RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 USP42Q9H9J4 1324 aaKnown RBP11.51□□□□□ -0.57
GABRE-211ENST00000491339 BCORQ6W2J9 1755 aa11.51□□□□□ -0.57
GABRE-211ENST00000491339 KDM3BQ7LBC6 1761 aa11.51□□□□□ -0.57
GABRE-211ENST00000491339 HEG1Q9ULI3 1381 aa11.51□□□□□ -0.57
GABRE-211ENST00000491339 PHACTR3Q96KR7 559 aa11.51□□□□□ -0.57
GABRE-211ENST00000491339 BRCA1P38398 1863 aaKnown RBP11.5□□□□□ -0.57
GABRE-211ENST00000491339 GRIN3BO60391 1043 aa11.5□□□□□ -0.57
GABRE-211ENST00000491339 ZPR1O75312 459 aa11.5□□□□□ -0.57
GABRE-211ENST00000491339 STARD3NLO95772 234 aa11.5□□□□□ -0.57
GABRE-211ENST00000491339 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
GABRE-211ENST00000491339 ZNF790Q6PG37 636 aa11.5□□□□□ -0.57
GABRE-211ENST00000491339 IL17REQ8NFR9 667 aa11.5□□□□□ -0.57
GABRE-211ENST00000491339 FMNL2Q96PY5 1086 aa11.5□□□□□ -0.57
GABRE-211ENST00000491339 PARP3Q9Y6F1 533 aa11.5□□□□□ -0.57
GABRE-211ENST00000491339 SOS1Q07889 1333 aaPredicted RBP11.5□□□□□ -0.57
GABRE-211ENST00000491339 MYBBP1AQ9BQG0 1328 aaKnown RBP11.5□□□□□ -0.57
GABRE-211ENST00000491339 BTBD11A6QL63 1104 aa11.5□□□□□ -0.57
GABRE-211ENST00000491339 HTATSF1O43719 755 aaKnown RBP11.5□□□□□ -0.57
GABRE-211ENST00000491339 CYP19A1P11511 503 aaPredicted RBP11.5□□□□□ -0.57
GABRE-211ENST00000491339 GYS1P13807 737 aa11.5□□□□□ -0.57
GABRE-211ENST00000491339 TEX13AQ9BXU3 409 aaPredicted RBP11.5□□□□□ -0.57
GABRE-211ENST00000491339 AFDNP55196 1824 aaKnown RBP11.5□□□□□ -0.57
GABRE-211ENST00000491339 INTS5Q6P9B9 1019 aaKnown RBP11.49□□□□□ -0.57
GABRE-211ENST00000491339 NPM2Q86SE8 214 aaKnown RBP11.49□□□□□ -0.57
GABRE-211ENST00000491339 ZBTB1Q9Y2K1 713 aa11.48□□□□□ -0.57
GABRE-211ENST00000491339 PXDNLA1KZ92 1463 aa11.48□□□□□ -0.57
GABRE-211ENST00000491339 ARFGEF1Q9Y6D6 1849 aa11.48□□□□□ -0.57
GABRE-211ENST00000491339 A0A087WZG4 1122 aa11.48□□□□□ -0.57
GABRE-211ENST00000491339 ZNF496Q96IT1 587 aaPredicted RBP11.48□□□□□ -0.57
GABRE-211ENST00000491339 NRXN2Q9P2S2 1712 aa11.48□□□□□ -0.57
GABRE-211ENST00000491339 MCM10Q7L590 875 aa11.47□□□□□ -0.57
GABRE-211ENST00000491339 SRP68Q9UHB9 627 aaKnown RBP11.47□□□□□ -0.57
GABRE-211ENST00000491339 DLEC1Q9Y238 1755 aa11.47□□□□□ -0.57
GABRE-211ENST00000491339 YBX3P16989 372 aaKnown RBP eCLIP11.46□□□□□ -0.57
GABRE-211ENST00000491339 CANXP27824 592 aaKnown RBP11.46□□□□□ -0.57
GABRE-211ENST00000491339 USPL1Q5W0Q7 1092 aa11.46□□□□□ -0.57
GABRE-211ENST00000491339 NARFQ9UHQ1 456 aa11.46□□□□□ -0.57
GABRE-211ENST00000491339 TGFB2P61812 414 aa11.45□□□□□ -0.58
GABRE-211ENST00000491339 WDR43Q15061 677 aaKnown RBP eCLIP11.45□□□□□ -0.58
GABRE-211ENST00000491339 NFE2L2Q16236 605 aa11.45□□□□□ -0.58
GABRE-211ENST00000491339 PNISRQ8TF01 805 aaKnown RBP11.45□□□□□ -0.58
GABRE-211ENST00000491339 ZNF330Q9Y3S2 320 aaPredicted RBP11.45□□□□□ -0.58
GABRE-211ENST00000491339 FKBP8Q14318 412 aa11.45□□□□□ -0.58
GABRE-211ENST00000491339 GOLGB1Q14789 3259 aaKnown RBP11.45□□□□□ -0.58
GABRE-211ENST00000491339 UTRNP46939 3433 aa11.44□□□□□ -0.58
GABRE-211ENST00000491339 LMOD3Q0VAK6 560 aa11.44□□□□□ -0.58
GABRE-211ENST00000491339 DCTN1Q14203 1278 aa11.44□□□□□ -0.58
GABRE-211ENST00000491339 SNRPA1P09661 255 aaKnown RBP11.44□□□□□ -0.58
GABRE-211ENST00000491339 IL6STP40189 918 aaPredicted RBP11.44□□□□□ -0.58
GABRE-211ENST00000491339 PLEKHF1Q96S99 279 aa11.44□□□□□ -0.58
GABRE-211ENST00000491339 DDR1Q08345 913 aa11.43□□□□□ -0.58
GABRE-211ENST00000491339 TAF7Q15545 349 aaPredicted RBP11.43□□□□□ -0.58
GABRE-211ENST00000491339 POLRMTO00411 1230 aaKnown RBP11.42□□□□□ -0.58
GABRE-211ENST00000491339 EIF5P55010 431 aaKnown RBP11.42□□□□□ -0.58
GABRE-211ENST00000491339 LHX8Q68G74 356 aa11.42□□□□□ -0.58
GABRE-211ENST00000491339 WWC3Q9ULE0 1092 aa11.42□□□□□ -0.58
GABRE-211ENST00000491339 CARMIL3Q8ND23 1372 aa11.42□□□□□ -0.58
GABRE-211ENST00000491339 KCNQ3O43525 872 aa11.42□□□□□ -0.58
GABRE-211ENST00000491339 ZNF784Q8NCA9 323 aaPredicted RBP11.42□□□□□ -0.58
GABRE-211ENST00000491339 ANKRD31Q8N7Z5 1873 aa11.41□□□□□ -0.58
GABRE-211ENST00000491339 CACNA1SQ13698 1873 aa11.41□□□□□ -0.58
GABRE-211ENST00000491339 NFIXQ14938 502 aa11.4□□□□□ -0.58
GABRE-211ENST00000491339 BCS1LQ9Y276 419 aa11.4□□□□□ -0.58
GABRE-211ENST00000491339 ZNF652Q9Y2D9 606 aa11.4□□□□□ -0.58
GABRE-211ENST00000491339 COL11A2P13942 1736 aaPredicted RBP11.4□□□□□ -0.58
GABRE-211ENST00000491339 A0A0G2JLW4 131 aa11.4□□□□□ -0.58
GABRE-211ENST00000491339 NPHP1O15259 732 aa11.4□□□□□ -0.58
GABRE-211ENST00000491339 DPEP1P16444 411 aa11.4□□□□□ -0.58
GABRE-211ENST00000491339 TM4SF1P30408 202 aa11.4□□□□□ -0.58
GABRE-211ENST00000491339 DZIP3Q86Y13 1208 aaKnown RBP11.4□□□□□ -0.58
GABRE-211ENST00000491339 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
GABRE-211ENST00000491339 ARFGEF2Q9Y6D5 1785 aa11.4□□□□□ -0.59
GABRE-211ENST00000491339 A1BGP04217 495 aa11.39□□□□□ -0.59
GABRE-211ENST00000491339 RIPK4P57078 832 aa11.39□□□□□ -0.59
GABRE-211ENST00000491339 ZNF316A6NFI3 1004 aaPredicted RBP11.39□□□□□ -0.59
GABRE-211ENST00000491339 SERPINB2P05120 415 aa11.39□□□□□ -0.59
GABRE-211ENST00000491339 BICDL1Q6ZP65 573 aa11.39□□□□□ -0.59
GABRE-211ENST00000491339 BCL2L12Q9HB09 334 aa11.39□□□□□ -0.59
GABRE-211ENST00000491339 PIM2Q9P1W9 311 aa11.39□□□□□ -0.59
GABRE-211ENST00000491339 ATP10DQ9P241 1426 aa11.39□□□□□ -0.59
GABRE-211ENST00000491339 TBC1D2BQ9UPU7 963 aa11.39□□□□□ -0.59
GABRE-211ENST00000491339 NUP98P52948 1817 aa11.38□□□□□ -0.59
GABRE-211ENST00000491339 RUNDC1Q96C34 613 aa11.38□□□□□ -0.59
GABRE-211ENST00000491339 TSPYL4Q9UJ04 414 aa11.38□□□□□ -0.59
GABRE-211ENST00000491339 USP16Q9Y5T5 823 aa11.38□□□□□ -0.59
GABRE-211ENST00000491339 ADCY9O60503 1353 aa11.38□□□□□ -0.59
GABRE-211ENST00000491339 TMPOP42166 694 aaKnown RBP11.37□□□□□ -0.59
GABRE-211ENST00000491339 DALRD3Q5D0E6 543 aaKnown RBP11.37□□□□□ -0.59
GABRE-211ENST00000491339 CCDC146Q8IYE0 955 aa11.37□□□□□ -0.59
GABRE-211ENST00000491339 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
GABRE-211ENST00000491339 ANKRD36CQ5JPF3 1778 aa11.37□□□□□ -0.59
GABRE-211ENST00000491339 PRAMEF22A3QJZ6 481 aa11.37□□□□□ -0.59
GABRE-211ENST00000491339 CAMTA2O94983 1202 aa11.37□□□□□ -0.59
GABRE-211ENST00000491339 ST5P78524 1137 aa11.37□□□□□ -0.59
GABRE-211ENST00000491339 TBC1D9BQ66K14 1250 aa11.37□□□□□ -0.59
GABRE-211ENST00000491339 SETDB2Q96T68 719 aa11.37□□□□□ -0.59
GABRE-211ENST00000491339 BABAM1Q9NWV8 329 aa11.37□□□□□ -0.59
GABRE-211ENST00000491339 MIS18AQ9NYP9 233 aa11.37□□□□□ -0.59
GABRE-211ENST00000491339 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
GABRE-211ENST00000491339 TIAM2Q8IVF5 1701 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms