RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SOS1Q07889 1333 aaPredicted RBP17.96■□□□□ 0.46
HDAC3-213ENST00000492506 ZC3H4Q9UPT8 1303 aaKnown RBP17.96■□□□□ 0.46
HDAC3-213ENST00000492506 RASSF7Q02833 373 aa17.95■□□□□ 0.46
HDAC3-213ENST00000492506 DNAJC10Q8IXB1 793 aa17.95■□□□□ 0.46
HDAC3-213ENST00000492506 SMC1BQ8NDV3 1235 aa17.95■□□□□ 0.46
HDAC3-213ENST00000492506 MRC1P22897 1456 aa17.95■□□□□ 0.46
HDAC3-213ENST00000492506 DICER1Q9UPY3 1922 aaKnown RBP17.94■□□□□ 0.46
HDAC3-213ENST00000492506 SULT6B1Q6IMI4 303 aa17.94■□□□□ 0.46
HDAC3-213ENST00000492506 POLR3GLQ9BT43 218 aa17.94■□□□□ 0.46
HDAC3-213ENST00000492506 PANK3Q9H999 370 aa17.94■□□□□ 0.46
HDAC3-213ENST00000492506 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
HDAC3-213ENST00000492506 ANKRD31Q8N7Z5 1873 aa17.93■□□□□ 0.46
HDAC3-213ENST00000492506 CYP19A1P11511 503 aaPredicted RBP17.93■□□□□ 0.46
HDAC3-213ENST00000492506 NFIXQ14938 502 aa17.93■□□□□ 0.46
HDAC3-213ENST00000492506 BCL2L12Q9HB09 334 aa17.93■□□□□ 0.46
HDAC3-213ENST00000492506 ZPR1O75312 459 aa17.92■□□□□ 0.46
HDAC3-213ENST00000492506 IL13P35225 146 aa17.92■□□□□ 0.46
HDAC3-213ENST00000492506 NARFQ9UHQ1 456 aa17.92■□□□□ 0.46
HDAC3-213ENST00000492506 TIMELESSQ9UNS1 1208 aa17.92■□□□□ 0.46
HDAC3-213ENST00000492506 GLTPD2A6NH11 291 aa17.91■□□□□ 0.46
HDAC3-213ENST00000492506 LMNB1P20700 586 aa17.91■□□□□ 0.46
HDAC3-213ENST00000492506 SLC52A2Q9HAB3 445 aa17.91■□□□□ 0.46
HDAC3-213ENST00000492506 LGR6Q9HBX8 967 aa17.91■□□□□ 0.46
HDAC3-213ENST00000492506 FER1L6Q2WGJ9 1857 aa17.9■□□□□ 0.46
HDAC3-213ENST00000492506 VEGFAP15692 232 aaPredicted RBP17.9■□□□□ 0.46
HDAC3-213ENST00000492506 AKAP4Q5JQC9 854 aa17.9■□□□□ 0.46
HDAC3-213ENST00000492506 COL15A1P39059 1388 aa17.9■□□□□ 0.46
HDAC3-213ENST00000492506 POTECB2RU33 542 aa17.89■□□□□ 0.45
HDAC3-213ENST00000492506 DIEXFQ68CQ4 756 aaKnown RBP17.89■□□□□ 0.45
HDAC3-213ENST00000492506 ZBTB1Q9Y2K1 713 aa17.89■□□□□ 0.45
HDAC3-213ENST00000492506 CARMIL3Q8ND23 1372 aa17.89■□□□□ 0.45
HDAC3-213ENST00000492506 COL11A2P13942 1736 aaPredicted RBP17.89■□□□□ 0.45
HDAC3-213ENST00000492506 NFKBIEO00221 500 aa17.88■□□□□ 0.45
HDAC3-213ENST00000492506 CAPN15O75808 1086 aa17.88■□□□□ 0.45
HDAC3-213ENST00000492506 SERPINB2P05120 415 aa17.88■□□□□ 0.45
HDAC3-213ENST00000492506 SLC39A6Q13433 755 aa17.88■□□□□ 0.45
HDAC3-213ENST00000492506 MORC1Q86VD1 984 aa17.88■□□□□ 0.45
HDAC3-213ENST00000492506 TNS4Q8IZW8 715 aa17.88■□□□□ 0.45
HDAC3-213ENST00000492506 TTLL6Q8N841 843 aa17.88■□□□□ 0.45
HDAC3-213ENST00000492506 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
HDAC3-213ENST00000492506 C2CD5Q86YS7 1000 aa17.86■□□□□ 0.45
HDAC3-213ENST00000492506 HSPA1AP0DMV8 641 aaKnown RBP17.85■□□□□ 0.45
HDAC3-213ENST00000492506 HSPA1BP0DMV9 641 aaKnown RBP17.85■□□□□ 0.45
HDAC3-213ENST00000492506 SCN7AQ01118 1682 aa17.85■□□□□ 0.45
HDAC3-213ENST00000492506 CACNA1SQ13698 1873 aa17.85■□□□□ 0.45
HDAC3-213ENST00000492506 VSIG10Q8N0Z9 540 aa17.84■□□□□ 0.45
HDAC3-213ENST00000492506 BCL11AQ9H165 835 aa17.84■□□□□ 0.45
HDAC3-213ENST00000492506 SIPA1L3O60292 1781 aaPredicted RBP17.84■□□□□ 0.45
HDAC3-213ENST00000492506 H0YIN7 160 aa17.83■□□□□ 0.44
HDAC3-213ENST00000492506 HSPA5P11021 654 aaKnown RBP17.83■□□□□ 0.44
HDAC3-213ENST00000492506 SLX4Q8IY92 1834 aa17.82■□□□□ 0.44
HDAC3-213ENST00000492506 ARFGEF2Q9Y6D5 1785 aa17.82■□□□□ 0.44
HDAC3-213ENST00000492506 EIF5P55010 431 aaKnown RBP17.82■□□□□ 0.44
HDAC3-213ENST00000492506 MTHFSDQ2M296 383 aaKnown RBP17.82■□□□□ 0.44
HDAC3-213ENST00000492506 CANXP27824 592 aaKnown RBP17.81■□□□□ 0.44
HDAC3-213ENST00000492506 EIF4G2P78344 907 aaKnown RBP eCLIP17.81■□□□□ 0.44
HDAC3-213ENST00000492506 HMOX1P09601 288 aa17.8■□□□□ 0.44
HDAC3-213ENST00000492506 AMER1Q5JTC6 1135 aaPredicted RBP17.8■□□□□ 0.44
HDAC3-213ENST00000492506 TBC1D9BQ66K14 1250 aa17.79■□□□□ 0.44
HDAC3-213ENST00000492506 BICDL1Q6ZP65 573 aa17.79■□□□□ 0.44
HDAC3-213ENST00000492506 C21orf2O43822 256 aa17.78■□□□□ 0.44
HDAC3-213ENST00000492506 DPY19L2Q6NUT2 758 aa17.78■□□□□ 0.44
HDAC3-213ENST00000492506 ANP32EQ9BTT0 268 aa17.78■□□□□ 0.44
HDAC3-213ENST00000492506 BRIP1Q9BX63 1249 aa17.78■□□□□ 0.44
HDAC3-213ENST00000492506 KNSTRNQ9Y448 316 aa17.78■□□□□ 0.44
HDAC3-213ENST00000492506 BCORQ6W2J9 1755 aa17.78■□□□□ 0.44
HDAC3-213ENST00000492506 LTBP3Q9NS15 1303 aa17.77■□□□□ 0.44
HDAC3-213ENST00000492506 ERFEQ4G0M1 354 aa17.77■□□□□ 0.44
HDAC3-213ENST00000492506 PRR5LQ6MZQ0 368 aa17.77■□□□□ 0.44
HDAC3-213ENST00000492506 ZNF622Q969S3 477 aaKnown RBP eCLIP17.77■□□□□ 0.44
HDAC3-213ENST00000492506 A0A087WZG4 1122 aa17.76■□□□□ 0.43
HDAC3-213ENST00000492506 STARD3NLO95772 234 aa17.76■□□□□ 0.43
HDAC3-213ENST00000492506 PDE6BP35913 854 aa17.76■□□□□ 0.43
HDAC3-213ENST00000492506 CCDC24Q8N4L8 307 aa17.76■□□□□ 0.43
HDAC3-213ENST00000492506 ZNF219Q9P2Y4 722 aaPredicted RBP17.76■□□□□ 0.43
HDAC3-213ENST00000492506 PDZRN3Q9UPQ7 1066 aa17.76■□□□□ 0.43
HDAC3-213ENST00000492506 SCN4AP35499 1836 aa17.76■□□□□ 0.43
HDAC3-213ENST00000492506 POTEIP0CG38 1075 aa17.75■□□□□ 0.43
HDAC3-213ENST00000492506 POTEJP0CG39 1038 aa17.75■□□□□ 0.43
HDAC3-213ENST00000492506 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
HDAC3-213ENST00000492506 ZNF496Q96IT1 587 aaPredicted RBP17.75■□□□□ 0.43
HDAC3-213ENST00000492506 CREBZFQ9NS37 354 aa17.75■□□□□ 0.43
HDAC3-213ENST00000492506 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
HDAC3-213ENST00000492506 TBC1D2BQ9UPU7 963 aa17.74■□□□□ 0.43
HDAC3-213ENST00000492506 HEG1Q9ULI3 1381 aa17.74■□□□□ 0.43
HDAC3-213ENST00000492506 DDNO94850 711 aaPredicted RBP17.73■□□□□ 0.43
HDAC3-213ENST00000492506 IL17REQ8NFR9 667 aa17.73■□□□□ 0.43
HDAC3-213ENST00000492506 TAOK3Q9H2K8 898 aa17.73■□□□□ 0.43
HDAC3-213ENST00000492506 MKRN1Q9UHC7 482 aaKnown RBP17.73■□□□□ 0.43
HDAC3-213ENST00000492506 COL3A1P02461 1466 aaPredicted RBP17.72■□□□□ 0.43
HDAC3-213ENST00000492506 IL6STP40189 918 aaPredicted RBP17.72■□□□□ 0.43
HDAC3-213ENST00000492506 ZNF790Q6PG37 636 aa17.72■□□□□ 0.43
HDAC3-213ENST00000492506 TTC5Q8N0Z6 440 aa17.72■□□□□ 0.43
HDAC3-213ENST00000492506 PASKQ96RG2 1323 aa17.72■□□□□ 0.43
HDAC3-213ENST00000492506 DIAPH1O60610 1272 aaKnown RBP17.71■□□□□ 0.43
HDAC3-213ENST00000492506 CAMTA2O94983 1202 aa17.71■□□□□ 0.43
HDAC3-213ENST00000492506 SRGNP10124 158 aa17.71■□□□□ 0.43
HDAC3-213ENST00000492506 STYK1Q6J9G0 422 aa17.71■□□□□ 0.43
HDAC3-213ENST00000492506 TEX13AQ9BXU3 409 aaPredicted RBP17.71■□□□□ 0.43
HDAC3-213ENST00000492506 ADAMTSL1Q8N6G6 1762 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms