RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 DDX58O95786 925 aaKnown RBP15.13■□□□□ 0.01
SHOX2-205ENST00000490689 ISM2Q6H9L7 571 aa15.13■□□□□ 0.01
SHOX2-205ENST00000490689 NCKAP5LQ9HCH0 1330 aa15.13■□□□□ 0.01
SHOX2-205ENST00000490689 TYRO3Q06418 890 aa15.13■□□□□ 0.01
SHOX2-205ENST00000490689 CFAP45Q9UL16 551 aa15.13■□□□□ 0.01
SHOX2-205ENST00000490689 DUOX2Q9NRD8 1548 aa15.13■□□□□ 0.01
SHOX2-205ENST00000490689 USHBP1Q8N6Y0 703 aa15.13■□□□□ 0.01
SHOX2-205ENST00000490689 SH2B1Q9NRF2 756 aaPredicted RBP15.13■□□□□ 0.01
SHOX2-205ENST00000490689 MSH6P52701 1360 aa15.12■□□□□ 0.01
SHOX2-205ENST00000490689 ABCC2Q92887 1545 aa15.12■□□□□ 0.01
SHOX2-205ENST00000490689 URI1O94763 535 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-205ENST00000490689 ANAPC15P60006 121 aa15.12■□□□□ 0.01
SHOX2-205ENST00000490689 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
SHOX2-205ENST00000490689 INTS4Q96HW7 963 aaKnown RBP15.12■□□□□ 0.01
SHOX2-205ENST00000490689 ZFP91Q96JP5 570 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-205ENST00000490689 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
SHOX2-205ENST00000490689 SKILP12757 684 aa15.12■□□□□ 0.01
SHOX2-205ENST00000490689 RASSF8Q8NHQ8 419 aa15.12■□□□□ 0.01
SHOX2-205ENST00000490689 LRRC2Q9BYS8 371 aa15.12■□□□□ 0.01
SHOX2-205ENST00000490689 ZMYM3Q14202 1370 aa15.12■□□□□ 0.01
SHOX2-205ENST00000490689 SFPQP23246 707 aaKnown RBP eCLIP15.11■□□□□ 0.01
SHOX2-205ENST00000490689 ZNF396Q96N95 335 aaPredicted RBP15.11■□□□□ 0.01
SHOX2-205ENST00000490689 GTPBP4Q9BZE4 634 aaKnown RBP15.11■□□□□ 0.01
SHOX2-205ENST00000490689 BRPF1P55201 1214 aaPredicted RBP15.11■□□□□ 0.01
SHOX2-205ENST00000490689 CCT2P78371 535 aaKnown RBP15.11■□□□□ 0.01
SHOX2-205ENST00000490689 ABTB2Q8N961 1025 aa15.1■□□□□ 0.01
SHOX2-205ENST00000490689 KIF2CQ99661 725 aa15.1■□□□□ 0.01
SHOX2-205ENST00000490689 EID1Q9Y6B2 187 aa15.1■□□□□ 0.01
SHOX2-205ENST00000490689 HIP1O00291 1037 aa15.1■□□□□ 0.01
SHOX2-205ENST00000490689 CPLX2Q6PUV4 134 aaKnown RBP15.1■□□□□ 0.01
SHOX2-205ENST00000490689 DDX19AQ9NUU7 478 aaKnown RBP15.1■□□□□ 0.01
SHOX2-205ENST00000490689 TRIM29Q14134 588 aa15.1■□□□□ 0.01
SHOX2-205ENST00000490689 TMCO3Q6UWJ1 677 aa15.1■□□□□ 0.01
SHOX2-205ENST00000490689 OLFM4Q6UX06 510 aa15.1■□□□□ 0.01
SHOX2-205ENST00000490689 RALYLQ86SE5 291 aaKnown RBP15.1■□□□□ 0.01
SHOX2-205ENST00000490689 PLEKHF1Q96S99 279 aa15.1■□□□□ 0.01
SHOX2-205ENST00000490689 MYL6BP14649 208 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 LRMPQ12912 555 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 KDM5DQ9BY66 1539 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 PNMA6EA0A0J9YXQ4 647 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 CFAP100Q494V2 611 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 HSP90B2PQ58FF3 399 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 NFXL1Q6ZNB6 911 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 ERC1Q8IUD2 1116 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 KRT222Q8N1A0 295 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 CCDC34Q96HJ3 373 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 SLC26A8Q96RN1 970 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 PI4KAP2A4QPH2 592 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 GNAT3A8MTJ3 354 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 PI4KAP1Q8N8J0 262 aa15.09■□□□□ 0.01
SHOX2-205ENST00000490689 ATP8B2P98198 1209 aa15.08■□□□□ 0.01
SHOX2-205ENST00000490689 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0.01
SHOX2-205ENST00000490689 TMC6Q7Z403 805 aa15.08■□□□□ 0
SHOX2-205ENST00000490689 TRDNQ13061 729 aa15.08■□□□□ 0
SHOX2-205ENST00000490689 FSIP1Q8NA03 581 aa15.08■□□□□ 0
SHOX2-205ENST00000490689 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0
SHOX2-205ENST00000490689 PYCARDQ9ULZ3 195 aa15.08■□□□□ 0
SHOX2-205ENST00000490689 PAXBP1Q9Y5B6 917 aa15.07■□□□□ 0
SHOX2-205ENST00000490689 ADGRL1O94910 1474 aa15.07■□□□□ 0
SHOX2-205ENST00000490689 ERVK-7P63135 1459 aa15.07■□□□□ 0
SHOX2-205ENST00000490689 WASLO00401 505 aaPredicted RBP15.07■□□□□ 0
SHOX2-205ENST00000490689 ZSWIM4Q9H7M6 989 aa15.07■□□□□ 0
SHOX2-205ENST00000490689 ANO10Q9NW15 660 aa15.07■□□□□ 0
SHOX2-205ENST00000490689 RBM8AQ9Y5S9 174 aaKnown RBP15.07■□□□□ 0
SHOX2-205ENST00000490689 ABCC10Q5T3U5 1492 aa15.07■□□□□ 0
SHOX2-205ENST00000490689 SNW1Q13573 536 aaKnown RBP15.06■□□□□ 0
SHOX2-205ENST00000490689 EIF4A2Q14240 407 aaKnown RBP15.06■□□□□ 0
SHOX2-205ENST00000490689 TAF3Q5VWG9 929 aa15.06■□□□□ 0
SHOX2-205ENST00000490689 CCAR1Q8IX12 1150 aaKnown RBP15.06■□□□□ 0
SHOX2-205ENST00000490689 PA2G4Q9UQ80 394 aaKnown RBP15.06■□□□□ 0
SHOX2-205ENST00000490689 ADGBQ8N7X0 1667 aa15.06■□□□□ 0
SHOX2-205ENST00000490689 VGLL3A8MV65 326 aa15.06■□□□□ 0
SHOX2-205ENST00000490689 TPM1P09493 284 aa15.06■□□□□ 0
SHOX2-205ENST00000490689 HSP90AA4PQ58FG1 418 aa15.06■□□□□ 0
SHOX2-205ENST00000490689 NOL10Q9BSC4 688 aaKnown RBP15.06■□□□□ 0
SHOX2-205ENST00000490689 CFAP65Q6ZU64 1925 aaKnown RBP15.06■□□□□ 0
SHOX2-205ENST00000490689 ZNF530Q6P9A1 599 aaPredicted RBP15.06■□□□□ 0
SHOX2-205ENST00000490689 RAB11FIP4Q86YS3 637 aa15.06■□□□□ 0
SHOX2-205ENST00000490689 PLCH2O75038 1416 aa15.05■□□□□ 0
SHOX2-205ENST00000490689 ABCC4O15439 1325 aa15.05■□□□□ 0
SHOX2-205ENST00000490689 DNAAF4Q8WXU2 420 aa15.05■□□□□ -0
SHOX2-205ENST00000490689 CEP170Q5SW79 1584 aa15.05■□□□□ -0
SHOX2-205ENST00000490689 TTC5Q8N0Z6 440 aa15.05■□□□□ -0
SHOX2-205ENST00000490689 GTF3C6Q969F1 213 aa15.05■□□□□ -0
SHOX2-205ENST00000490689 SNX14Q9Y5W7 946 aa15.05■□□□□ -0
SHOX2-205ENST00000490689 CHMP4CQ96CF2 233 aa15.04■□□□□ -0
SHOX2-205ENST00000490689 PRDM15P57071 1507 aaPredicted RBP15.04■□□□□ -0
SHOX2-205ENST00000490689 ZDHHC9Q9Y397 364 aa15.04■□□□□ -0
SHOX2-205ENST00000490689 SMTNL1A8MU46 457 aa15.04■□□□□ -0
SHOX2-205ENST00000490689 POLR3DP05423 398 aaPredicted RBP15.04■□□□□ -0
SHOX2-205ENST00000490689 BRF1Q92994 677 aa15.04■□□□□ -0
SHOX2-205ENST00000490689 OGFRQ9NZT2 677 aa15.04■□□□□ -0
SHOX2-205ENST00000490689 CWC15Q9P013 229 aaKnown RBP15.04■□□□□ -0
SHOX2-205ENST00000490689 USP16Q9Y5T5 823 aa15.04■□□□□ -0
SHOX2-205ENST00000490689 TSR1Q2NL82 804 aaKnown RBP15.03■□□□□ -0
SHOX2-205ENST00000490689 UNC5CLQ8IV45 518 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 CALCOCO1Q9P1Z2 691 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 EIF4G3O43432 1585 aaKnown RBP15.03■□□□□ -0
SHOX2-205ENST00000490689 CCDC69A6NI79 296 aa15.03■□□□□ -0
SHOX2-205ENST00000490689 LEKR1Q6ZMV7 388 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms