RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 NFIXQ14938 502 aa11.11□□□□□ -0.63
APP-216ENST00000491395 ZNF790Q6PG37 636 aa11.11□□□□□ -0.63
APP-216ENST00000491395 BCL2L12Q9HB09 334 aa11.11□□□□□ -0.63
APP-216ENST00000491395 NUDCQ9Y266 331 aa11.11□□□□□ -0.63
APP-216ENST00000491395 ADCY9O60503 1353 aa11.11□□□□□ -0.63
APP-216ENST00000491395 KCPQ6ZWJ8 1503 aa11.1□□□□□ -0.63
APP-216ENST00000491395 COL5A3P25940 1745 aaPredicted RBP11.1□□□□□ -0.63
APP-216ENST00000491395 KCNQ3O43525 872 aa11.1□□□□□ -0.63
APP-216ENST00000491395 STARD3NLO95772 234 aa11.1□□□□□ -0.63
APP-216ENST00000491395 CHRNA5P30532 468 aa11.1□□□□□ -0.63
APP-216ENST00000491395 PIM2Q9P1W9 311 aa11.1□□□□□ -0.63
APP-216ENST00000491395 SCN11AQ9UI33 1791 aa11.09□□□□□ -0.63
APP-216ENST00000491395 COL15A1P39059 1388 aa11.09□□□□□ -0.63
APP-216ENST00000491395 EIF5P55010 431 aaKnown RBP11.09□□□□□ -0.63
APP-216ENST00000491395 DALRD3Q5D0E6 543 aaKnown RBP11.09□□□□□ -0.63
APP-216ENST00000491395 TJP1Q07157 1748 aa11.09□□□□□ -0.63
APP-216ENST00000491395 HEG1Q9ULI3 1381 aa11.08□□□□□ -0.64
APP-216ENST00000491395 BTBD11A6QL63 1104 aa11.08□□□□□ -0.64
APP-216ENST00000491395 SERPINB2P05120 415 aa11.08□□□□□ -0.64
APP-216ENST00000491395 BICDL1Q6ZP65 573 aa11.08□□□□□ -0.64
APP-216ENST00000491395 MCM10Q7L590 875 aa11.08□□□□□ -0.64
APP-216ENST00000491395 FMNL2Q96PY5 1086 aa11.08□□□□□ -0.64
APP-216ENST00000491395 TEX13AQ9BXU3 409 aaPredicted RBP11.08□□□□□ -0.64
APP-216ENST00000491395 ZNF330Q9Y3S2 320 aaPredicted RBP11.08□□□□□ -0.64
APP-216ENST00000491395 C4AP0C0L4 1744 aa11.08□□□□□ -0.64
APP-216ENST00000491395 CEMIPQ8WUJ3 1361 aa11.07□□□□□ -0.64
APP-216ENST00000491395 A0A087WZG4 1122 aa11.07□□□□□ -0.64
APP-216ENST00000491395 A1BGP04217 495 aa11.07□□□□□ -0.64
APP-216ENST00000491395 DCTN1Q14203 1278 aa11.07□□□□□ -0.64
APP-216ENST00000491395 TBC1D2BQ9UPU7 963 aa11.07□□□□□ -0.64
APP-216ENST00000491395 ADAMTS7Q9UKP4 1686 aa11.06□□□□□ -0.64
APP-216ENST00000491395 C9orf131Q5VYM1 1079 aa11.06□□□□□ -0.64
APP-216ENST00000491395 RTF1Q92541 710 aaKnown RBP11.06□□□□□ -0.64
APP-216ENST00000491395 USP16Q9Y5T5 823 aa11.06□□□□□ -0.64
APP-216ENST00000491395 PRAMEF22A3QJZ6 481 aa11.05□□□□□ -0.64
APP-216ENST00000491395 KIF3CO14782 793 aa11.05□□□□□ -0.64
APP-216ENST00000491395 IL6STP40189 918 aaPredicted RBP11.05□□□□□ -0.64
APP-216ENST00000491395 TBC1D9BQ66K14 1250 aa11.05□□□□□ -0.64
APP-216ENST00000491395 KIAA1551Q9HCM1 1747 aa11.04□□□□□ -0.64
APP-216ENST00000491395 PIP4K2AP48426 406 aaPredicted RBP11.04□□□□□ -0.64
APP-216ENST00000491395 C2CD5Q86YS7 1000 aa11.04□□□□□ -0.64
APP-216ENST00000491395 CCDC24Q8N4L8 307 aa11.04□□□□□ -0.64
APP-216ENST00000491395 MIS18AQ9NYP9 233 aa11.04□□□□□ -0.64
APP-216ENST00000491395 N4BP2Q86UW6 1770 aaPredicted RBP11.03□□□□□ -0.64
APP-216ENST00000491395 KIF13BQ9NQT8 1826 aa11.03□□□□□ -0.64
APP-216ENST00000491395 HTATSF1O43719 755 aaKnown RBP11.03□□□□□ -0.64
APP-216ENST00000491395 NMRK2Q9NPI5 230 aa11.03□□□□□ -0.64
APP-216ENST00000491395 CARMIL3Q8ND23 1372 aa11.03□□□□□ -0.64
APP-216ENST00000491395 H0YIN7 160 aa11.02□□□□□ -0.65
APP-216ENST00000491395 CAMTA2O94983 1202 aa11.02□□□□□ -0.65
APP-216ENST00000491395 SNRPA1P09661 255 aaKnown RBP11.02□□□□□ -0.65
APP-216ENST00000491395 TAF7Q15545 349 aaPredicted RBP11.02□□□□□ -0.65
APP-216ENST00000491395 NPM2Q86SE8 214 aaKnown RBP11.02□□□□□ -0.65
APP-216ENST00000491395 RNF181Q9P0P0 153 aa11.02□□□□□ -0.65
APP-216ENST00000491395 HSPA6P17066 643 aa11.01□□□□□ -0.65
APP-216ENST00000491395 RASSF7Q02833 373 aa11.01□□□□□ -0.65
APP-216ENST00000491395 PRR5LQ6MZQ0 368 aa11.01□□□□□ -0.65
APP-216ENST00000491395 DZIP3Q86Y13 1208 aaKnown RBP11.01□□□□□ -0.65
APP-216ENST00000491395 TTLL6Q8N841 843 aa11.01□□□□□ -0.65
APP-216ENST00000491395 SETDB2Q96T68 719 aa11.01□□□□□ -0.65
APP-216ENST00000491395 NBPF26B4DH59 902 aa11□□□□□ -0.65
APP-216ENST00000491395 NEFMP07197 916 aa11□□□□□ -0.65
APP-216ENST00000491395 NBPF10Q6P3W6 841 aaKnown RBP11□□□□□ -0.65
APP-216ENST00000491395 NBPF15Q8N660 670 aa11□□□□□ -0.65
APP-216ENST00000491395 ZNF622Q969S3 477 aaKnown RBP eCLIP11□□□□□ -0.65
APP-216ENST00000491395 PLEKHF1Q96S99 279 aa11□□□□□ -0.65
APP-216ENST00000491395 BRIP1Q9BX63 1249 aa11□□□□□ -0.65
APP-216ENST00000491395 ZNF219Q9P2Y4 722 aaPredicted RBP11□□□□□ -0.65
APP-216ENST00000491395 UBR2Q8IWV8 1755 aa11□□□□□ -0.65
APP-216ENST00000491395 TOMM70O94826 608 aa10.99□□□□□ -0.65
APP-216ENST00000491395 PDE6BP35913 854 aa10.99□□□□□ -0.65
APP-216ENST00000491395 PRELPP51888 382 aa10.99□□□□□ -0.65
APP-216ENST00000491395 NFE2L2Q16236 605 aa10.99□□□□□ -0.65
APP-216ENST00000491395 THUMPD2Q9BTF0 503 aaKnown RBP10.99□□□□□ -0.65
APP-216ENST00000491395 CNBD1Q8NA66 436 aa10.98□□□□□ -0.65
APP-216ENST00000491395 RRAGCQ9HB90 399 aa10.98□□□□□ -0.65
APP-216ENST00000491395 NFKBIEO00221 500 aa10.97□□□□□ -0.65
APP-216ENST00000491395 NPHP1O15259 732 aa10.97□□□□□ -0.65
APP-216ENST00000491395 LMNB1P20700 586 aa10.97□□□□□ -0.65
APP-216ENST00000491395 DDX10Q13206 875 aaKnown RBP10.97□□□□□ -0.65
APP-216ENST00000491395 CLEC4GQ6UXB4 293 aa10.97□□□□□ -0.65
APP-216ENST00000491395 NBPF5PQ86XG9 351 aaPredicted RBP10.97□□□□□ -0.65
APP-216ENST00000491395 PNISRQ8TF01 805 aaKnown RBP10.97□□□□□ -0.65
APP-216ENST00000491395 PDZRN3Q9UPQ7 1066 aa10.97□□□□□ -0.65
APP-216ENST00000491395 SIPA1L3O60292 1781 aaPredicted RBP10.96□□□□□ -0.65
APP-216ENST00000491395 KDM2BQ8NHM5 1336 aa10.96□□□□□ -0.65
APP-216ENST00000491395 C21orf2O43822 256 aa10.96□□□□□ -0.65
APP-216ENST00000491395 EIF4A1P60842 406 aaKnown RBP10.96□□□□□ -0.65
APP-216ENST00000491395 ST5P78524 1137 aa10.96□□□□□ -0.65
APP-216ENST00000491395 RALBP1Q15311 655 aa10.96□□□□□ -0.65
APP-216ENST00000491395 HLFQ16534 295 aa10.96□□□□□ -0.65
APP-216ENST00000491395 NGEFQ8N5V2 710 aa10.96□□□□□ -0.65
APP-216ENST00000491395 PNNQ9H307 717 aaKnown RBP10.96□□□□□ -0.65
APP-216ENST00000491395 NIP7Q9Y221 180 aaKnown RBP eCLIP10.96□□□□□ -0.65
APP-216ENST00000491395 ZNF652Q9Y2D9 606 aa10.96□□□□□ -0.65
APP-216ENST00000491395 NRXN2Q9P2S2 1712 aa10.95□□□□□ -0.66
APP-216ENST00000491395 MAPK8IP3Q9UPT6 1336 aa10.95□□□□□ -0.66
APP-216ENST00000491395 FAM177BA6PVY3 158 aa10.95□□□□□ -0.66
APP-216ENST00000491395 SRGNP10124 158 aa10.95□□□□□ -0.66
APP-216ENST00000491395 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms