RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TSEN2Q8NCE0 465 aaKnown RBP8.68□□□□□ -1.02
ITGB1-216ENST00000493758 CRISPLD1Q9H336 500 aa8.68□□□□□ -1.02
ITGB1-216ENST00000493758 NOVA2Q9UNW9 492 aaKnown RBP8.68□□□□□ -1.02
ITGB1-216ENST00000493758 GPC6Q9Y625 555 aaPredicted RBP8.68□□□□□ -1.02
ITGB1-216ENST00000493758 WIPF1O43516 503 aa8.67□□□□□ -1.02
ITGB1-216ENST00000493758 RFX1P22670 979 aa8.67□□□□□ -1.02
ITGB1-216ENST00000493758 PLA2G4AP47712 749 aa8.67□□□□□ -1.02
ITGB1-216ENST00000493758 ERBB4Q15303 1308 aa8.67□□□□□ -1.02
ITGB1-216ENST00000493758 ZDHHC1Q8WTX9 485 aa8.67□□□□□ -1.02
ITGB1-216ENST00000493758 TSPAN10Q9H1Z9 355 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-216ENST00000493758 ACIN1Q9UKV3 1341 aaKnown RBP8.67□□□□□ -1.02
ITGB1-216ENST00000493758 H7C1W4 665 aa8.66□□□□□ -1.02
ITGB1-216ENST00000493758 C21orf2O43822 256 aa8.66□□□□□ -1.02
ITGB1-216ENST00000493758 NBPF1Q3BBV0 1214 aa8.66□□□□□ -1.02
ITGB1-216ENST00000493758 ZNF837Q96EG3 531 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-216ENST00000493758 CUEDC1Q9NWM3 386 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-216ENST00000493758 EML1O00423 815 aa8.65□□□□□ -1.02
ITGB1-216ENST00000493758 IGFBP4P22692 258 aa8.65□□□□□ -1.02
ITGB1-216ENST00000493758 FAM69CQ0P6D2 419 aa8.65□□□□□ -1.02
ITGB1-216ENST00000493758 FAM200AQ8TCP9 573 aa8.65□□□□□ -1.02
ITGB1-216ENST00000493758 MSX1P28360 303 aa8.64□□□□□ -1.03
ITGB1-216ENST00000493758 WEE1P30291 646 aa8.64□□□□□ -1.03
ITGB1-216ENST00000493758 VEGFBP49765 207 aa8.64□□□□□ -1.03
ITGB1-216ENST00000493758 STK32AQ8WU08 396 aa8.64□□□□□ -1.03
ITGB1-216ENST00000493758 NOS2P35228 1153 aa8.63□□□□□ -1.03
ITGB1-216ENST00000493758 PHKA2P46019 1235 aa8.63□□□□□ -1.03
ITGB1-216ENST00000493758 CABP1Q9NZU7 370 aa8.63□□□□□ -1.03
ITGB1-216ENST00000493758 SERTM1A2A2V5 107 aa8.62□□□□□ -1.03
ITGB1-216ENST00000493758 FOXO3O43524 673 aa8.62□□□□□ -1.03
ITGB1-216ENST00000493758 THBS1P07996 1170 aa8.62□□□□□ -1.03
ITGB1-216ENST00000493758 UBAP2LQ14157 1087 aaKnown RBP8.62□□□□□ -1.03
ITGB1-216ENST00000493758 C1orf53Q5VUE5 145 aa8.62□□□□□ -1.03
ITGB1-216ENST00000493758 SV2AQ7L0J3 742 aa8.62□□□□□ -1.03
ITGB1-216ENST00000493758 L3MBTL2Q969R5 705 aa8.62□□□□□ -1.03
ITGB1-216ENST00000493758 C2orf49Q9BVC5 232 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-216ENST00000493758 TATP17735 454 aaPredicted RBP8.61□□□□□ -1.03
ITGB1-216ENST00000493758 OCLNQ16625 522 aa8.61□□□□□ -1.03
ITGB1-216ENST00000493758 DBN1Q16643 649 aa8.61□□□□□ -1.03
ITGB1-216ENST00000493758 TMEM164Q5U3C3 297 aa8.61□□□□□ -1.03
ITGB1-216ENST00000493758 NLRP8Q86W28 1048 aa8.61□□□□□ -1.03
ITGB1-216ENST00000493758 CLP1Q92989 425 aaKnown RBP8.61□□□□□ -1.03
ITGB1-216ENST00000493758 NUCKS1Q9H1E3 243 aaKnown RBP8.61□□□□□ -1.03
ITGB1-216ENST00000493758 CHMP3Q9Y3E7 222 aa8.61□□□□□ -1.03
ITGB1-216ENST00000493758 PPP1R12BO60237 982 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-216ENST00000493758 CSB-PGBD3P0DP91 1061 aa8.6□□□□□ -1.03
ITGB1-216ENST00000493758 CDCA8Q53HL2 280 aa8.6□□□□□ -1.03
ITGB1-216ENST00000493758 SAMD5Q5TGI4 173 aa8.6□□□□□ -1.03
ITGB1-216ENST00000493758 PGBD3Q8N328 593 aa8.6□□□□□ -1.03
ITGB1-216ENST00000493758 C7orf43Q8WVR3 580 aa8.6□□□□□ -1.03
ITGB1-216ENST00000493758 GAS2L1Q99501 681 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-216ENST00000493758 ATAD2Q6PL18 1390 aa8.6□□□□□ -1.03
ITGB1-216ENST00000493758 SUPT5HO00267 1087 aaKnown RBP8.59□□□□□ -1.03
ITGB1-216ENST00000493758 GMPRP36959 345 aa8.59□□□□□ -1.03
ITGB1-216ENST00000493758 EFHC2Q5JST6 749 aa8.59□□□□□ -1.03
ITGB1-216ENST00000493758 RIPOR1Q6ZS17 1223 aa8.59□□□□□ -1.03
ITGB1-216ENST00000493758 SCG3Q8WXD2 468 aaKnown RBP8.59□□□□□ -1.03
ITGB1-216ENST00000493758 GPAMQ9HCL2 828 aa8.59□□□□□ -1.03
ITGB1-216ENST00000493758 TXLNAP40222 546 aa8.58□□□□□ -1.04
ITGB1-216ENST00000493758 TBCELQ5QJ74 424 aa8.58□□□□□ -1.04
ITGB1-216ENST00000493758 FIGNL1Q6PIW4 674 aa8.58□□□□□ -1.04
ITGB1-216ENST00000493758 VWA5B2Q8N398 1253 aa8.58□□□□□ -1.04
ITGB1-216ENST00000493758 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
ITGB1-216ENST00000493758 COL26A1Q96A83 441 aa8.58□□□□□ -1.04
ITGB1-216ENST00000493758 HINFPQ9BQA5 517 aa8.58□□□□□ -1.04
ITGB1-216ENST00000493758 NDFIP2Q9NV92 336 aa8.58□□□□□ -1.04
ITGB1-216ENST00000493758 CDC14CA4D256 554 aa8.57□□□□□ -1.04
ITGB1-216ENST00000493758 GAS6Q14393 721 aa8.57□□□□□ -1.04
ITGB1-216ENST00000493758 FOXR1Q6PIV2 292 aa8.57□□□□□ -1.04
ITGB1-216ENST00000493758 CFHR5Q9BXR6 569 aa8.57□□□□□ -1.04
ITGB1-216ENST00000493758 RUBCNLQ9H714 662 aa8.57□□□□□ -1.04
ITGB1-216ENST00000493758 ZNF232Q9UNY5 417 aa8.57□□□□□ -1.04
ITGB1-216ENST00000493758 USTQ9Y2C2 406 aa8.57□□□□□ -1.04
ITGB1-216ENST00000493758 TMEM88BA6NKF7 163 aa8.56□□□□□ -1.04
ITGB1-216ENST00000493758 FAM157BP0CG42 384 aa8.56□□□□□ -1.04
ITGB1-216ENST00000493758 KRT76Q01546 638 aa8.56□□□□□ -1.04
ITGB1-216ENST00000493758 SH3PXD2AQ5TCZ1 1133 aa8.56□□□□□ -1.04
ITGB1-216ENST00000493758 TRERF1Q96PN7 1200 aa8.56□□□□□ -1.04
ITGB1-216ENST00000493758 ZIC5Q96T25 663 aa8.56□□□□□ -1.04
ITGB1-216ENST00000493758 ATXN7L1Q9ULK2 861 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-216ENST00000493758 A0A1W2PNR3 127 aa8.55□□□□□ -1.04
ITGB1-216ENST00000493758 HIF1AQ16665 826 aa8.55□□□□□ -1.04
ITGB1-216ENST00000493758 RTN1Q16799 776 aa8.55□□□□□ -1.04
ITGB1-216ENST00000493758 GTPBP3Q969Y2 492 aaKnown RBP8.55□□□□□ -1.04
ITGB1-216ENST00000493758 AIDAQ96BJ3 306 aa8.55□□□□□ -1.04
ITGB1-216ENST00000493758 MYO19Q96H55 970 aa8.55□□□□□ -1.04
ITGB1-216ENST00000493758 CXXC1Q9P0U4 656 aaPredicted RBP8.55□□□□□ -1.04
ITGB1-216ENST00000493758 PARP3Q9Y6F1 533 aa8.55□□□□□ -1.04
ITGB1-216ENST00000493758 RNFT1Q5M7Z0 435 aa8.54□□□□□ -1.04
ITGB1-216ENST00000493758 COL25A1Q9BXS0 654 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-216ENST00000493758 PHACTR1Q9C0D0 580 aa8.54□□□□□ -1.04
ITGB1-216ENST00000493758 PHF24Q9UPV7 400 aa8.54□□□□□ -1.04
ITGB1-216ENST00000493758 SLURP2P0DP57 97 aa8.53□□□□□ -1.04
ITGB1-216ENST00000493758 FKBP5Q13451 457 aaPredicted RBP8.53□□□□□ -1.04
ITGB1-216ENST00000493758 IER5Q5VY09 327 aa8.53□□□□□ -1.04
ITGB1-216ENST00000493758 ALDH16A1Q8IZ83 802 aa8.53□□□□□ -1.04
ITGB1-216ENST00000493758 MBIPQ9NS73 344 aa8.53□□□□□ -1.04
ITGB1-216ENST00000493758 SLAIN2Q9P270 581 aa8.53□□□□□ -1.04
ITGB1-216ENST00000493758 PCDHGC4Q9Y5F7 938 aa8.53□□□□□ -1.04
ITGB1-216ENST00000493758 EFSO43281 561 aa8.52□□□□□ -1.05
ITGB1-216ENST00000493758 SRSF11Q05519 484 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms