RNA–Protein interactions for RNA: ENST00000492271.1

TCEA3-206, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-206ENST00000492271 POLRMTO00411 1230 aaKnown RBP23.21■■□□□ 1.31
TCEA3-206ENST00000492271 GAS2L2Q8NHY3 880 aa23.21■■□□□ 1.31
TCEA3-206ENST00000492271 BCS1LQ9Y276 419 aa23.21■■□□□ 1.31
TCEA3-206ENST00000492271 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
TCEA3-206ENST00000492271 USPL1Q5W0Q7 1092 aa23.2■■□□□ 1.3
TCEA3-206ENST00000492271 RSPH6AQ9H0K4 717 aa23.2■■□□□ 1.3
TCEA3-206ENST00000492271 GPBP1L1Q9HC44 474 aaPredicted RBP23.2■■□□□ 1.3
TCEA3-206ENST00000492271 PHACTR3Q96KR7 559 aa23.19■■□□□ 1.3
TCEA3-206ENST00000492271 BCL2L12Q9HB09 334 aa23.19■■□□□ 1.3
TCEA3-206ENST00000492271 NARFQ9UHQ1 456 aa23.19■■□□□ 1.3
TCEA3-206ENST00000492271 SBF1O95248 1867 aa23.17■■□□□ 1.3
TCEA3-206ENST00000492271 HEG1Q9ULI3 1381 aa23.17■■□□□ 1.3
TCEA3-206ENST00000492271 ZPR1O75312 459 aa23.17■■□□□ 1.3
TCEA3-206ENST00000492271 ZNF526Q8TF50 670 aaPredicted RBP23.17■■□□□ 1.3
TCEA3-206ENST00000492271 ZNF496Q96IT1 587 aaPredicted RBP23.17■■□□□ 1.3
TCEA3-206ENST00000492271 FCHSD2O94868 740 aa23.16■■□□□ 1.3
TCEA3-206ENST00000492271 PPP2R1AP30153 589 aa23.16■■□□□ 1.3
TCEA3-206ENST00000492271 PRKAR2BP31323 418 aa23.16■■□□□ 1.3
TCEA3-206ENST00000492271 NFIXQ14938 502 aa23.16■■□□□ 1.3
TCEA3-206ENST00000492271 ZNF790Q6PG37 636 aa23.16■■□□□ 1.3
TCEA3-206ENST00000492271 ANKRD31Q8N7Z5 1873 aa23.15■■□□□ 1.3
TCEA3-206ENST00000492271 BCORQ6W2J9 1755 aa23.15■■□□□ 1.3
TCEA3-206ENST00000492271 TEFQ10587 303 aa23.15■■□□□ 1.3
TCEA3-206ENST00000492271 TTC5Q8N0Z6 440 aa23.15■■□□□ 1.3
TCEA3-206ENST00000492271 CHRNA5P30532 468 aa23.14■■□□□ 1.29
TCEA3-206ENST00000492271 EIF5P55010 431 aaKnown RBP23.14■■□□□ 1.29
TCEA3-206ENST00000492271 CFAP53Q96M91 514 aa23.14■■□□□ 1.29
TCEA3-206ENST00000492271 PIM2Q9P1W9 311 aa23.13■■□□□ 1.29
TCEA3-206ENST00000492271 DLG5Q8TDM6 1919 aa23.12■■□□□ 1.29
TCEA3-206ENST00000492271 KIF3CO14782 793 aa23.12■■□□□ 1.29
TCEA3-206ENST00000492271 STARD3NLO95772 234 aa23.12■■□□□ 1.29
TCEA3-206ENST00000492271 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
TCEA3-206ENST00000492271 ARHGAP27Q6ZUM4 889 aa23.12■■□□□ 1.29
TCEA3-206ENST00000492271 CARMIL3Q8ND23 1372 aa23.11■■□□□ 1.29
TCEA3-206ENST00000492271 COL11A2P13942 1736 aaPredicted RBP23.11■■□□□ 1.29
TCEA3-206ENST00000492271 DALRD3Q5D0E6 543 aaKnown RBP23.1■■□□□ 1.29
TCEA3-206ENST00000492271 KCNQ3O43525 872 aa23.09■■□□□ 1.29
TCEA3-206ENST00000492271 FMNL2Q96PY5 1086 aa23.08■■□□□ 1.29
TCEA3-206ENST00000492271 TEX13AQ9BXU3 409 aaPredicted RBP23.08■■□□□ 1.29
TCEA3-206ENST00000492271 NUDCQ9Y266 331 aa23.08■■□□□ 1.29
TCEA3-206ENST00000492271 SERPINB2P05120 415 aa23.07■■□□□ 1.28
TCEA3-206ENST00000492271 U2AF1L5P0DN76 240 aaPredicted RBP23.07■■□□□ 1.28
TCEA3-206ENST00000492271 U2AF1Q01081 240 aaKnown RBP eCLIP23.07■■□□□ 1.28
TCEA3-206ENST00000492271 LAMB4A4D0S4 1761 aa23.06■■□□□ 1.28
TCEA3-206ENST00000492271 CCDC88AQ3V6T2 1871 aa23.05■■□□□ 1.28
TCEA3-206ENST00000492271 A0A087WZG4 1122 aa23.05■■□□□ 1.28
TCEA3-206ENST00000492271 BTBD11A6QL63 1104 aa23.05■■□□□ 1.28
TCEA3-206ENST00000492271 IL6STP40189 918 aaPredicted RBP23.05■■□□□ 1.28
TCEA3-206ENST00000492271 C9orf131Q5VYM1 1079 aa23.05■■□□□ 1.28
TCEA3-206ENST00000492271 KDM3BQ7LBC6 1761 aa23.04■■□□□ 1.28
TCEA3-206ENST00000492271 TBC1D9BQ66K14 1250 aa23.04■■□□□ 1.28
TCEA3-206ENST00000492271 TNRC6CQ9HCJ0 1690 aaKnown RBP23.03■■□□□ 1.28
TCEA3-206ENST00000492271 A1BGP04217 495 aa23.03■■□□□ 1.28
TCEA3-206ENST00000492271 MCM10Q7L590 875 aa23.03■■□□□ 1.28
TCEA3-206ENST00000492271 TIAM2Q8IVF5 1701 aa23.02■■□□□ 1.28
TCEA3-206ENST00000492271 HSPA6P17066 643 aa23.02■■□□□ 1.28
TCEA3-206ENST00000492271 TBC1D2BQ9UPU7 963 aa23.02■■□□□ 1.28
TCEA3-206ENST00000492271 PRAMEF22A3QJZ6 481 aa23.01■■□□□ 1.27
TCEA3-206ENST00000492271 CAMTA2O94983 1202 aa23.01■■□□□ 1.27
TCEA3-206ENST00000492271 BICDL1Q6ZP65 573 aa23.01■■□□□ 1.27
TCEA3-206ENST00000492271 NMRK2Q9NPI5 230 aa23.01■■□□□ 1.27
TCEA3-206ENST00000492271 ARFGEF2Q9Y6D5 1785 aa23.01■■□□□ 1.27
TCEA3-206ENST00000492271 CACNA1SQ13698 1873 aa23■■□□□ 1.27
TCEA3-206ENST00000492271 DCTN1Q14203 1278 aa23■■□□□ 1.27
TCEA3-206ENST00000492271 USP16Q9Y5T5 823 aa23■■□□□ 1.27
TCEA3-206ENST00000492271 FER1L6Q2WGJ9 1857 aa23■■□□□ 1.27
TCEA3-206ENST00000492271 HTATSF1O43719 755 aaKnown RBP22.99■■□□□ 1.27
TCEA3-206ENST00000492271 RNF181Q9P0P0 153 aa22.99■■□□□ 1.27
TCEA3-206ENST00000492271 ZNF330Q9Y3S2 320 aaPredicted RBP22.99■■□□□ 1.27
TCEA3-206ENST00000492271 PRELPP51888 382 aa22.98■■□□□ 1.27
TCEA3-206ENST00000492271 PRR5LQ6MZQ0 368 aa22.98■■□□□ 1.27
TCEA3-206ENST00000492271 C2CD5Q86YS7 1000 aa22.98■■□□□ 1.27
TCEA3-206ENST00000492271 RTF1Q92541 710 aaKnown RBP22.98■■□□□ 1.27
TCEA3-206ENST00000492271 DICER1Q9UPY3 1922 aaKnown RBP22.98■■□□□ 1.27
TCEA3-206ENST00000492271 PIP4K2AP48426 406 aaPredicted RBP22.97■■□□□ 1.27
TCEA3-206ENST00000492271 RASSF7Q02833 373 aa22.97■■□□□ 1.27
TCEA3-206ENST00000492271 TTLL6Q8N841 843 aa22.97■■□□□ 1.27
TCEA3-206ENST00000492271 TOMM70O94826 608 aa22.96■■□□□ 1.27
TCEA3-206ENST00000492271 SNRPA1P09661 255 aaKnown RBP22.96■■□□□ 1.27
TCEA3-206ENST00000492271 DZIP3Q86Y13 1208 aaKnown RBP22.95■■□□□ 1.26
TCEA3-206ENST00000492271 SLX4Q8IY92 1834 aa22.95■■□□□ 1.26
TCEA3-206ENST00000492271 PLEKHF1Q96S99 279 aa22.95■■□□□ 1.26
TCEA3-206ENST00000492271 BRIP1Q9BX63 1249 aa22.95■■□□□ 1.26
TCEA3-206ENST00000492271 NBPF26B4DH59 902 aa22.94■■□□□ 1.26
TCEA3-206ENST00000492271 H0YIN7 160 aa22.94■■□□□ 1.26
TCEA3-206ENST00000492271 NBPF10Q6P3W6 841 aaKnown RBP22.94■■□□□ 1.26
TCEA3-206ENST00000492271 NBPF15Q8N660 670 aa22.94■■□□□ 1.26
TCEA3-206ENST00000492271 ZC3H4Q9UPT8 1303 aaKnown RBP22.93■■□□□ 1.26
TCEA3-206ENST00000492271 NFKBIEO00221 500 aa22.93■■□□□ 1.26
TCEA3-206ENST00000492271 CCDC24Q8N4L8 307 aa22.93■■□□□ 1.26
TCEA3-206ENST00000492271 WDR90Q96KV7 1748 aa22.93■■□□□ 1.26
TCEA3-206ENST00000492271 TAF7Q15545 349 aaPredicted RBP22.92■■□□□ 1.26
TCEA3-206ENST00000492271 KDM2BQ8NHM5 1336 aa22.91■■□□□ 1.26
TCEA3-206ENST00000492271 LMNB1P20700 586 aa22.91■■□□□ 1.26
TCEA3-206ENST00000492271 PDE6BP35913 854 aa22.91■■□□□ 1.26
TCEA3-206ENST00000492271 CNBD1Q8NA66 436 aa22.91■■□□□ 1.26
TCEA3-206ENST00000492271 SETDB2Q96T68 719 aa22.91■■□□□ 1.26
TCEA3-206ENST00000492271 PDZRN3Q9UPQ7 1066 aa22.91■■□□□ 1.26
TCEA3-206ENST00000492271 NUP98P52948 1817 aa22.9■■□□□ 1.26
TCEA3-206ENST00000492271 CLEC4GQ6UXB4 293 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms