RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 GNPATO15228 680 aa17.21■□□□□ 0.35
ARHGEF39-205ENST00000490638 TPTE2Q6XPS3 522 aa17.21■□□□□ 0.35
ARHGEF39-205ENST00000490638 WWC3Q9ULE0 1092 aa17.21■□□□□ 0.35
ARHGEF39-205ENST00000490638 ROBO2Q9HCK4 1378 aa17.21■□□□□ 0.35
ARHGEF39-205ENST00000490638 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.34
ARHGEF39-205ENST00000490638 ATP2B1P20020 1258 aa17.2■□□□□ 0.34
ARHGEF39-205ENST00000490638 CCDC152Q4G0S7 254 aa17.2■□□□□ 0.34
ARHGEF39-205ENST00000490638 ZNF790Q6PG37 636 aa17.2■□□□□ 0.34
ARHGEF39-205ENST00000490638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF39-205ENST00000490638 TSPYL6Q8N831 410 aa17.19■□□□□ 0.34
ARHGEF39-205ENST00000490638 CCDC43Q96MW1 224 aaKnown RBP17.19■□□□□ 0.34
ARHGEF39-205ENST00000490638 MAP3K12Q12852 859 aa17.19■□□□□ 0.34
ARHGEF39-205ENST00000490638 LMBR1LQ6UX01 489 aa17.19■□□□□ 0.34
ARHGEF39-205ENST00000490638 LINS1Q8NG48 757 aa17.19■□□□□ 0.34
ARHGEF39-205ENST00000490638 LGR6Q9HBX8 967 aa17.19■□□□□ 0.34
ARHGEF39-205ENST00000490638 BRMS1Q9HCU9 246 aa17.19■□□□□ 0.34
ARHGEF39-205ENST00000490638 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
ARHGEF39-205ENST00000490638 GRM8O00222 908 aa17.18■□□□□ 0.34
ARHGEF39-205ENST00000490638 L1TD1Q5T7N2 865 aaKnown RBP17.18■□□□□ 0.34
ARHGEF39-205ENST00000490638 MEIS3Q99687 375 aa17.18■□□□□ 0.34
ARHGEF39-205ENST00000490638 SNRKQ9NRH2 765 aa17.18■□□□□ 0.34
ARHGEF39-205ENST00000490638 CYP46A1Q9Y6A2 500 aa17.18■□□□□ 0.34
ARHGEF39-205ENST00000490638 PES1O00541 588 aaKnown RBP17.18■□□□□ 0.34
ARHGEF39-205ENST00000490638 BICD2Q8TD16 824 aa17.18■□□□□ 0.34
ARHGEF39-205ENST00000490638 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
ARHGEF39-205ENST00000490638 ADGBQ8N7X0 1667 aa17.17■□□□□ 0.34
ARHGEF39-205ENST00000490638 USP5P45974 858 aa17.17■□□□□ 0.34
ARHGEF39-205ENST00000490638 ANKRD18AQ8IVF6 992 aa17.17■□□□□ 0.34
ARHGEF39-205ENST00000490638 POLD1P28340 1107 aa17.17■□□□□ 0.34
ARHGEF39-205ENST00000490638 TRAPPC3LQ5T215 181 aa17.17■□□□□ 0.34
ARHGEF39-205ENST00000490638 SPATA31E1Q6ZUB1 1445 aa17.17■□□□□ 0.34
ARHGEF39-205ENST00000490638 ALDH1L1O75891 902 aa17.17■□□□□ 0.34
ARHGEF39-205ENST00000490638 VAMP4O75379 141 aa17.16■□□□□ 0.34
ARHGEF39-205ENST00000490638 BLOC1S2Q6QNY1 142 aa17.16■□□□□ 0.34
ARHGEF39-205ENST00000490638 UBAC1Q9BSL1 405 aa17.16■□□□□ 0.34
ARHGEF39-205ENST00000490638 DDX21Q9NR30 783 aaKnown RBP eCLIP17.16■□□□□ 0.34
ARHGEF39-205ENST00000490638 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF39-205ENST00000490638 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
ARHGEF39-205ENST00000490638 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
ARHGEF39-205ENST00000490638 MINDY4BA8MYZ0 360 aa17.16■□□□□ 0.34
ARHGEF39-205ENST00000490638 TPD52L1Q16890 204 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF39-205ENST00000490638 NUP133Q8WUM0 1156 aa17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 UTP14AQ9BVJ6 771 aaKnown RBP17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 STK32BQ9NY57 414 aa17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 ARAP3Q8WWN8 1544 aa17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 NUCB2P80303 420 aa17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 PRDM15P57071 1507 aaPredicted RBP17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 POLR3DP05423 398 aaPredicted RBP17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 RABEP1Q15276 862 aa17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 QTRT2Q9H974 415 aaKnown RBP17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 DDX11L8A8MPP1 907 aa17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 CRACR2BQ8N4Y2 399 aaPredicted RBP17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
ARHGEF39-205ENST00000490638 ECHDC1Q9NTX5 307 aa17.14■□□□□ 0.33
ARHGEF39-205ENST00000490638 ABCC3O15438 1527 aa17.14■□□□□ 0.33
ARHGEF39-205ENST00000490638 MCM2P49736 904 aa17.14■□□□□ 0.33
ARHGEF39-205ENST00000490638 RTN4Q9NQC3 1192 aaKnown RBP17.14■□□□□ 0.33
ARHGEF39-205ENST00000490638 KIAA0232Q92628 1395 aa17.14■□□□□ 0.33
ARHGEF39-205ENST00000490638 APBA3O96018 575 aa17.14■□□□□ 0.33
ARHGEF39-205ENST00000490638 ADCY10Q96PN6 1610 aa17.14■□□□□ 0.33
ARHGEF39-205ENST00000490638 CWF19L2Q2TBE0 894 aaKnown RBP17.13■□□□□ 0.33
ARHGEF39-205ENST00000490638 DNAJC10Q8IXB1 793 aa17.13■□□□□ 0.33
ARHGEF39-205ENST00000490638 CCDC47Q96A33 483 aaKnown RBP17.13■□□□□ 0.33
ARHGEF39-205ENST00000490638 NYXQ9GZU5 481 aa17.13■□□□□ 0.33
ARHGEF39-205ENST00000490638 TRPC5Q9UL62 973 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF39-205ENST00000490638 A1BGP04217 495 aa17.13■□□□□ 0.33
ARHGEF39-205ENST00000490638 NAPBQ9H115 298 aa17.13■□□□□ 0.33
ARHGEF39-205ENST00000490638 TRIM22Q8IYM9 498 aa17.13■□□□□ 0.33
ARHGEF39-205ENST00000490638 ARHGAP31Q2M1Z3 1444 aa17.13■□□□□ 0.33
ARHGEF39-205ENST00000490638 PDCP20941 246 aa17.12■□□□□ 0.33
ARHGEF39-205ENST00000490638 STK3Q13188 491 aa17.12■□□□□ 0.33
ARHGEF39-205ENST00000490638 SLC52A2Q9HAB3 445 aa17.12■□□□□ 0.33
ARHGEF39-205ENST00000490638 CCDC69A6NI79 296 aa17.12■□□□□ 0.33
ARHGEF39-205ENST00000490638 BECN2A8MW95 431 aa17.12■□□□□ 0.33
ARHGEF39-205ENST00000490638 IMMTQ16891 758 aaKnown RBP17.12■□□□□ 0.33
ARHGEF39-205ENST00000490638 NSFL1CQ9UNZ2 370 aaKnown RBP17.12■□□□□ 0.33
ARHGEF39-205ENST00000490638 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
ARHGEF39-205ENST00000490638 ZNF496Q96IT1 587 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF39-205ENST00000490638 PHAXQ9H814 394 aaKnown RBP17.12■□□□□ 0.33
ARHGEF39-205ENST00000490638 MKNK2Q9HBH9 465 aa17.12■□□□□ 0.33
ARHGEF39-205ENST00000490638 BAG6P46379 1132 aa17.11■□□□□ 0.33
ARHGEF39-205ENST00000490638 ARHGEF25Q86VW2 580 aa17.11■□□□□ 0.33
ARHGEF39-205ENST00000490638 PRR36Q9H6K5 1346 aa17.11■□□□□ 0.33
ARHGEF39-205ENST00000490638 LDHCP07864 332 aa17.11■□□□□ 0.33
ARHGEF39-205ENST00000490638 SLF2Q8IX21 1173 aa17.11■□□□□ 0.33
ARHGEF39-205ENST00000490638 GOLIM4O00461 696 aa17.11■□□□□ 0.33
ARHGEF39-205ENST00000490638 IRS4O14654 1257 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF39-205ENST00000490638 KIAA2012Q0VF49 1180 aa17.11■□□□□ 0.33
ARHGEF39-205ENST00000490638 JAKMIP1Q96N16 626 aaKnown RBP17.11■□□□□ 0.33
ARHGEF39-205ENST00000490638 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF39-205ENST00000490638 ZNF287Q9HBT7 754 aa17.11■□□□□ 0.33
ARHGEF39-205ENST00000490638 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
ARHGEF39-205ENST00000490638 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
ARHGEF39-205ENST00000490638 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
ARHGEF39-205ENST00000490638 KRT32Q14532 448 aa17.1■□□□□ 0.33
ARHGEF39-205ENST00000490638 ATP2B3Q16720 1220 aa17.1■□□□□ 0.33
ARHGEF39-205ENST00000490638 ANKRD1Q15327 319 aa17.1■□□□□ 0.33
ARHGEF39-205ENST00000490638 BRINP3Q76B58 766 aa17.1■□□□□ 0.33
ARHGEF39-205ENST00000490638 ZC3H12CQ9C0D7 883 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms