RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 NPC1L1Q9UHC9 1359 aa13.87□□□□□ -0.19
NUDCD3-210ENST00000493613 ZPR1O75312 459 aa13.87□□□□□ -0.19
NUDCD3-210ENST00000493613 CYP19A1P11511 503 aaPredicted RBP13.87□□□□□ -0.19
NUDCD3-210ENST00000493613 KCNA3P22001 575 aa13.87□□□□□ -0.19
NUDCD3-210ENST00000493613 SOS1Q07889 1333 aaPredicted RBP13.87□□□□□ -0.19
NUDCD3-210ENST00000493613 TIAM2Q8IVF5 1701 aa13.87□□□□□ -0.19
NUDCD3-210ENST00000493613 USPL1Q5W0Q7 1092 aa13.86□□□□□ -0.19
NUDCD3-210ENST00000493613 PIM2Q9P1W9 311 aa13.86□□□□□ -0.19
NUDCD3-210ENST00000493613 BCORQ6W2J9 1755 aa13.86□□□□□ -0.19
NUDCD3-210ENST00000493613 POLRMTO00411 1230 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-210ENST00000493613 KIF3CO14782 793 aa13.85□□□□□ -0.19
NUDCD3-210ENST00000493613 U2SURPO15042 1029 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-210ENST00000493613 TM4SF1P30408 202 aa13.85□□□□□ -0.19
NUDCD3-210ENST00000493613 DLG5Q8TDM6 1919 aa13.84□□□□□ -0.19
NUDCD3-210ENST00000493613 HSPA6P17066 643 aa13.84□□□□□ -0.19
NUDCD3-210ENST00000493613 DALRD3Q5D0E6 543 aaKnown RBP13.84□□□□□ -0.19
NUDCD3-210ENST00000493613 VSIG10Q8N0Z9 540 aa13.84□□□□□ -0.19
NUDCD3-210ENST00000493613 NARFQ9UHQ1 456 aa13.84□□□□□ -0.19
NUDCD3-210ENST00000493613 ZBTB1Q9Y2K1 713 aa13.84□□□□□ -0.19
NUDCD3-210ENST00000493613 WDR90Q96KV7 1748 aa13.84□□□□□ -0.19
NUDCD3-210ENST00000493613 CHRNA5P30532 468 aa13.83□□□□□ -0.2
NUDCD3-210ENST00000493613 TTC5Q8N0Z6 440 aa13.83□□□□□ -0.2
NUDCD3-210ENST00000493613 COL11A2P13942 1736 aaPredicted RBP13.83□□□□□ -0.2
NUDCD3-210ENST00000493613 DICER1Q9UPY3 1922 aaKnown RBP13.82□□□□□ -0.2
NUDCD3-210ENST00000493613 GNAT3A8MTJ3 354 aa13.82□□□□□ -0.2
NUDCD3-210ENST00000493613 TEFQ10587 303 aa13.82□□□□□ -0.2
NUDCD3-210ENST00000493613 ARFGEF2Q9Y6D5 1785 aa13.81□□□□□ -0.2
NUDCD3-210ENST00000493613 CANXP27824 592 aaKnown RBP13.81□□□□□ -0.2
NUDCD3-210ENST00000493613 NFIXQ14938 502 aa13.81□□□□□ -0.2
NUDCD3-210ENST00000493613 C9orf131Q5VYM1 1079 aa13.81□□□□□ -0.2
NUDCD3-210ENST00000493613 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
NUDCD3-210ENST00000493613 FER1L6Q2WGJ9 1857 aa13.8□□□□□ -0.2
NUDCD3-210ENST00000493613 TOMM70O94826 608 aa13.8□□□□□ -0.2
NUDCD3-210ENST00000493613 STARD3NLO95772 234 aa13.8□□□□□ -0.2
NUDCD3-210ENST00000493613 ZNF790Q6PG37 636 aa13.8□□□□□ -0.2
NUDCD3-210ENST00000493613 IL17REQ8NFR9 667 aa13.8□□□□□ -0.2
NUDCD3-210ENST00000493613 BCL2L12Q9HB09 334 aa13.8□□□□□ -0.2
NUDCD3-210ENST00000493613 NMRK2Q9NPI5 230 aa13.8□□□□□ -0.2
NUDCD3-210ENST00000493613 LAMB4A4D0S4 1761 aa13.8□□□□□ -0.2
NUDCD3-210ENST00000493613 HEG1Q9ULI3 1381 aa13.8□□□□□ -0.2
NUDCD3-210ENST00000493613 SERPINB2P05120 415 aa13.79□□□□□ -0.2
NUDCD3-210ENST00000493613 ZNF496Q96IT1 587 aaPredicted RBP13.79□□□□□ -0.2
NUDCD3-210ENST00000493613 CFAP53Q96M91 514 aa13.79□□□□□ -0.2
NUDCD3-210ENST00000493613 EIF5P55010 431 aaKnown RBP13.78□□□□□ -0.2
NUDCD3-210ENST00000493613 RNF181Q9P0P0 153 aa13.78□□□□□ -0.2
NUDCD3-210ENST00000493613 CEMIPQ8WUJ3 1361 aa13.78□□□□□ -0.2
NUDCD3-210ENST00000493613 A0A087WZG4 1122 aa13.77□□□□□ -0.21
NUDCD3-210ENST00000493613 PRKAR2BP31323 418 aa13.77□□□□□ -0.21
NUDCD3-210ENST00000493613 BICDL1Q6ZP65 573 aa13.77□□□□□ -0.21
NUDCD3-210ENST00000493613 CARMIL3Q8ND23 1372 aa13.77□□□□□ -0.21
NUDCD3-210ENST00000493613 KDM2BQ8NHM5 1336 aa13.77□□□□□ -0.21
NUDCD3-210ENST00000493613 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
NUDCD3-210ENST00000493613 TEX13AQ9BXU3 409 aaPredicted RBP13.77□□□□□ -0.21
NUDCD3-210ENST00000493613 ZNF330Q9Y3S2 320 aaPredicted RBP13.77□□□□□ -0.21
NUDCD3-210ENST00000493613 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
NUDCD3-210ENST00000493613 RSPH6AQ9H0K4 717 aa13.76□□□□□ -0.21
NUDCD3-210ENST00000493613 KDM3BQ7LBC6 1761 aa13.76□□□□□ -0.21
NUDCD3-210ENST00000493613 H0YIN7 160 aa13.75□□□□□ -0.21
NUDCD3-210ENST00000493613 APLP1P51693 650 aa13.75□□□□□ -0.21
NUDCD3-210ENST00000493613 RASSF7Q02833 373 aa13.75□□□□□ -0.21
NUDCD3-210ENST00000493613 C2CD5Q86YS7 1000 aa13.75□□□□□ -0.21
NUDCD3-210ENST00000493613 C16orf71Q8IYS4 520 aaPredicted RBP13.75□□□□□ -0.21
NUDCD3-210ENST00000493613 TBC1D2BQ9UPU7 963 aa13.75□□□□□ -0.21
NUDCD3-210ENST00000493613 NUDCQ9Y266 331 aa13.75□□□□□ -0.21
NUDCD3-210ENST00000493613 SLX4Q8IY92 1834 aa13.75□□□□□ -0.21
NUDCD3-210ENST00000493613 BTBD11A6QL63 1104 aa13.74□□□□□ -0.21
NUDCD3-210ENST00000493613 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
NUDCD3-210ENST00000493613 TBC1D9BQ66K14 1250 aa13.74□□□□□ -0.21
NUDCD3-210ENST00000493613 NPM2Q86SE8 214 aaKnown RBP13.74□□□□□ -0.21
NUDCD3-210ENST00000493613 TTLL6Q8N841 843 aa13.74□□□□□ -0.21
NUDCD3-210ENST00000493613 NUP98P52948 1817 aa13.74□□□□□ -0.21
NUDCD3-210ENST00000493613 A1BGP04217 495 aa13.73□□□□□ -0.21
NUDCD3-210ENST00000493613 U2AF1L5P0DN76 240 aaPredicted RBP13.73□□□□□ -0.21
NUDCD3-210ENST00000493613 PPP2R1AP30153 589 aa13.73□□□□□ -0.21
NUDCD3-210ENST00000493613 U2AF1Q01081 240 aaKnown RBP eCLIP13.73□□□□□ -0.21
NUDCD3-210ENST00000493613 RBM46Q8TBY0 533 aaKnown RBP13.73□□□□□ -0.21
NUDCD3-210ENST00000493613 ZC3H4Q9UPT8 1303 aaKnown RBP13.72□□□□□ -0.21
NUDCD3-210ENST00000493613 KCNQ3O43525 872 aa13.72□□□□□ -0.21
NUDCD3-210ENST00000493613 LMNB1P20700 586 aa13.72□□□□□ -0.21
NUDCD3-210ENST00000493613 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
NUDCD3-210ENST00000493613 RRAGCQ9HB90 399 aa13.72□□□□□ -0.21
NUDCD3-210ENST00000493613 PDE6BP35913 854 aa13.71□□□□□ -0.21
NUDCD3-210ENST00000493613 PRR5LQ6MZQ0 368 aa13.71□□□□□ -0.21
NUDCD3-210ENST00000493613 MCM10Q7L590 875 aa13.71□□□□□ -0.21
NUDCD3-210ENST00000493613 BRIP1Q9BX63 1249 aa13.71□□□□□ -0.21
NUDCD3-210ENST00000493613 PCNTO95613 3336 aa13.71□□□□□ -0.21
NUDCD3-210ENST00000493613 NPHP1O15259 732 aa13.7□□□□□ -0.22
NUDCD3-210ENST00000493613 PRELPP51888 382 aa13.7□□□□□ -0.22
NUDCD3-210ENST00000493613 DZIP3Q86Y13 1208 aaKnown RBP13.7□□□□□ -0.22
NUDCD3-210ENST00000493613 CCDC24Q8N4L8 307 aa13.7□□□□□ -0.22
NUDCD3-210ENST00000493613 ZNF622Q969S3 477 aaKnown RBP eCLIP13.7□□□□□ -0.22
NUDCD3-210ENST00000493613 SETDB2Q96T68 719 aa13.7□□□□□ -0.22
NUDCD3-210ENST00000493613 PDZRN3Q9UPQ7 1066 aa13.7□□□□□ -0.22
NUDCD3-210ENST00000493613 USP16Q9Y5T5 823 aa13.7□□□□□ -0.22
NUDCD3-210ENST00000493613 CAMTA2O94983 1202 aa13.69□□□□□ -0.22
NUDCD3-210ENST00000493613 PIP4K2AP48426 406 aaPredicted RBP13.69□□□□□ -0.22
NUDCD3-210ENST00000493613 FSTL1Q12841 308 aa13.69□□□□□ -0.22
NUDCD3-210ENST00000493613 IFFO2Q5TF58 517 aa13.69□□□□□ -0.22
NUDCD3-210ENST00000493613 CNBD1Q8NA66 436 aa13.69□□□□□ -0.22
NUDCD3-210ENST00000493613 PRAMEF22A3QJZ6 481 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms