00000493945 TUBGCP6Q96RT7 1819 aa18.97■□□□□ 0.63
ACTB-213ENST00000493945 C4AP0C0L4 1744 aa18.97■□□□□ 0.63
ACTB-213ENST00000493945 MSH5O43196 834 aa18.96■□□□□ 0.63
ACTB-213ENST00000493945 COPS6Q7L5N1 327 aa18.96■□□□□ 0.63
ACTB-213ENST00000493945 RIC3Q7Z5B4 369 aa18.96■□□□□ 0.63
ACTB-213ENST00000493945 FRAT1Q92837 279 aaPredicted RBP18.96■□□□□ 0.63
ACTB-213ENST00000493945 ERVV-1B6SEH8 477 aa18.95■□□□□ 0.62
ACTB-213ENST00000493945 SOCS7O14512 581 aa18.95■□□□□ 0.62
ACTB-213ENST00000493945 PIP4K2AP48426 406 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms