RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 IL17REQ8NFR9 667 aa19.6■□□□□ 0.73
SS18L1-205ENST00000492466 ZNF316A6NFI3 1004 aaPredicted RBP19.59■□□□□ 0.73
SS18L1-205ENST00000492466 ZBTB1Q9Y2K1 713 aa19.59■□□□□ 0.73
SS18L1-205ENST00000492466 KIF3CO14782 793 aa19.58■□□□□ 0.72
SS18L1-205ENST00000492466 BCL2L12Q9HB09 334 aa19.58■□□□□ 0.72
SS18L1-205ENST00000492466 NARFQ9UHQ1 456 aa19.58■□□□□ 0.72
SS18L1-205ENST00000492466 FCHSD2O94868 740 aa19.57■□□□□ 0.72
SS18L1-205ENST00000492466 RALBP1Q15311 655 aa19.57■□□□□ 0.72
SS18L1-205ENST00000492466 ARFGEF1Q9Y6D6 1849 aa19.56■□□□□ 0.72
SS18L1-205ENST00000492466 ZPR1O75312 459 aa19.56■□□□□ 0.72
SS18L1-205ENST00000492466 ARHGAP27Q6ZUM4 889 aa19.56■□□□□ 0.72
SS18L1-205ENST00000492466 COL15A1P39059 1388 aa19.56■□□□□ 0.72
SS18L1-205ENST00000492466 GNAT3A8MTJ3 354 aa19.55■□□□□ 0.72
SS18L1-205ENST00000492466 CHRNA5P30532 468 aa19.55■□□□□ 0.72
SS18L1-205ENST00000492466 NFIXQ14938 502 aa19.55■□□□□ 0.72
SS18L1-205ENST00000492466 PHACTR3Q96KR7 559 aa19.55■□□□□ 0.72
SS18L1-205ENST00000492466 PIM2Q9P1W9 311 aa19.55■□□□□ 0.72
SS18L1-205ENST00000492466 SIPA1L3O60292 1781 aaPredicted RBP19.55■□□□□ 0.72
SS18L1-205ENST00000492466 U2AF1L5P0DN76 240 aaPredicted RBP19.54■□□□□ 0.72
SS18L1-205ENST00000492466 EIF5P55010 431 aaKnown RBP19.54■□□□□ 0.72
SS18L1-205ENST00000492466 U2AF1Q01081 240 aaKnown RBP eCLIP19.54■□□□□ 0.723e-7■■■□□ 15.3
SS18L1-205ENST00000492466 GAS2L2Q8NHY3 880 aa19.54■□□□□ 0.72
SS18L1-205ENST00000492466 ZNF496Q96IT1 587 aaPredicted RBP19.54■□□□□ 0.72
SS18L1-205ENST00000492466 CEMIPQ8WUJ3 1361 aa19.54■□□□□ 0.72
SS18L1-205ENST00000492466 NRXN2Q9P2S2 1712 aa19.54■□□□□ 0.72
SS18L1-205ENST00000492466 AFDNP55196 1824 aaKnown RBP19.53■□□□□ 0.72
SS18L1-205ENST00000492466 ZNF790Q6PG37 636 aa19.53■□□□□ 0.72
SS18L1-205ENST00000492466 RSPH6AQ9H0K4 717 aa19.53■□□□□ 0.72
SS18L1-205ENST00000492466 MYBBP1AQ9BQG0 1328 aaKnown RBP19.52■□□□□ 0.72
SS18L1-205ENST00000492466 DALRD3Q5D0E6 543 aaKnown RBP19.52■□□□□ 0.72
SS18L1-205ENST00000492466 NEFMP07197 916 aa19.51■□□□□ 0.71
SS18L1-205ENST00000492466 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
SS18L1-205ENST00000492466 HEG1Q9ULI3 1381 aa19.51■□□□□ 0.71
SS18L1-205ENST00000492466 STARD3NLO95772 234 aa19.5■□□□□ 0.71
SS18L1-205ENST00000492466 HSPA6P17066 643 aa19.5■□□□□ 0.71
SS18L1-205ENST00000492466 PRKAR2BP31323 418 aa19.5■□□□□ 0.71
SS18L1-205ENST00000492466 TEFQ10587 303 aa19.5■□□□□ 0.71
SS18L1-205ENST00000492466 TTC5Q8N0Z6 440 aa19.5■□□□□ 0.71
SS18L1-205ENST00000492466 KCNQ3O43525 872 aa19.49■□□□□ 0.71
SS18L1-205ENST00000492466 SERPINB2P05120 415 aa19.49■□□□□ 0.71
SS18L1-205ENST00000492466 C9orf131Q5VYM1 1079 aa19.49■□□□□ 0.71
SS18L1-205ENST00000492466 NMRK2Q9NPI5 230 aa19.47■□□□□ 0.71
SS18L1-205ENST00000492466 CARMIL3Q8ND23 1372 aa19.46■□□□□ 0.71
SS18L1-205ENST00000492466 SBF1O95248 1867 aa19.46■□□□□ 0.71
SS18L1-205ENST00000492466 TEX13AQ9BXU3 409 aaPredicted RBP19.46■□□□□ 0.71
SS18L1-205ENST00000492466 A1BGP04217 495 aa19.45■□□□□ 0.7
SS18L1-205ENST00000492466 IL6STP40189 918 aaPredicted RBP19.45■□□□□ 0.7
SS18L1-205ENST00000492466 TBC1D9BQ66K14 1250 aa19.45■□□□□ 0.7
SS18L1-205ENST00000492466 FMNL2Q96PY5 1086 aa19.45■□□□□ 0.7
SS18L1-205ENST00000492466 PCNTO95613 3336 aa19.45■□□□□ 0.7
SS18L1-205ENST00000492466 DLEC1Q9Y238 1755 aa19.44■□□□□ 0.7
SS18L1-205ENST00000492466 A0A087WZG4 1122 aa19.44■□□□□ 0.7
SS18L1-205ENST00000492466 TOMM70O94826 608 aa19.44■□□□□ 0.7
SS18L1-205ENST00000492466 PRELPP51888 382 aa19.44■□□□□ 0.7
SS18L1-205ENST00000492466 PRKRIP1Q9H875 184 aaPredicted RBP19.44■□□□□ 0.7
SS18L1-205ENST00000492466 TBC1D2BQ9UPU7 963 aa19.44■□□□□ 0.7
SS18L1-205ENST00000492466 DLG5Q8TDM6 1919 aa19.43■□□□□ 0.7
SS18L1-205ENST00000492466 BTBD11A6QL63 1104 aa19.43■□□□□ 0.7
SS18L1-205ENST00000492466 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
SS18L1-205ENST00000492466 RNF181Q9P0P0 153 aa19.43■□□□□ 0.7
SS18L1-205ENST00000492466 MAPK8IP3Q9UPT6 1336 aa19.43■□□□□ 0.7
SS18L1-205ENST00000492466 SCN7AQ01118 1682 aa19.43■□□□□ 0.7
SS18L1-205ENST00000492466 PRAMEF22A3QJZ6 481 aa19.42■□□□□ 0.7
SS18L1-205ENST00000492466 WDR43Q15061 677 aaKnown RBP eCLIP19.42■□□□□ 0.7
SS18L1-205ENST00000492466 USP16Q9Y5T5 823 aa19.42■□□□□ 0.7
SS18L1-205ENST00000492466 ANKRD31Q8N7Z5 1873 aa19.41■□□□□ 0.7
SS18L1-205ENST00000492466 CAMTA2O94983 1202 aa19.41■□□□□ 0.7
SS18L1-205ENST00000492466 MCM10Q7L590 875 aa19.41■□□□□ 0.7
SS18L1-205ENST00000492466 C2CD5Q86YS7 1000 aa19.41■□□□□ 0.7
SS18L1-205ENST00000492466 PNNQ9H307 717 aaKnown RBP19.41■□□□□ 0.7
SS18L1-205ENST00000492466 ANP32CO43423 234 aa19.4■□□□□ 0.7
SS18L1-205ENST00000492466 RASSF7Q02833 373 aa19.4■□□□□ 0.7
SS18L1-205ENST00000492466 DCTN1Q14203 1278 aa19.4■□□□□ 0.7
SS18L1-205ENST00000492466 PRR5LQ6MZQ0 368 aa19.4■□□□□ 0.7
SS18L1-205ENST00000492466 TTLL6Q8N841 843 aa19.4■□□□□ 0.7
SS18L1-205ENST00000492466 RTF1Q92541 710 aaKnown RBP19.39■□□□□ 0.69
SS18L1-205ENST00000492466 H0YIN7 160 aa19.38■□□□□ 0.69
SS18L1-205ENST00000492466 PIP4K2AP48426 406 aaPredicted RBP19.38■□□□□ 0.69
SS18L1-205ENST00000492466 CCDC24Q8N4L8 307 aa19.38■□□□□ 0.69
SS18L1-205ENST00000492466 BRIP1Q9BX63 1249 aa19.38■□□□□ 0.69
SS18L1-205ENST00000492466 ZNF330Q9Y3S2 320 aaPredicted RBP19.38■□□□□ 0.69
SS18L1-205ENST00000492466 NFKBIEO00221 500 aa19.37■□□□□ 0.69
SS18L1-205ENST00000492466 HTATSF1O43719 755 aaKnown RBP19.37■□□□□ 0.69
SS18L1-205ENST00000492466 DNAJC5GQ8N7S2 189 aa19.37■□□□□ 0.69
SS18L1-205ENST00000492466 LMNB1P20700 586 aa19.36■□□□□ 0.69
SS18L1-205ENST00000492466 RBM46Q8TBY0 533 aaKnown RBP19.36■□□□□ 0.69
SS18L1-205ENST00000492466 BCORQ6W2J9 1755 aa19.36■□□□□ 0.69
SS18L1-205ENST00000492466 COL11A2P13942 1736 aaPredicted RBP19.36■□□□□ 0.69
SS18L1-205ENST00000492466 KDM2BQ8NHM5 1336 aa19.35■□□□□ 0.69
SS18L1-205ENST00000492466 ZC3H4Q9UPT8 1303 aaKnown RBP19.35■□□□□ 0.69
SS18L1-205ENST00000492466 NBPF26B4DH59 902 aa19.35■□□□□ 0.69
SS18L1-205ENST00000492466 SNRPA1P09661 255 aaKnown RBP19.35■□□□□ 0.69
SS18L1-205ENST00000492466 APLP1P51693 650 aa19.35■□□□□ 0.69
SS18L1-205ENST00000492466 NBPF10Q6P3W6 841 aaKnown RBP19.35■□□□□ 0.69
SS18L1-205ENST00000492466 DZIP3Q86Y13 1208 aaKnown RBP19.35■□□□□ 0.69
SS18L1-205ENST00000492466 NBPF15Q8N660 670 aa19.35■□□□□ 0.69
SS18L1-205ENST00000492466 RRAGCQ9HB90 399 aa19.35■□□□□ 0.69
SS18L1-205ENST00000492466 SETDB2Q96T68 719 aa19.34■□□□□ 0.69
SS18L1-205ENST00000492466 PDZRN3Q9UPQ7 1066 aa19.34■□□□□ 0.69
SS18L1-205ENST00000492466 PDE6BP35913 854 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms