RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 LINS1Q8NG48 757 aa8.84□□□□□ -1
NPHP3-208ENST00000490993 ZCRB1Q8TBF4 217 aaKnown RBP8.84□□□□□ -1
NPHP3-208ENST00000490993 PTPRUQ92729 1446 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 H3BQV1 296 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 GNL2Q13823 731 aaKnown RBP8.83□□□□□ -1
NPHP3-208ENST00000490993 IFFO2Q5TF58 517 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 MCTP1Q6DN14 999 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 ECHDC1Q9NTX5 307 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 KIF20BQ96Q89 1820 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 AOX1Q06278 1338 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 OVOS2A0A0J9YW53 1432 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 OVOS2Q6IE36 1432 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 MBD3O95983 291 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 RBM25P49756 843 aaKnown RBP8.83□□□□□ -1
NPHP3-208ENST00000490993 MRE11P49959 708 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 CD163L1Q9NR16 1453 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 G2E3Q7L622 706 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 EVI5LQ96CN4 794 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 SIL1Q9H173 461 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 CCDC57Q2TAC2 916 aa8.83□□□□□ -1
NPHP3-208ENST00000490993 PDCP20941 246 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 ANAPC15P60006 121 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 EIF4A1P60842 406 aaKnown RBP8.82□□□□□ -1
NPHP3-208ENST00000490993 KRT32Q14532 448 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 HSP90AB3PQ58FF7 597 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 ANKRD13DQ6ZTN6 518 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 IL17REQ8NFR9 667 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 ITSN1Q15811 1721 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 FOXD4L5Q5VV16 416 aaPredicted RBP8.82□□□□□ -1
NPHP3-208ENST00000490993 FOXD4L4Q8WXT5 416 aaPredicted RBP8.82□□□□□ -1
NPHP3-208ENST00000490993 DDX21Q9NR30 783 aaKnown RBP eCLIP8.82□□□□□ -1
NPHP3-208ENST00000490993 TTC41PQ6P2S7 1318 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 COL3A1P02461 1466 aaPredicted RBP8.82□□□□□ -1
NPHP3-208ENST00000490993 GRM8O00222 908 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 CHRNA2Q15822 529 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 ARHGEF25Q86VW2 580 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 DNAJC2Q99543 621 aaKnown RBP8.82□□□□□ -1
NPHP3-208ENST00000490993 USP19O94966 1318 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 PCDH11XQ9BZA7 1347 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 PCDH11YQ9BZA8 1340 aa8.82□□□□□ -1
NPHP3-208ENST00000490993 WDR33Q9C0J8 1336 aaKnown RBP8.81□□□□□ -1
NPHP3-208ENST00000490993 CWC27Q6UX04 472 aaKnown RBP8.81□□□□□ -1
NPHP3-208ENST00000490993 SEC24BO95487 1268 aa8.81□□□□□ -1
NPHP3-208ENST00000490993 MAP4K4O95819 1239 aaPredicted RBP8.81□□□□□ -1
NPHP3-208ENST00000490993 TRDNQ13061 729 aa8.81□□□□□ -1
NPHP3-208ENST00000490993 CPLX2Q6PUV4 134 aaKnown RBP8.81□□□□□ -1
NPHP3-208ENST00000490993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.81□□□□□ -18e-7■■■□□ 18.1
NPHP3-208ENST00000490993 CEP126Q9P2H0 1117 aa8.81□□□□□ -1
NPHP3-208ENST00000490993 AKAP2Q9Y2D5 859 aa8.81□□□□□ -1
NPHP3-208ENST00000490993 TTC39AQ5SRH9 613 aa8.81□□□□□ -1
NPHP3-208ENST00000490993 SLIT1O75093 1534 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 IL2RBP14784 551 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 PLCB2Q00722 1185 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 ZSCAN25Q6NSZ9 544 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.8□□□□□ -11e-8■■■■■ 50
NPHP3-208ENST00000490993 SLC52A2Q9HAB3 445 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 LGR6Q9HBX8 967 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 CWC25Q9NXE8 425 aaPredicted RBP8.8□□□□□ -1
NPHP3-208ENST00000490993 A0A087WZG4 1122 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 LETM1O95202 739 aaPredicted RBP8.8□□□□□ -1
NPHP3-208ENST00000490993 XAGE3Q8WTP9 111 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 PHAXQ9H814 394 aaKnown RBP8.8□□□□□ -1
NPHP3-208ENST00000490993 TBC1D2BQ9UPU7 963 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 NCAPD2Q15021 1401 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 ZNF790Q6PG37 636 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 ESYT1Q9BSJ8 1104 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 PDRG1Q9NUG6 133 aa8.8□□□□□ -1
NPHP3-208ENST00000490993 NRDCO43847 1150 aa8.79□□□□□ -1
NPHP3-208ENST00000490993 WASHC4Q2M389 1173 aa8.79□□□□□ -1
NPHP3-208ENST00000490993 C16orf71Q8IYS4 520 aaPredicted RBP8.79□□□□□ -1
NPHP3-208ENST00000490993 NFATC2IPQ8NCF5 419 aa8.79□□□□□ -1
NPHP3-208ENST00000490993 ADGRB2O60241 1585 aa8.79□□□□□ -1
NPHP3-208ENST00000490993 EPB41L2O43491 1005 aaKnown RBP8.79□□□□□ -1
NPHP3-208ENST00000490993 SYNE3Q6ZMZ3 975 aa8.79□□□□□ -1
NPHP3-208ENST00000490993 COPS6Q7L5N1 327 aa8.79□□□□□ -1
NPHP3-208ENST00000490993 TMEM94Q12767 1356 aa8.79□□□□□ -1
NPHP3-208ENST00000490993 CNNM1Q9NRU3 951 aa8.79□□□□□ -1
NPHP3-208ENST00000490993 CEP170BQ9Y4F5 1589 aaPredicted RBP8.79□□□□□ -1
NPHP3-208ENST00000490993 EXOC5O00471 708 aa8.79□□□□□ -1
NPHP3-208ENST00000490993 PTCD1O75127 700 aaKnown RBP8.79□□□□□ -1
NPHP3-208ENST00000490993 ANXA1P04083 346 aa8.79□□□□□ -1
NPHP3-208ENST00000490993 SH2B1Q9NRF2 756 aaPredicted RBP8.79□□□□□ -1
NPHP3-208ENST00000490993 BLOC1S2Q6QNY1 142 aa8.78□□□□□ -1
NPHP3-208ENST00000490993 RALYLQ86SE5 291 aaKnown RBP8.78□□□□□ -1
NPHP3-208ENST00000490993 CTNNA3Q9UI47 895 aa8.78□□□□□ -1
NPHP3-208ENST00000490993 SLC39A6Q13433 755 aa8.78□□□□□ -1
NPHP3-208ENST00000490993 TMX4Q9H1E5 349 aaPredicted RBP8.78□□□□□ -1
NPHP3-208ENST00000490993 ARHGAP23Q9P227 1491 aa8.78□□□□□ -1
NPHP3-208ENST00000490993 VPS37CA5D8V6 355 aaPredicted RBP8.78□□□□□ -1
NPHP3-208ENST00000490993 CCDC34Q96HJ3 373 aa8.78□□□□□ -1
NPHP3-208ENST00000490993 JAKMIP1Q96N16 626 aaKnown RBP8.78□□□□□ -1
NPHP3-208ENST00000490993 USP26Q9BXU7 913 aa8.78□□□□□ -1
NPHP3-208ENST00000490993 RTN4Q9NQC3 1192 aaKnown RBP8.78□□□□□ -1
NPHP3-208ENST00000490993 KIAA2012Q0VF49 1180 aa8.78□□□□□ -1
NPHP3-208ENST00000490993 CABLES1Q8TDN4 633 aa8.78□□□□□ -1
NPHP3-208ENST00000490993 APPP05067 770 aa8.77□□□□□ -1
NPHP3-208ENST00000490993 DNTTIP2Q5QJE6 756 aaKnown RBP8.77□□□□□ -1
NPHP3-208ENST00000490993 MYO5BQ9ULV0 1848 aa8.77□□□□□ -1.01
NPHP3-208ENST00000490993 CPLX1O14810 134 aa8.77□□□□□ -1.01
NPHP3-208ENST00000490993 KDRP35968 1356 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms