RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 USPL1Q5W0Q7 1092 aa23.1■■□□□ 1.29
SGMS1-204ENST00000492601 COL15A1P39059 1388 aa23.1■■□□□ 1.29
SGMS1-204ENST00000492601 ARFGEF1Q9Y6D6 1849 aa23.09■■□□□ 1.29
SGMS1-204ENST00000492601 GIGYF1O75420 1035 aaPredicted RBP23.08■■□□□ 1.29
SGMS1-204ENST00000492601 CANXP27824 592 aaKnown RBP23.08■■□□□ 1.29
SGMS1-204ENST00000492601 ZNF790Q6PG37 636 aa23.08■■□□□ 1.29
SGMS1-204ENST00000492601 ZNF496Q96IT1 587 aaPredicted RBP23.08■■□□□ 1.29
SGMS1-204ENST00000492601 BCS1LQ9Y276 419 aa23.08■■□□□ 1.29
SGMS1-204ENST00000492601 DLG5Q8TDM6 1919 aa23.08■■□□□ 1.28
SGMS1-204ENST00000492601 C1QTNF8P60827 252 aa23.07■■□□□ 1.28
SGMS1-204ENST00000492601 CEMIPQ8WUJ3 1361 aa23.06■■□□□ 1.28
SGMS1-204ENST00000492601 HEG1Q9ULI3 1381 aa23.06■■□□□ 1.28
SGMS1-204ENST00000492601 NARFQ9UHQ1 456 aa23.06■■□□□ 1.28
SGMS1-204ENST00000492601 POLRMTO00411 1230 aaKnown RBP23.05■■□□□ 1.28
SGMS1-204ENST00000492601 STARD3NLO95772 234 aa23.05■■□□□ 1.28
SGMS1-204ENST00000492601 TM4SF1P30408 202 aa23.05■■□□□ 1.28
SGMS1-204ENST00000492601 ADCY9O60503 1353 aa23.04■■□□□ 1.28
SGMS1-204ENST00000492601 FCHSD2O94868 740 aa23.04■■□□□ 1.28
SGMS1-204ENST00000492601 ZNF526Q8TF50 670 aaPredicted RBP23.04■■□□□ 1.28
SGMS1-204ENST00000492601 NRXN2Q9P2S2 1712 aa23.03■■□□□ 1.28
SGMS1-204ENST00000492601 BTBD11A6QL63 1104 aa23.03■■□□□ 1.28
SGMS1-204ENST00000492601 KCNQ3O43525 872 aa23.03■■□□□ 1.28
SGMS1-204ENST00000492601 KCNA3P22001 575 aa23.02■■□□□ 1.28
SGMS1-204ENST00000492601 NFIXQ14938 502 aa23.02■■□□□ 1.28
SGMS1-204ENST00000492601 MCM10Q7L590 875 aa23.02■■□□□ 1.28
SGMS1-204ENST00000492601 RTF1Q92541 710 aaKnown RBP23.02■■□□□ 1.28
SGMS1-204ENST00000492601 FMNL2Q96PY5 1086 aa23.02■■□□□ 1.28
SGMS1-204ENST00000492601 BCL2L12Q9HB09 334 aa23.02■■□□□ 1.28
SGMS1-204ENST00000492601 ARHGAP27Q6ZUM4 889 aa23.01■■□□□ 1.27
SGMS1-204ENST00000492601 GPBP1L1Q9HC44 474 aaPredicted RBP23.01■■□□□ 1.27
SGMS1-204ENST00000492601 ZNF330Q9Y3S2 320 aaPredicted RBP23.01■■□□□ 1.27
SGMS1-204ENST00000492601 SCN7AQ01118 1682 aa23■■□□□ 1.27
SGMS1-204ENST00000492601 CHRNA5P30532 468 aa23■■□□□ 1.27
SGMS1-204ENST00000492601 EIF5P55010 431 aaKnown RBP23■■□□□ 1.27
SGMS1-204ENST00000492601 TEX13AQ9BXU3 409 aaPredicted RBP23■■□□□ 1.27
SGMS1-204ENST00000492601 PIM2Q9P1W9 311 aa23■■□□□ 1.27
SGMS1-204ENST00000492601 SENP3-EIF4A1A0A087X0R7 540 aa22.99■■□□□ 1.27
SGMS1-204ENST00000492601 DCTN1Q14203 1278 aa22.99■■□□□ 1.27
SGMS1-204ENST00000492601 A0A087WZG4 1122 aa22.98■■□□□ 1.27
SGMS1-204ENST00000492601 A1BGP04217 495 aa22.98■■□□□ 1.27
SGMS1-204ENST00000492601 DLEC1Q9Y238 1755 aa22.98■■□□□ 1.27
SGMS1-204ENST00000492601 SBF1O95248 1867 aa22.97■■□□□ 1.27
SGMS1-204ENST00000492601 BICDL1Q6ZP65 573 aa22.97■■□□□ 1.27
SGMS1-204ENST00000492601 SERPINB2P05120 415 aa22.96■■□□□ 1.27
SGMS1-204ENST00000492601 DALRD3Q5D0E6 543 aaKnown RBP22.96■■□□□ 1.27
SGMS1-204ENST00000492601 TBC1D2BQ9UPU7 963 aa22.96■■□□□ 1.27
SGMS1-204ENST00000492601 BCORQ6W2J9 1755 aa22.96■■□□□ 1.27
SGMS1-204ENST00000492601 ANKRD31Q8N7Z5 1873 aa22.96■■□□□ 1.27
SGMS1-204ENST00000492601 PRAMEF22A3QJZ6 481 aa22.94■■□□□ 1.26
SGMS1-204ENST00000492601 IL6STP40189 918 aaPredicted RBP22.94■■□□□ 1.26
SGMS1-204ENST00000492601 USP16Q9Y5T5 823 aa22.94■■□□□ 1.26
SGMS1-204ENST00000492601 CCDC88AQ3V6T2 1871 aa22.94■■□□□ 1.26
SGMS1-204ENST00000492601 HTATSF1O43719 755 aaKnown RBP22.93■■□□□ 1.26
SGMS1-204ENST00000492601 PIP4K2AP48426 406 aaPredicted RBP22.93■■□□□ 1.26
SGMS1-204ENST00000492601 TBC1D9BQ66K14 1250 aa22.93■■□□□ 1.26
SGMS1-204ENST00000492601 NPM2Q86SE8 214 aaKnown RBP22.93■■□□□ 1.26
SGMS1-204ENST00000492601 CARMIL3Q8ND23 1372 aa22.92■■□□□ 1.26
SGMS1-204ENST00000492601 NEFMP07197 916 aa22.92■■□□□ 1.26
SGMS1-204ENST00000492601 MIS18AQ9NYP9 233 aa22.91■■□□□ 1.26
SGMS1-204ENST00000492601 KDM3BQ7LBC6 1761 aa22.91■■□□□ 1.26
SGMS1-204ENST00000492601 CACNA1SQ13698 1873 aa22.9■■□□□ 1.26
SGMS1-204ENST00000492601 SNRPA1P09661 255 aaKnown RBP22.9■■□□□ 1.26
SGMS1-204ENST00000492601 LAMB4A4D0S4 1761 aa22.9■■□□□ 1.26
SGMS1-204ENST00000492601 TAF7Q15545 349 aaPredicted RBP22.89■■□□□ 1.25
SGMS1-204ENST00000492601 C9orf131Q5VYM1 1079 aa22.89■■□□□ 1.25
SGMS1-204ENST00000492601 COL11A2P13942 1736 aaPredicted RBP22.88■■□□□ 1.25
SGMS1-204ENST00000492601 CAMTA2O94983 1202 aa22.88■■□□□ 1.25
SGMS1-204ENST00000492601 C2CD5Q86YS7 1000 aa22.88■■□□□ 1.25
SGMS1-204ENST00000492601 CCDC24Q8N4L8 307 aa22.88■■□□□ 1.25
SGMS1-204ENST00000492601 PLEKHF1Q96S99 279 aa22.88■■□□□ 1.25
SGMS1-204ENST00000492601 CEP350Q5VT06 3117 aa22.88■■□□□ 1.25
SGMS1-204ENST00000492601 DDX10Q13206 875 aaKnown RBP22.87■■□□□ 1.25
SGMS1-204ENST00000492601 DZIP3Q86Y13 1208 aaKnown RBP22.87■■□□□ 1.25
SGMS1-204ENST00000492601 NFE2L2Q16236 605 aa22.86■■□□□ 1.25
SGMS1-204ENST00000492601 MAPK8IP3Q9UPT6 1336 aa22.85■■□□□ 1.25
SGMS1-204ENST00000492601 H0YIN7 160 aa22.85■■□□□ 1.25
SGMS1-204ENST00000492601 PRR5LQ6MZQ0 368 aa22.85■■□□□ 1.25
SGMS1-204ENST00000492601 SETDB2Q96T68 719 aa22.85■■□□□ 1.25
SGMS1-204ENST00000492601 THUMPD2Q9BTF0 503 aaKnown RBP22.85■■□□□ 1.25
SGMS1-204ENST00000492601 KIF3CO14782 793 aa22.84■■□□□ 1.25
SGMS1-204ENST00000492601 RALBP1Q15311 655 aa22.84■■□□□ 1.25
SGMS1-204ENST00000492601 TTLL6Q8N841 843 aa22.84■■□□□ 1.25
SGMS1-204ENST00000492601 RNF181Q9P0P0 153 aa22.84■■□□□ 1.25
SGMS1-204ENST00000492601 NBPF26B4DH59 902 aa22.83■■□□□ 1.25
SGMS1-204ENST00000492601 NBPF10Q6P3W6 841 aaKnown RBP22.83■■□□□ 1.25
SGMS1-204ENST00000492601 NBPF15Q8N660 670 aa22.83■■□□□ 1.25
SGMS1-204ENST00000492601 PNNQ9H307 717 aaKnown RBP22.83■■□□□ 1.25
SGMS1-204ENST00000492601 NPHP1O15259 732 aa22.82■■□□□ 1.24
SGMS1-204ENST00000492601 RASSF7Q02833 373 aa22.82■■□□□ 1.24
SGMS1-204ENST00000492601 NUP98P52948 1817 aa22.81■■□□□ 1.24
SGMS1-204ENST00000492601 CNBD1Q8NA66 436 aa22.81■■□□□ 1.24
SGMS1-204ENST00000492601 ZNF622Q969S3 477 aaKnown RBP eCLIP22.81■■□□□ 1.24
SGMS1-204ENST00000492601 BRIP1Q9BX63 1249 aa22.81■■□□□ 1.24
SGMS1-204ENST00000492601 PDE6BP35913 854 aa22.8■■□□□ 1.24
SGMS1-204ENST00000492601 PNISRQ8TF01 805 aaKnown RBP22.8■■□□□ 1.24
SGMS1-204ENST00000492601 NMRK2Q9NPI5 230 aa22.8■■□□□ 1.24
SGMS1-204ENST00000492601 SLX4Q8IY92 1834 aa22.8■■□□□ 1.24
SGMS1-204ENST00000492601 TIAM2Q8IVF5 1701 aa22.79■■□□□ 1.24
SGMS1-204ENST00000492601 FER1L6Q2WGJ9 1857 aa22.79■■□□□ 1.24
SGMS1-204ENST00000492601 ST5P78524 1137 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms