RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 PIM2Q9P1W9 311 aa23.28■■□□□ 1.32
PBX3-209ENST00000491787 ZBTB1Q9Y2K1 713 aa23.28■■□□□ 1.32
PBX3-209ENST00000491787 NRXN2Q9P2S2 1712 aa23.28■■□□□ 1.32
PBX3-209ENST00000491787 GNAT3A8MTJ3 354 aa23.27■■□□□ 1.32
PBX3-209ENST00000491787 KIF3CO14782 793 aa23.27■■□□□ 1.32
PBX3-209ENST00000491787 ARHGAP27Q6ZUM4 889 aa23.27■■□□□ 1.32
PBX3-209ENST00000491787 ZNF526Q8TF50 670 aaPredicted RBP23.27■■□□□ 1.32
PBX3-209ENST00000491787 COL15A1P39059 1388 aa23.27■■□□□ 1.31
PBX3-209ENST00000491787 U2SURPO15042 1029 aaKnown RBP23.26■■□□□ 1.31
PBX3-209ENST00000491787 BCL2L12Q9HB09 334 aa23.26■■□□□ 1.31
PBX3-209ENST00000491787 EIF5P55010 431 aaKnown RBP23.25■■□□□ 1.31
PBX3-209ENST00000491787 NFIXQ14938 502 aa23.25■■□□□ 1.31
PBX3-209ENST00000491787 DALRD3Q5D0E6 543 aaKnown RBP23.24■■□□□ 1.31
PBX3-209ENST00000491787 ZNF790Q6PG37 636 aa23.24■■□□□ 1.31
PBX3-209ENST00000491787 CEMIPQ8WUJ3 1361 aa23.24■■□□□ 1.31
PBX3-209ENST00000491787 SBF1O95248 1867 aa23.24■■□□□ 1.31
PBX3-209ENST00000491787 STARD3NLO95772 234 aa23.23■■□□□ 1.31
PBX3-209ENST00000491787 TTC5Q8N0Z6 440 aa23.23■■□□□ 1.31
PBX3-209ENST00000491787 ZNF496Q96IT1 587 aaPredicted RBP23.23■■□□□ 1.31
PBX3-209ENST00000491787 PHACTR3Q96KR7 559 aa23.23■■□□□ 1.31
PBX3-209ENST00000491787 TEX13AQ9BXU3 409 aaPredicted RBP23.23■■□□□ 1.31
PBX3-209ENST00000491787 RSPH6AQ9H0K4 717 aa23.23■■□□□ 1.31
PBX3-209ENST00000491787 CHRNA5P30532 468 aa23.22■■□□□ 1.31
PBX3-209ENST00000491787 TEFQ10587 303 aa23.22■■□□□ 1.31
PBX3-209ENST00000491787 HEG1Q9ULI3 1381 aa23.22■■□□□ 1.31
PBX3-209ENST00000491787 HSPA6P17066 643 aa23.21■■□□□ 1.31
PBX3-209ENST00000491787 CNGB1Q14028 1251 aaPredicted RBP23.21■■□□□ 1.31
PBX3-209ENST00000491787 CFAP53Q96M91 514 aa23.2■■□□□ 1.3
PBX3-209ENST00000491787 A0A087WZG4 1122 aa23.19■■□□□ 1.3
PBX3-209ENST00000491787 SERPINB2P05120 415 aa23.19■■□□□ 1.3
PBX3-209ENST00000491787 CANXP27824 592 aaKnown RBP23.19■■□□□ 1.3
PBX3-209ENST00000491787 DLEC1Q9Y238 1755 aa23.19■■□□□ 1.3
PBX3-209ENST00000491787 PPP2R1AP30153 589 aa23.18■■□□□ 1.3
PBX3-209ENST00000491787 PRKAR2BP31323 418 aa23.18■■□□□ 1.3
PBX3-209ENST00000491787 C9orf131Q5VYM1 1079 aa23.18■■□□□ 1.3
PBX3-209ENST00000491787 NUDCQ9Y266 331 aa23.17■■□□□ 1.3
PBX3-209ENST00000491787 IL6STP40189 918 aaPredicted RBP23.16■■□□□ 1.3
PBX3-209ENST00000491787 FMNL2Q96PY5 1086 aa23.16■■□□□ 1.3
PBX3-209ENST00000491787 KCNQ3O43525 872 aa23.14■■□□□ 1.29
PBX3-209ENST00000491787 TOMM70O94826 608 aa23.14■■□□□ 1.29
PBX3-209ENST00000491787 BTBD11A6QL63 1104 aa23.13■■□□□ 1.29
PBX3-209ENST00000491787 SCN7AQ01118 1682 aa23.13■■□□□ 1.29
PBX3-209ENST00000491787 TBC1D9BQ66K14 1250 aa23.12■■□□□ 1.29
PBX3-209ENST00000491787 ANKRD31Q8N7Z5 1873 aa23.12■■□□□ 1.29
PBX3-209ENST00000491787 NMRK2Q9NPI5 230 aa23.12■■□□□ 1.29
PBX3-209ENST00000491787 A1BGP04217 495 aa23.11■■□□□ 1.29
PBX3-209ENST00000491787 U2AF1L5P0DN76 240 aaPredicted RBP23.11■■□□□ 1.29
PBX3-209ENST00000491787 U2AF1Q01081 240 aaKnown RBP eCLIP23.11■■□□□ 1.29
PBX3-209ENST00000491787 HTATSF1O43719 755 aaKnown RBP23.1■■□□□ 1.29
PBX3-209ENST00000491787 TTLL6Q8N841 843 aa23.1■■□□□ 1.29
PBX3-209ENST00000491787 RNF181Q9P0P0 153 aa23.1■■□□□ 1.29
PBX3-209ENST00000491787 PDZRN3Q9UPQ7 1066 aa23.1■■□□□ 1.29
PBX3-209ENST00000491787 TBC1D2BQ9UPU7 963 aa23.1■■□□□ 1.29
PBX3-209ENST00000491787 CARMIL3Q8ND23 1372 aa23.1■■□□□ 1.29
PBX3-209ENST00000491787 CCDC88AQ3V6T2 1871 aa23.09■■□□□ 1.29
PBX3-209ENST00000491787 CAMTA2O94983 1202 aa23.09■■□□□ 1.29
PBX3-209ENST00000491787 C2CD5Q86YS7 1000 aa23.09■■□□□ 1.29
PBX3-209ENST00000491787 H0YIN7 160 aa23.08■■□□□ 1.29
PBX3-209ENST00000491787 BICDL1Q6ZP65 573 aa23.08■■□□□ 1.29
PBX3-209ENST00000491787 BRIP1Q9BX63 1249 aa23.08■■□□□ 1.29
PBX3-209ENST00000491787 USP16Q9Y5T5 823 aa23.08■■□□□ 1.29
PBX3-209ENST00000491787 ZC3H4Q9UPT8 1303 aaKnown RBP23.08■■□□□ 1.28
PBX3-209ENST00000491787 RBM46Q8TBY0 533 aaKnown RBP23.07■■□□□ 1.28
PBX3-209ENST00000491787 BCORQ6W2J9 1755 aa23.06■■□□□ 1.28
PBX3-209ENST00000491787 PRELPP51888 382 aa23.06■■□□□ 1.28
PBX3-209ENST00000491787 PRR5LQ6MZQ0 368 aa23.06■■□□□ 1.28
PBX3-209ENST00000491787 MCM10Q7L590 875 aa23.06■■□□□ 1.28
PBX3-209ENST00000491787 RTF1Q92541 710 aaKnown RBP23.06■■□□□ 1.28
PBX3-209ENST00000491787 KDM2BQ8NHM5 1336 aa23.06■■□□□ 1.28
PBX3-209ENST00000491787 SNRPA1P09661 255 aaKnown RBP23.05■■□□□ 1.28
PBX3-209ENST00000491787 APLP1P51693 650 aa23.05■■□□□ 1.28
PBX3-209ENST00000491787 LMNB1P20700 586 aa23.04■■□□□ 1.28
PBX3-209ENST00000491787 PDE6BP35913 854 aa23.04■■□□□ 1.28
PBX3-209ENST00000491787 RASSF7Q02833 373 aa23.04■■□□□ 1.28
PBX3-209ENST00000491787 TNRC6CQ9HCJ0 1690 aaKnown RBP23.03■■□□□ 1.28
PBX3-209ENST00000491787 PRAMEF22A3QJZ6 481 aa23.03■■□□□ 1.28
PBX3-209ENST00000491787 DCTN1Q14203 1278 aa23.03■■□□□ 1.28
PBX3-209ENST00000491787 CLEC4GQ6UXB4 293 aa23.03■■□□□ 1.28
PBX3-209ENST00000491787 SETDB2Q96T68 719 aa23.03■■□□□ 1.28
PBX3-209ENST00000491787 ZNF330Q9Y3S2 320 aaPredicted RBP23.03■■□□□ 1.28
PBX3-209ENST00000491787 DLG5Q8TDM6 1919 aa23.03■■□□□ 1.28
PBX3-209ENST00000491787 FER1L6Q2WGJ9 1857 aa23.02■■□□□ 1.28
PBX3-209ENST00000491787 NFKBIEO00221 500 aa23.02■■□□□ 1.28
PBX3-209ENST00000491787 RGL2O15211 777 aa23.02■■□□□ 1.28
PBX3-209ENST00000491787 TAF7Q15545 349 aaPredicted RBP23.02■■□□□ 1.28
PBX3-209ENST00000491787 DZIP3Q86Y13 1208 aaKnown RBP23.02■■□□□ 1.28
PBX3-209ENST00000491787 DNAJC5GQ8N7S2 189 aa23.02■■□□□ 1.28
PBX3-209ENST00000491787 COL11A2P13942 1736 aaPredicted RBP23.02■■□□□ 1.28
PBX3-209ENST00000491787 DICER1Q9UPY3 1922 aaKnown RBP23.02■■□□□ 1.28
PBX3-209ENST00000491787 NPM2Q86SE8 214 aaKnown RBP23.01■■□□□ 1.27
PBX3-209ENST00000491787 RRAGCQ9HB90 399 aa23.01■■□□□ 1.27
PBX3-209ENST00000491787 NBPF26B4DH59 902 aa23■■□□□ 1.27
PBX3-209ENST00000491787 FSTL1Q12841 308 aa23■■□□□ 1.27
PBX3-209ENST00000491787 NBPF10Q6P3W6 841 aaKnown RBP23■■□□□ 1.27
PBX3-209ENST00000491787 NBPF15Q8N660 670 aa23■■□□□ 1.27
PBX3-209ENST00000491787 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
PBX3-209ENST00000491787 CNBD1Q8NA66 436 aa22.99■■□□□ 1.27
PBX3-209ENST00000491787 ZNF622Q969S3 477 aaKnown RBP eCLIP22.99■■□□□ 1.27
PBX3-209ENST00000491787 SLX4Q8IY92 1834 aa22.98■■□□□ 1.27
PBX3-209ENST00000491787 GLTPD2A6NH11 291 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms