RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 LNPKQ9C0E8 428 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 TNNQ9UQP3 1299 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 DLC1Q96QB1 1528 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 CDC42BPGQ6DT37 1551 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 SRGAP3O43295 1099 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 HTATSF1O43719 755 aaKnown RBP5.54□□□□□ -1.52
TRA2B-215ENST00000492417 CWF19L2Q2TBE0 894 aaKnown RBP5.54□□□□□ -1.52
TRA2B-215ENST00000492417 ATF5Q9Y2D1 282 aaPredicted RBP5.54□□□□□ -1.52
TRA2B-215ENST00000492417 IFIT2P09913 472 aaKnown RBP5.53□□□□□ -1.52
TRA2B-215ENST00000492417 MARCH10Q8NA82 808 aaPredicted RBP5.53□□□□□ -1.52
TRA2B-215ENST00000492417 PODXL2Q9NZ53 605 aa5.53□□□□□ -1.52
TRA2B-215ENST00000492417 ERVV-2B6SEH9 535 aa5.53□□□□□ -1.52
TRA2B-215ENST00000492417 GNAI2P04899 355 aa5.53□□□□□ -1.52
TRA2B-215ENST00000492417 LAMC1P11047 1609 aa5.53□□□□□ -1.52
TRA2B-215ENST00000492417 SPATA31A1Q5TZJ5 1347 aa5.53□□□□□ -1.52
TRA2B-215ENST00000492417 MED14O60244 1454 aa5.53□□□□□ -1.52
TRA2B-215ENST00000492417 NEURL4Q96JN8 1562 aa5.53□□□□□ -1.52
TRA2B-215ENST00000492417 VAMP4O75379 141 aa5.53□□□□□ -1.52
TRA2B-215ENST00000492417 CDK11BP21127 795 aaKnown RBP5.53□□□□□ -1.52
TRA2B-215ENST00000492417 IL1RAPL2Q9NP60 686 aa5.53□□□□□ -1.52
TRA2B-215ENST00000492417 THRAP3Q9Y2W1 955 aaKnown RBP5.53□□□□□ -1.52
TRA2B-215ENST00000492417 CCT4P50991 539 aaKnown RBP5.52□□□□□ -1.53
TRA2B-215ENST00000492417 FGD1P98174 961 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 CASC1Q6TDU7 716 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 RPGRQ92834 1020 aaKnown RBP5.52□□□□□ -1.53
TRA2B-215ENST00000492417 CCDC87Q9NVE4 849 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 ZBTB1Q9Y2K1 713 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 NCOA3Q9Y6Q9 1424 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 TRIM27P14373 513 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 POLD1P28340 1107 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 EIF4A1P60842 406 aaKnown RBP5.52□□□□□ -1.53
TRA2B-215ENST00000492417 BECN1Q14457 450 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 CNKSR2Q8WXI2 1034 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 FAM89AQ96GI7 184 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 EXOC6BQ9Y2D4 811 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 DCCP43146 1447 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 CHL1O00533 1208 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 USP31Q70CQ4 1352 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 NUTM1Q86Y26 1132 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 TOMM22Q9NS69 142 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 LRRFIP2Q9Y608 721 aaKnown RBP5.52□□□□□ -1.53
TRA2B-215ENST00000492417 PARP3Q9Y6F1 533 aa5.52□□□□□ -1.53
TRA2B-215ENST00000492417 CRB1P82279 1406 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 SPATA31A5Q5VU36 1347 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 SPATA31A7Q8IWB4 1347 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 HCLS1P14317 486 aaPredicted RBP5.51□□□□□ -1.53
TRA2B-215ENST00000492417 CCDC27Q2M243 656 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 HSP90AB3PQ58FF7 597 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 TTLL7Q6ZT98 887 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 GPATCH3Q96I76 525 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 PLEKHF1Q96S99 279 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 CWC25Q9NXE8 425 aaPredicted RBP5.51□□□□□ -1.53
TRA2B-215ENST00000492417 ANKIB1Q9P2G1 1089 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 RTL1A6NKG5 1358 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 C6orf229H3BNL8 230 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 IGHMBP2P38935 993 aaKnown RBP5.51□□□□□ -1.53
TRA2B-215ENST00000492417 CRKLP46109 303 aaKnown RBP5.51□□□□□ -1.53
TRA2B-215ENST00000492417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.51□□□□□ -1.531e-7■□□□□ 10.8
TRA2B-215ENST00000492417 USP19O94966 1318 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.51□□□□□ -1.53
TRA2B-215ENST00000492417 GIGYF1O75420 1035 aaPredicted RBP5.51□□□□□ -1.53
TRA2B-215ENST00000492417 ZBTB7AO95365 584 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 HSP90B1P14625 803 aaKnown RBP5.51□□□□□ -1.53
TRA2B-215ENST00000492417 POTEAQ6S8J7 498 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 PPP1R42Q7Z4L9 355 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 DDX21Q9NR30 783 aaKnown RBP eCLIP5.51□□□□□ -1.53
TRA2B-215ENST00000492417 SSH2Q76I76 1423 aa5.51□□□□□ -1.53
TRA2B-215ENST00000492417 TULP1O00294 542 aaPredicted RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 CHAF1AQ13111 956 aaPredicted RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 PROSER3Q2NL68 480 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 USPL1Q5W0Q7 1092 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 DNAJC2Q99543 621 aaKnown RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 SRP68Q9UHB9 627 aaKnown RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 CT47B1P0C2W7 299 aaPredicted RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 IFIT5Q13325 482 aaKnown RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 MVPQ14764 893 aaKnown RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 TXNRD1Q16881 649 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 METTL24Q5JXM2 366 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 KSR2Q6VAB6 950 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 TPTE2Q6XPS3 522 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 CLASRPQ8N2M8 674 aaKnown RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 NLRP3Q96P20 1036 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 MEIS3Q99687 375 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 CEP126Q9P2H0 1117 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 BLMP54132 1417 aaPredicted RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 PALLDQ8WX93 1383 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 IL16Q14005 1332 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 HMGB2P26583 209 aaKnown RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 ST5P78524 1137 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 FAM161AQ3B820 660 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 KIAA1211Q6ZU35 1233 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 DDX46Q7L014 1031 aaKnown RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 HELBQ8NG08 1087 aaPredicted RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 ATG3Q9NT62 314 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 MAP4K4O95819 1239 aaPredicted RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 APPP05067 770 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 R3HDM1Q15032 1099 aaKnown RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 ALDH1L2Q3SY69 923 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 TPRNQ4KMQ1 711 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 DNTTIP2Q5QJE6 756 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms