RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 GNAI1P63096 354 aa15.28■□□□□ 0.04
SRGAP3-210ENST00000491467 FLAD1Q8NFF5 587 aa15.28■□□□□ 0.04
SRGAP3-210ENST00000491467 SYTL4Q96C24 671 aaPredicted RBP15.28■□□□□ 0.04
SRGAP3-210ENST00000491467 ARFGEF1Q9Y6D6 1849 aa15.28■□□□□ 0.04
SRGAP3-210ENST00000491467 CNTNAP1P78357 1384 aa15.27■□□□□ 0.04
SRGAP3-210ENST00000491467 KIAA1551Q9HCM1 1747 aa15.27■□□□□ 0.04
SRGAP3-210ENST00000491467 RRS1Q15050 365 aaKnown RBP15.27■□□□□ 0.04
SRGAP3-210ENST00000491467 IFT57Q9NWB7 429 aa15.27■□□□□ 0.04
SRGAP3-210ENST00000491467 FLT4P35916 1363 aa15.26■□□□□ 0.03
SRGAP3-210ENST00000491467 C5P01031 1676 aa15.26■□□□□ 0.03
SRGAP3-210ENST00000491467 A0A0G2JLW4 131 aa15.26■□□□□ 0.03
SRGAP3-210ENST00000491467 IPO8O15397 1037 aaKnown RBP15.26■□□□□ 0.03
SRGAP3-210ENST00000491467 FBLN1P23142 703 aa15.26■□□□□ 0.03
SRGAP3-210ENST00000491467 EXOSC9Q06265 439 aaKnown RBP15.26■□□□□ 0.03
SRGAP3-210ENST00000491467 ZKSCAN2Q63HK3 967 aa15.26■□□□□ 0.03
SRGAP3-210ENST00000491467 KIF13BQ9NQT8 1826 aa15.26■□□□□ 0.03
SRGAP3-210ENST00000491467 HMOX1P09601 288 aa15.25■□□□□ 0.03
SRGAP3-210ENST00000491467 VEGFBP49765 207 aa15.25■□□□□ 0.03
SRGAP3-210ENST00000491467 EIF4A2Q14240 407 aaKnown RBP15.25■□□□□ 0.03
SRGAP3-210ENST00000491467 BRCA1P38398 1863 aaKnown RBP15.25■□□□□ 0.03
SRGAP3-210ENST00000491467 LTN1O94822 1766 aa15.24■□□□□ 0.03
SRGAP3-210ENST00000491467 KIF16BQ96L93 1317 aa15.24■□□□□ 0.03
SRGAP3-210ENST00000491467 CACNA1FO60840 1977 aa15.24■□□□□ 0.03
SRGAP3-210ENST00000491467 ZNF853P0CG23 659 aa15.24■□□□□ 0.03
SRGAP3-210ENST00000491467 CLUAP1Q96AJ1 413 aa15.24■□□□□ 0.03
SRGAP3-210ENST00000491467 PHACTR3Q96KR7 559 aa15.24■□□□□ 0.03
SRGAP3-210ENST00000491467 TAF1LQ8IZX4 1826 aa15.23■□□□□ 0.03
SRGAP3-210ENST00000491467 SMIM5Q71RC9 77 aa15.23■□□□□ 0.03
SRGAP3-210ENST00000491467 FRAT1Q92837 279 aaPredicted RBP15.23■□□□□ 0.03
SRGAP3-210ENST00000491467 CHMP4BQ9H444 224 aaKnown RBP15.23■□□□□ 0.03
SRGAP3-210ENST00000491467 NLRP6P59044 892 aa15.22■□□□□ 0.03
SRGAP3-210ENST00000491467 DZIP1LQ8IYY4 767 aaKnown RBP15.22■□□□□ 0.03
SRGAP3-210ENST00000491467 RTL1A6NKG5 1358 aa15.22■□□□□ 0.03
SRGAP3-210ENST00000491467 DOT1LQ8TEK3 1739 aa15.21■□□□□ 0.03
SRGAP3-210ENST00000491467 TGFB2P61812 414 aa15.21■□□□□ 0.03
SRGAP3-210ENST00000491467 ARHGAP45Q92619 1136 aa15.21■□□□□ 0.03
SRGAP3-210ENST00000491467 TSR2Q969E8 191 aaKnown RBP15.21■□□□□ 0.03
SRGAP3-210ENST00000491467 MAP3K19Q56UN5 1328 aa15.2■□□□□ 0.02
SRGAP3-210ENST00000491467 IL2RBP14784 551 aa15.2■□□□□ 0.02
SRGAP3-210ENST00000491467 AMPHP49418 695 aa15.2■□□□□ 0.02
SRGAP3-210ENST00000491467 PRIM1P49642 420 aaKnown RBP15.2■□□□□ 0.02
SRGAP3-210ENST00000491467 SULT6B1Q6IMI4 303 aa15.2■□□□□ 0.02
SRGAP3-210ENST00000491467 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
SRGAP3-210ENST00000491467 KDRP35968 1356 aa15.2■□□□□ 0.02
SRGAP3-210ENST00000491467 CCDC88AQ3V6T2 1871 aa15.2■□□□□ 0.02
SRGAP3-210ENST00000491467 DLL1O00548 723 aa15.19■□□□□ 0.02
SRGAP3-210ENST00000491467 HTATSF1O43719 755 aaKnown RBP15.19■□□□□ 0.02
SRGAP3-210ENST00000491467 MVPQ14764 893 aaKnown RBP15.19■□□□□ 0.02
SRGAP3-210ENST00000491467 ATF7IPQ6VMQ6 1270 aa15.19■□□□□ 0.02
SRGAP3-210ENST00000491467 DDX54Q8TDD1 881 aaKnown RBP15.19■□□□□ 0.02
SRGAP3-210ENST00000491467 PANK1Q8TE04 598 aa15.19■□□□□ 0.02
SRGAP3-210ENST00000491467 COG6Q9Y2V7 657 aa15.19■□□□□ 0.02
SRGAP3-210ENST00000491467 PHF14O94880 888 aa15.18■□□□□ 0.02
SRGAP3-210ENST00000491467 MAP2K1Q02750 393 aaPredicted RBP15.18■□□□□ 0.02
SRGAP3-210ENST00000491467 HSP90AB2PQ58FF8 381 aa15.18■□□□□ 0.02
SRGAP3-210ENST00000491467 FTSJ3Q8IY81 847 aaKnown RBP15.18■□□□□ 0.02
SRGAP3-210ENST00000491467 KCNH5Q8NCM2 988 aa15.18■□□□□ 0.02
SRGAP3-210ENST00000491467 SSH1Q8WYL5 1049 aa15.18■□□□□ 0.02
SRGAP3-210ENST00000491467 DDX19BQ9UMR2 479 aa15.18■□□□□ 0.02
SRGAP3-210ENST00000491467 SLIT3O75094 1523 aa15.17■□□□□ 0.02
SRGAP3-210ENST00000491467 GLTPD2A6NH11 291 aa15.17■□□□□ 0.02
SRGAP3-210ENST00000491467 MCOLN1Q9GZU1 580 aa15.17■□□□□ 0.02
SRGAP3-210ENST00000491467 RWDD1Q9H446 243 aaPredicted RBP15.17■□□□□ 0.02
SRGAP3-210ENST00000491467 ERBB3P21860 1342 aa15.17■□□□□ 0.02
SRGAP3-210ENST00000491467 UBR3Q6ZT12 1888 aa15.16■□□□□ 0.02
SRGAP3-210ENST00000491467 VAMP4O75379 141 aa15.16■□□□□ 0.02
SRGAP3-210ENST00000491467 DPEP1P16444 411 aa15.16■□□□□ 0.02
SRGAP3-210ENST00000491467 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
SRGAP3-210ENST00000491467 BACH2Q9BYV9 841 aa15.16■□□□□ 0.02
SRGAP3-210ENST00000491467 CASP8AP2Q9UKL3 1982 aa15.15■□□□□ 0.02
SRGAP3-210ENST00000491467 SOX12O15370 315 aa15.15■□□□□ 0.02
SRGAP3-210ENST00000491467 PDE4AP27815 886 aa15.15■□□□□ 0.02
SRGAP3-210ENST00000491467 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
SRGAP3-210ENST00000491467 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
SRGAP3-210ENST00000491467 NLRP2Q9NX02 1062 aa15.15■□□□□ 0.02
SRGAP3-210ENST00000491467 HOXC9P31274 260 aa15.14■□□□□ 0.01
SRGAP3-210ENST00000491467 AK7Q96M32 723 aa15.14■□□□□ 0.01
SRGAP3-210ENST00000491467 MBIPQ9NS73 344 aa15.14■□□□□ 0.01
SRGAP3-210ENST00000491467 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
SRGAP3-210ENST00000491467 LAS1LQ9Y4W2 734 aaKnown RBP15.14■□□□□ 0.01
SRGAP3-210ENST00000491467 NFAT5O94916 1531 aa15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 CHL1O00533 1208 aa15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 RLBP1P12271 317 aa15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 TRIM27P14373 513 aa15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 ANP32AP39687 249 aaKnown RBP15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 ARHGEF25Q86VW2 580 aa15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 IP6K1Q92551 441 aa15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 BEGAINQ9BUH8 593 aa15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 BCL2L13Q9BXK5 485 aa15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 BABAM1Q9NWV8 329 aa15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 TOGARAM1Q9Y4F4 1720 aa15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 SOS1Q07889 1333 aaPredicted RBP15.13■□□□□ 0.01
SRGAP3-210ENST00000491467 C4BP0C0L5 1744 aa15.12■□□□□ 0.01
SRGAP3-210ENST00000491467 HMGB2P26583 209 aaKnown RBP15.12■□□□□ 0.01
SRGAP3-210ENST00000491467 TWISTNBQ3B726 338 aaPredicted RBP15.12■□□□□ 0.01
SRGAP3-210ENST00000491467 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
SRGAP3-210ENST00000491467 EYA1Q99502 592 aa15.12■□□□□ 0.01
SRGAP3-210ENST00000491467 TIAM2Q8IVF5 1701 aa15.12■□□□□ 0.01
SRGAP3-210ENST00000491467 IGHDP01880 384 aa15.11■□□□□ 0.01
SRGAP3-210ENST00000491467 MMP10P09238 476 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms