RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 PAXBP1Q9Y5B6 917 aa15.71■□□□□ 0.11
PTK7-218ENST00000493339 HSPA4P34932 840 aa15.71■□□□□ 0.11
PTK7-218ENST00000493339 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
PTK7-218ENST00000493339 RUFY3Q7L099 469 aa15.71■□□□□ 0.11
PTK7-218ENST00000493339 MRVI1Q9Y6F6 885 aa15.71■□□□□ 0.11
PTK7-218ENST00000493339 LARGE1O95461 756 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 GJB2P29033 226 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 IL13P35225 146 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 ANO6Q4KMQ2 910 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 CEP135Q66GS9 1140 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 FERMT3Q86UX7 667 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 IPO4Q8TEX9 1081 aaKnown RBP15.7■□□□□ 0.1
PTK7-218ENST00000493339 IL1RAPL2Q9NP60 686 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 ZNF215Q9UL58 517 aaPredicted RBP15.7■□□□□ 0.1
PTK7-218ENST00000493339 FAM173BQ6P4H8 233 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 MCM10Q7L590 875 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 NUP62CLQ9H1M0 184 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 CBX8Q9HC52 389 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 LIMCH1Q9UPQ0 1083 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 FANCAO15360 1455 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 ZFYVE9O95405 1425 aa15.7■□□□□ 0.1
PTK7-218ENST00000493339 LIG1P18858 919 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 RASEFQ8IZ41 740 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 CACTINQ8WUQ7 758 aaKnown RBP15.69■□□□□ 0.1
PTK7-218ENST00000493339 MROH1Q8NDA8 1641 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 CD163L1Q9NR16 1453 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 G2E3Q7L622 706 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 CDK19Q9BWU1 502 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 MIS18AQ9NYP9 233 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 SNX14Q9Y5W7 946 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 RPGRIP1LQ68CZ1 1315 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 CAMSAP1Q5T5Y3 1602 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 PNMA6EA0A0J9YXQ4 647 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 RRS1Q15050 365 aaKnown RBP15.69■□□□□ 0.1
PTK7-218ENST00000493339 MTMR6Q9Y217 621 aa15.69■□□□□ 0.1
PTK7-218ENST00000493339 SALL3Q9BXA9 1300 aa15.68■□□□□ 0.1
PTK7-218ENST00000493339 GNAI2P04899 355 aa15.68■□□□□ 0.1
PTK7-218ENST00000493339 ZNF397Q8NF99 534 aaPredicted RBP15.68■□□□□ 0.1
PTK7-218ENST00000493339 DDX54Q8TDD1 881 aaKnown RBP15.68■□□□□ 0.1
PTK7-218ENST00000493339 CLIP2Q9UDT6 1046 aa15.68■□□□□ 0.1
PTK7-218ENST00000493339 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
PTK7-218ENST00000493339 USP27XA6NNY8 438 aa15.68■□□□□ 0.1
PTK7-218ENST00000493339 ZNF75DP51815 510 aa15.68■□□□□ 0.1
PTK7-218ENST00000493339 ELF2Q15723 593 aa15.68■□□□□ 0.1
PTK7-218ENST00000493339 NUTM1Q86Y26 1132 aa15.68■□□□□ 0.1
PTK7-218ENST00000493339 TNMDQ9H2S6 317 aa15.68■□□□□ 0.1
PTK7-218ENST00000493339 NPATQ14207 1427 aa15.68■□□□□ 0.1
PTK7-218ENST00000493339 PTPRCP08575 1304 aa15.68■□□□□ 0.1
PTK7-218ENST00000493339 CCDC144BQ3MJ40 725 aa15.67■□□□□ 0.1
PTK7-218ENST00000493339 FBXO38Q6PIJ6 1188 aa15.67■□□□□ 0.1
PTK7-218ENST00000493339 CCDC144CPQ8IYA2 1237 aa15.67■□□□□ 0.1
PTK7-218ENST00000493339 CASTP20810 708 aaKnown RBP15.67■□□□□ 0.1
PTK7-218ENST00000493339 ARID5BQ14865 1188 aa15.67■□□□□ 0.1
PTK7-218ENST00000493339 TTC6Q86TZ1 520 aa15.67■□□□□ 0.1
PTK7-218ENST00000493339 DACT1Q9NYF0 836 aa15.67■□□□□ 0.1
PTK7-218ENST00000493339 ARHGEF28Q8N1W1 1705 aaKnown RBP15.67■□□□□ 0.1
PTK7-218ENST00000493339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.66■□□□□ 0.1
PTK7-218ENST00000493339 ERCC6L2Q5T890 1561 aa15.66■□□□□ 0.1
PTK7-218ENST00000493339 TTC14Q96N46 770 aa15.66■□□□□ 0.1
PTK7-218ENST00000493339 TRMT1Q9NXH9 659 aaKnown RBP15.66■□□□□ 0.1
PTK7-218ENST00000493339 SPG7Q9UQ90 795 aa15.66■□□□□ 0.1
PTK7-218ENST00000493339 SSH2Q76I76 1423 aa15.66■□□□□ 0.1
PTK7-218ENST00000493339 PPLO60437 1756 aa15.66■□□□□ 0.1
PTK7-218ENST00000493339 ZCCHC11Q5TAX3 1644 aaKnown RBP15.66■□□□□ 0.1
PTK7-218ENST00000493339 GOLGA6L4A6NEF3 574 aa15.66■□□□□ 0.1
PTK7-218ENST00000493339 RBM6P78332 1123 aaKnown RBP15.66■□□□□ 0.1
PTK7-218ENST00000493339 AEBP1Q8IUX7 1158 aa15.66■□□□□ 0.1
PTK7-218ENST00000493339 ABCC3O15438 1527 aa15.65■□□□□ 0.1
PTK7-218ENST00000493339 KIAA0232Q92628 1395 aa15.65■□□□□ 0.1
PTK7-218ENST00000493339 NME9Q86XW9 330 aa15.65■□□□□ 0.1
PTK7-218ENST00000493339 NECAB1Q8N987 351 aa15.65■□□□□ 0.1
PTK7-218ENST00000493339 DNAJC25Q9H1X3 360 aa15.65■□□□□ 0.1
PTK7-218ENST00000493339 RAD50Q92878 1312 aa15.65■□□□□ 0.1
PTK7-218ENST00000493339 YTHDC2Q9H6S0 1430 aaKnown RBP15.64■□□□□ 0.09
PTK7-218ENST00000493339 ZNF165P49910 485 aa15.64■□□□□ 0.09
PTK7-218ENST00000493339 PTPN14Q15678 1187 aa15.64■□□□□ 0.09
PTK7-218ENST00000493339 CWC27Q6UX04 472 aaKnown RBP15.64■□□□□ 0.09
PTK7-218ENST00000493339 PLA2G4DQ86XP0 818 aa15.64■□□□□ 0.09
PTK7-218ENST00000493339 CHMP4AQ9BY43 222 aa15.64■□□□□ 0.09
PTK7-218ENST00000493339 CALCOCO1Q9P1Z2 691 aa15.64■□□□□ 0.09
PTK7-218ENST00000493339 CDC42BPGQ6DT37 1551 aa15.64■□□□□ 0.09
PTK7-218ENST00000493339 CAPN2P17655 700 aa15.63■□□□□ 0.09
PTK7-218ENST00000493339 KRT85P78386 507 aa15.63■□□□□ 0.09
PTK7-218ENST00000493339 TFIP11Q9UBB9 837 aaKnown RBP15.63■□□□□ 0.09
PTK7-218ENST00000493339 GTF3C6Q969F1 213 aa15.63■□□□□ 0.09
PTK7-218ENST00000493339 CHL1O00533 1208 aa15.63■□□□□ 0.09
PTK7-218ENST00000493339 CCT4P50991 539 aaKnown RBP15.63■□□□□ 0.09
PTK7-218ENST00000493339 LARP1BQ659C4 914 aaKnown RBP15.62■□□□□ 0.09
PTK7-218ENST00000493339 NECTIN2Q92692 538 aa15.62■□□□□ 0.09
PTK7-218ENST00000493339 DNAJC2Q99543 621 aaKnown RBP15.62■□□□□ 0.09
PTK7-218ENST00000493339 SGSM2O43147 1006 aa15.62■□□□□ 0.09
PTK7-218ENST00000493339 SULT6B1Q6IMI4 303 aa15.62■□□□□ 0.09
PTK7-218ENST00000493339 FILIP1Q7Z7B0 1213 aa15.62■□□□□ 0.09
PTK7-218ENST00000493339 IL17RAQ96F46 866 aa15.62■□□□□ 0.09
PTK7-218ENST00000493339 JAKMIP1Q96N16 626 aaKnown RBP15.62■□□□□ 0.09
PTK7-218ENST00000493339 TRIM34Q9BYJ4 488 aa15.62■□□□□ 0.09
PTK7-218ENST00000493339 HYPKQ9NX55 129 aa15.62■□□□□ 0.09
PTK7-218ENST00000493339 PDIA4P13667 645 aaKnown RBP15.61■□□□□ 0.09
PTK7-218ENST00000493339 CDC37L1Q7L3B6 337 aa15.61■□□□□ 0.09
PTK7-218ENST00000493339 NOL10Q9BSC4 688 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms