RNA–Protein interactions for RNA: ENST00000490903.5

CKAP2-207, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CKAP2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-207ENST00000490903 KCNQ3O43525 872 aa7.22□□□□□ -1.25
CKAP2-207ENST00000490903 MCM10Q7L590 875 aa7.22□□□□□ -1.25
CKAP2-207ENST00000490903 ZNF496Q96IT1 587 aaPredicted RBP7.22□□□□□ -1.25
CKAP2-207ENST00000490903 BTBD11A6QL63 1104 aa7.21□□□□□ -1.25
CKAP2-207ENST00000490903 NEFMP07197 916 aa7.21□□□□□ -1.25
CKAP2-207ENST00000490903 PPP2R1AP30153 589 aa7.21□□□□□ -1.25
CKAP2-207ENST00000490903 TGFB2P61812 414 aa7.21□□□□□ -1.25
CKAP2-207ENST00000490903 DDR1Q08345 913 aa7.21□□□□□ -1.25
CKAP2-207ENST00000490903 ATP10DQ9P241 1426 aa7.21□□□□□ -1.26
CKAP2-207ENST00000490903 USP42Q9H9J4 1324 aaKnown RBP7.21□□□□□ -1.26
CKAP2-207ENST00000490903 A1BGP04217 495 aa7.21□□□□□ -1.26
CKAP2-207ENST00000490903 PIM2Q9P1W9 311 aa7.21□□□□□ -1.26
CKAP2-207ENST00000490903 ZNF790Q6PG37 636 aa7.2□□□□□ -1.26
CKAP2-207ENST00000490903 NGEFQ8N5V2 710 aa7.2□□□□□ -1.26
CKAP2-207ENST00000490903 MIS18AQ9NYP9 233 aa7.2□□□□□ -1.26
CKAP2-207ENST00000490903 UBR3Q6ZT12 1888 aa7.2□□□□□ -1.26
CKAP2-207ENST00000490903 FAM177BA6PVY3 158 aa7.2□□□□□ -1.26
CKAP2-207ENST00000490903 NFIXQ14938 502 aa7.2□□□□□ -1.26
CKAP2-207ENST00000490903 DALRD3Q5D0E6 543 aaKnown RBP7.2□□□□□ -1.26
CKAP2-207ENST00000490903 SERPINB2P05120 415 aa7.2□□□□□ -1.26
CKAP2-207ENST00000490903 ZNF622Q969S3 477 aaKnown RBP eCLIP7.2□□□□□ -1.263e-8■■□□□ 13
CKAP2-207ENST00000490903 QSER1Q2KHR3 1735 aa7.2□□□□□ -1.26
CKAP2-207ENST00000490903 FMNL2Q96PY5 1086 aa7.19□□□□□ -1.26
CKAP2-207ENST00000490903 NARFQ9UHQ1 456 aa7.19□□□□□ -1.26
CKAP2-207ENST00000490903 SOS1Q07889 1333 aaPredicted RBP7.19□□□□□ -1.26
CKAP2-207ENST00000490903 MYH14Q7Z406 1995 aaKnown RBP7.19□□□□□ -1.26
CKAP2-207ENST00000490903 POLRMTO00411 1230 aaKnown RBP7.19□□□□□ -1.26
CKAP2-207ENST00000490903 C9orf131Q5VYM1 1079 aa7.19□□□□□ -1.26
CKAP2-207ENST00000490903 RSPH6AQ9H0K4 717 aa7.19□□□□□ -1.26
CKAP2-207ENST00000490903 PRAMEF22A3QJZ6 481 aa7.19□□□□□ -1.26
CKAP2-207ENST00000490903 KCNA4P22459 653 aa7.19□□□□□ -1.26
CKAP2-207ENST00000490903 DDX10Q13206 875 aaKnown RBP7.19□□□□□ -1.26
CKAP2-207ENST00000490903 RNF181Q9P0P0 153 aa7.19□□□□□ -1.26
CKAP2-207ENST00000490903 USP16Q9Y5T5 823 aa7.19□□□□□ -1.26
CKAP2-207ENST00000490903 CICQ96RK0 1608 aaPredicted RBP7.18□□□□□ -1.26
CKAP2-207ENST00000490903 TM4SF1P30408 202 aa7.18□□□□□ -1.26
CKAP2-207ENST00000490903 C2CD5Q86YS7 1000 aa7.18□□□□□ -1.26
CKAP2-207ENST00000490903 COL15A1P39059 1388 aa7.18□□□□□ -1.26
CKAP2-207ENST00000490903 CEP350Q5VT06 3117 aa7.18□□□□□ -1.26
CKAP2-207ENST00000490903 KCNA3P22001 575 aa7.18□□□□□ -1.26
CKAP2-207ENST00000490903 TEX13AQ9BXU3 409 aaPredicted RBP7.18□□□□□ -1.26
CKAP2-207ENST00000490903 PXDNLA1KZ92 1463 aa7.17□□□□□ -1.26
CKAP2-207ENST00000490903 TBC1D9BQ66K14 1250 aa7.17□□□□□ -1.26
CKAP2-207ENST00000490903 VSIG10Q8N0Z9 540 aa7.17□□□□□ -1.26
CKAP2-207ENST00000490903 THUMPD2Q9BTF0 503 aaKnown RBP7.17□□□□□ -1.26
CKAP2-207ENST00000490903 BCL2L12Q9HB09 334 aa7.17□□□□□ -1.26
CKAP2-207ENST00000490903 PLEKHG2Q9H7P9 1386 aa7.17□□□□□ -1.26
CKAP2-207ENST00000490903 A0A087WZG4 1122 aa7.17□□□□□ -1.26
CKAP2-207ENST00000490903 H0YIN7 160 aa7.17□□□□□ -1.26
CKAP2-207ENST00000490903 NEUROD2Q15784 382 aa7.17□□□□□ -1.26
CKAP2-207ENST00000490903 C16orf71Q8IYS4 520 aaPredicted RBP7.17□□□□□ -1.26
CKAP2-207ENST00000490903 NMRK2Q9NPI5 230 aa7.17□□□□□ -1.26
CKAP2-207ENST00000490903 EIF5P55010 431 aaKnown RBP7.17□□□□□ -1.26
CKAP2-207ENST00000490903 DZIP3Q86Y13 1208 aaKnown RBP7.17□□□□□ -1.26
CKAP2-207ENST00000490903 SETDB2Q96T68 719 aa7.17□□□□□ -1.26
CKAP2-207ENST00000490903 RRP7AQ9Y3A4 280 aaKnown RBP7.17□□□□□ -1.26
CKAP2-207ENST00000490903 NPC1L1Q9UHC9 1359 aa7.16□□□□□ -1.26
CKAP2-207ENST00000490903 HEG1Q9ULI3 1381 aa7.16□□□□□ -1.26
CKAP2-207ENST00000490903 GTF2E1P29083 439 aaPredicted RBP7.16□□□□□ -1.26
CKAP2-207ENST00000490903 RASSF7Q02833 373 aa7.16□□□□□ -1.26
CKAP2-207ENST00000490903 TTLL6Q8N841 843 aa7.16□□□□□ -1.26
CKAP2-207ENST00000490903 MAPK8IP3Q9UPT6 1336 aa7.16□□□□□ -1.26
CKAP2-207ENST00000490903 N4BP2Q86UW6 1770 aaPredicted RBP7.16□□□□□ -1.26
CKAP2-207ENST00000490903 SNRPA1P09661 255 aaKnown RBP7.16□□□□□ -1.26
CKAP2-207ENST00000490903 C10orf71Q711Q0 1435 aa7.15□□□□□ -1.26
CKAP2-207ENST00000490903 TAF7Q15545 349 aaPredicted RBP7.15□□□□□ -1.26
CKAP2-207ENST00000490903 RRAGCQ9HB90 399 aa7.15□□□□□ -1.26
CKAP2-207ENST00000490903 C21orf2O43822 256 aa7.15□□□□□ -1.27
CKAP2-207ENST00000490903 IL6STP40189 918 aaPredicted RBP7.15□□□□□ -1.27
CKAP2-207ENST00000490903 SCN11AQ9UI33 1791 aa7.14□□□□□ -1.27
CKAP2-207ENST00000490903 KIF3CO14782 793 aa7.14□□□□□ -1.27
CKAP2-207ENST00000490903 MYL6BP14649 208 aa7.14□□□□□ -1.27
CKAP2-207ENST00000490903 NBPF5PQ86XG9 351 aaPredicted RBP7.14□□□□□ -1.27
CKAP2-207ENST00000490903 CNBD1Q8NA66 436 aa7.14□□□□□ -1.27
CKAP2-207ENST00000490903 LAS1LQ9Y4W2 734 aaKnown RBP7.14□□□□□ -1.27
CKAP2-207ENST00000490903 U3KPZ7 1027 aaPredicted RBP7.14□□□□□ -1.27
CKAP2-207ENST00000490903 EIF2S2P20042 333 aaKnown RBP7.14□□□□□ -1.27
CKAP2-207ENST00000490903 NECTIN2Q92692 538 aa7.14□□□□□ -1.27
CKAP2-207ENST00000490903 COL24A1Q17RW2 1714 aa7.14□□□□□ -1.27
CKAP2-207ENST00000490903 PRR5LQ6MZQ0 368 aa7.14□□□□□ -1.27
CKAP2-207ENST00000490903 CCDC146Q8IYE0 955 aa7.14□□□□□ -1.27
CKAP2-207ENST00000490903 ZNF428Q96B54 188 aa7.14□□□□□ -1.27
CKAP2-207ENST00000490903 NIP7Q9Y221 180 aaKnown RBP eCLIP7.14□□□□□ -1.27
CKAP2-207ENST00000490903 COL3A1P02461 1466 aaPredicted RBP7.14□□□□□ -1.27
CKAP2-207ENST00000490903 TCERG1O14776 1098 aaKnown RBP7.13□□□□□ -1.27
CKAP2-207ENST00000490903 HSPA6P17066 643 aa7.13□□□□□ -1.27
CKAP2-207ENST00000490903 PDE6BP35913 854 aa7.13□□□□□ -1.27
CKAP2-207ENST00000490903 ST5P78524 1137 aa7.13□□□□□ -1.27
CKAP2-207ENST00000490903 CARMIL3Q8ND23 1372 aa7.13□□□□□ -1.27
CKAP2-207ENST00000490903 C4AP0C0L4 1744 aa7.13□□□□□ -1.27
CKAP2-207ENST00000490903 CAMTA2O94983 1202 aa7.13□□□□□ -1.27
CKAP2-207ENST00000490903 HTRA3P83110 453 aa7.13□□□□□ -1.27
CKAP2-207ENST00000490903 KCPQ6ZWJ8 1503 aa7.13□□□□□ -1.27
CKAP2-207ENST00000490903 GPTP24298 496 aa7.12□□□□□ -1.27
CKAP2-207ENST00000490903 RIPK4P57078 832 aa7.12□□□□□ -1.27
CKAP2-207ENST00000490903 BRIP1Q9BX63 1249 aa7.12□□□□□ -1.27
CKAP2-207ENST00000490903 ZNF652Q9Y2D9 606 aa7.12□□□□□ -1.27
CKAP2-207ENST00000490903 KDM2BQ8NHM5 1336 aa7.12□□□□□ -1.27
CKAP2-207ENST00000490903 NBPF26B4DH59 902 aa7.12□□□□□ -1.27
CKAP2-207ENST00000490903 TOMM70O94826 608 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms