RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 MAP3K19Q56UN5 1328 aa12.98□□□□□ -0.33
NCKAP1-206ENST00000492058 HOXC9P31274 260 aa12.98□□□□□ -0.33
NCKAP1-206ENST00000492058 ARHGAP27Q6ZUM4 889 aa12.98□□□□□ -0.33
NCKAP1-206ENST00000492058 AMIGO3Q86WK7 504 aa12.98□□□□□ -0.33
NCKAP1-206ENST00000492058 RAPGEF4Q8WZA2 1011 aa12.98□□□□□ -0.33
NCKAP1-206ENST00000492058 SIN3AQ96ST3 1273 aa12.98□□□□□ -0.33
NCKAP1-206ENST00000492058 LTN1O94822 1766 aa12.98□□□□□ -0.33
NCKAP1-206ENST00000492058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
NCKAP1-206ENST00000492058 NUDT7P0C024 238 aa12.97□□□□□ -0.33
NCKAP1-206ENST00000492058 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
NCKAP1-206ENST00000492058 TMC2Q8TDI7 906 aa12.97□□□□□ -0.33
NCKAP1-206ENST00000492058 COG3Q96JB2 828 aa12.97□□□□□ -0.33
NCKAP1-206ENST00000492058 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
NCKAP1-206ENST00000492058 NMRK2Q9NPI5 230 aa12.97□□□□□ -0.33
NCKAP1-206ENST00000492058 BCS1LQ9Y276 419 aa12.97□□□□□ -0.33
NCKAP1-206ENST00000492058 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.33
NCKAP1-206ENST00000492058 PALLDQ8WX93 1383 aa12.96□□□□□ -0.33
NCKAP1-206ENST00000492058 ECM2O94769 699 aaPredicted RBP12.96□□□□□ -0.33
NCKAP1-206ENST00000492058 TATP17735 454 aaPredicted RBP12.96□□□□□ -0.33
NCKAP1-206ENST00000492058 HMGB2P26583 209 aaKnown RBP12.96□□□□□ -0.33
NCKAP1-206ENST00000492058 C16orf71Q8IYS4 520 aaPredicted RBP12.96□□□□□ -0.33
NCKAP1-206ENST00000492058 MEGF6O75095 1541 aa12.95□□□□□ -0.34
NCKAP1-206ENST00000492058 A0A0G2JLW4 131 aa12.95□□□□□ -0.34
NCKAP1-206ENST00000492058 TNS4Q8IZW8 715 aa12.95□□□□□ -0.34
NCKAP1-206ENST00000492058 LY75O60449 1722 aa12.95□□□□□ -0.34
NCKAP1-206ENST00000492058 CD163L1Q9NR16 1453 aa12.95□□□□□ -0.34
NCKAP1-206ENST00000492058 SLC34A2O95436 690 aa12.94□□□□□ -0.34
NCKAP1-206ENST00000492058 RRS1Q15050 365 aaKnown RBP12.94□□□□□ -0.34
NCKAP1-206ENST00000492058 EDC4Q6P2E9 1401 aaKnown RBP12.94□□□□□ -0.34
NCKAP1-206ENST00000492058 MMP10P09238 476 aa12.93□□□□□ -0.34
NCKAP1-206ENST00000492058 SMARCC1Q92922 1105 aaPredicted RBP12.93□□□□□ -0.34
NCKAP1-206ENST00000492058 CARD11Q9BXL7 1154 aa12.93□□□□□ -0.34
NCKAP1-206ENST00000492058 PCDHGA4Q9Y5G9 962 aa12.93□□□□□ -0.34
NCKAP1-206ENST00000492058 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
NCKAP1-206ENST00000492058 A0A1W2PP64 1363 aa12.93□□□□□ -0.34
NCKAP1-206ENST00000492058 GNPATO15228 680 aa12.92□□□□□ -0.34
NCKAP1-206ENST00000492058 KLRG1Q96E93 195 aa12.92□□□□□ -0.34
NCKAP1-206ENST00000492058 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
NCKAP1-206ENST00000492058 CGNL1Q0VF96 1302 aa12.91□□□□□ -0.34
NCKAP1-206ENST00000492058 FCHSD2O94868 740 aa12.91□□□□□ -0.34
NCKAP1-206ENST00000492058 LINC00116Q8NCU8 138 aa12.91□□□□□ -0.34
NCKAP1-206ENST00000492058 PIGBQ92521 554 aa12.91□□□□□ -0.34
NCKAP1-206ENST00000492058 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
NCKAP1-206ENST00000492058 PCDH11YQ9BZA8 1340 aa12.9□□□□□ -0.34
NCKAP1-206ENST00000492058 CYP27B1O15528 508 aa12.9□□□□□ -0.34
NCKAP1-206ENST00000492058 SSFA2P28290 1259 aa12.9□□□□□ -0.34
NCKAP1-206ENST00000492058 C9orf131Q5VYM1 1079 aa12.9□□□□□ -0.34
NCKAP1-206ENST00000492058 RBM46Q8TBY0 533 aaKnown RBP12.9□□□□□ -0.34
NCKAP1-206ENST00000492058 C5P01031 1676 aa12.89□□□□□ -0.35
NCKAP1-206ENST00000492058 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
NCKAP1-206ENST00000492058 DPEP1P16444 411 aa12.89□□□□□ -0.35
NCKAP1-206ENST00000492058 ATP6V1AP38606 617 aa12.89□□□□□ -0.35
NCKAP1-206ENST00000492058 SIK1P57059 783 aa12.89□□□□□ -0.35
NCKAP1-206ENST00000492058 HSP90AB2PQ58FF8 381 aa12.89□□□□□ -0.35
NCKAP1-206ENST00000492058 PRELPP51888 382 aa12.88□□□□□ -0.35
NCKAP1-206ENST00000492058 TGFB2P61812 414 aa12.88□□□□□ -0.35
NCKAP1-206ENST00000492058 GGNBP2Q9H3C7 697 aa12.88□□□□□ -0.35
NCKAP1-206ENST00000492058 RRAGCQ9HB90 399 aa12.88□□□□□ -0.35
NCKAP1-206ENST00000492058 RGPD2P0DJD1 1756 aa12.88□□□□□ -0.35
NCKAP1-206ENST00000492058 TMF1P82094 1093 aa12.87□□□□□ -0.35
NCKAP1-206ENST00000492058 ITPK1Q13572 414 aa12.87□□□□□ -0.35
NCKAP1-206ENST00000492058 JMYQ8N9B5 988 aa12.87□□□□□ -0.35
NCKAP1-206ENST00000492058 ASAP1Q9ULH1 1129 aa12.87□□□□□ -0.35
NCKAP1-206ENST00000492058 C4BP0C0L5 1744 aa12.87□□□□□ -0.35
NCKAP1-206ENST00000492058 SMG6Q86US8 1419 aaKnown RBP12.87□□□□□ -0.35
NCKAP1-206ENST00000492058 NSD3Q9BZ95 1437 aa12.87□□□□□ -0.35
NCKAP1-206ENST00000492058 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
NCKAP1-206ENST00000492058 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
NCKAP1-206ENST00000492058 FSTL1Q12841 308 aa12.86□□□□□ -0.35
NCKAP1-206ENST00000492058 TRAPPC3LQ5T215 181 aa12.86□□□□□ -0.35
NCKAP1-206ENST00000492058 TMOD3Q9NYL9 352 aa12.86□□□□□ -0.35
NCKAP1-206ENST00000492058 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
NCKAP1-206ENST00000492058 PPM1GO15355 546 aaPredicted RBP12.85□□□□□ -0.35
NCKAP1-206ENST00000492058 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
NCKAP1-206ENST00000492058 CCDC87Q9NVE4 849 aa12.85□□□□□ -0.35
NCKAP1-206ENST00000492058 HCSTQ9UBK5 93 aa12.85□□□□□ -0.35
NCKAP1-206ENST00000492058 KDM2BQ8NHM5 1336 aa12.85□□□□□ -0.35
NCKAP1-206ENST00000492058 FYB1O15117 783 aa12.84□□□□□ -0.35
NCKAP1-206ENST00000492058 RNF181Q9P0P0 153 aa12.84□□□□□ -0.35
NCKAP1-206ENST00000492058 SPG7Q9UQ90 795 aa12.84□□□□□ -0.35
NCKAP1-206ENST00000492058 RTCBQ9Y3I0 505 aaKnown RBP12.84□□□□□ -0.35
NCKAP1-206ENST00000492058 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
NCKAP1-206ENST00000492058 ARHGAP33O14559 1287 aa12.83□□□□□ -0.36
NCKAP1-206ENST00000492058 TAF1LQ8IZX4 1826 aa12.83□□□□□ -0.36
NCKAP1-206ENST00000492058 RTL1A6NKG5 1358 aa12.82□□□□□ -0.36
NCKAP1-206ENST00000492058 RFC4P35249 363 aa12.82□□□□□ -0.36
NCKAP1-206ENST00000492058 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
NCKAP1-206ENST00000492058 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
NCKAP1-206ENST00000492058 PUS7Q96PZ0 661 aaKnown RBP12.82□□□□□ -0.36
NCKAP1-206ENST00000492058 PIM2Q9P1W9 311 aa12.82□□□□□ -0.36
NCKAP1-206ENST00000492058 SMC1BQ8NDV3 1235 aa12.81□□□□□ -0.36
NCKAP1-206ENST00000492058 ATG3Q9NT62 314 aa12.81□□□□□ -0.36
NCKAP1-206ENST00000492058 WDR90Q96KV7 1748 aa12.81□□□□□ -0.36
NCKAP1-206ENST00000492058 TOGARAM1Q9Y4F4 1720 aa12.81□□□□□ -0.36
NCKAP1-206ENST00000492058 KCPQ6ZWJ8 1503 aa12.81□□□□□ -0.36
NCKAP1-206ENST00000492058 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
NCKAP1-206ENST00000492058 INSRP06213 1382 aa12.81□□□□□ -0.36
NCKAP1-206ENST00000492058 PCNTO95613 3336 aa12.8□□□□□ -0.36
NCKAP1-206ENST00000492058 ST20-MTHFSA0A0A6YYL1 179 aa12.8□□□□□ -0.36
NCKAP1-206ENST00000492058 HSPA1AP0DMV8 641 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms