RNA–Protein interactions for RNA: ENST00000490033.5

C2orf88-208, Transcript of chromosome 2 open reading frame 88, human

TSL 3

Gene C2orf88, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C2orf88-208	ENST00000490033	MYO19	Q96H55	970 aa		5.01	□□□□□ -1.61
C2orf88-208	ENST00000490033	FAM161B	Q96MY7	647 aa		5.01	□□□□□ -1.61
C2orf88-208	ENST00000490033	DUSP9	Q99956	384 aa	Known RBP	5.01	□□□□□ -1.61
C2orf88-208	ENST00000490033	RAB6B	Q9NRW1	208 aa		5.01	□□□□□ -1.61
C2orf88-208	ENST00000490033	RNF19A	Q9NV58	838 aa		5.01	□□□□□ -1.61
C2orf88-208	ENST00000490033	CDK2AP1	O14519	115 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	SIAH2	O43255	324 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	IL2RA	P01589	272 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	BRD2	P25440	801 aa	Known RBP	5	□□□□□ -1.61
C2orf88-208	ENST00000490033	FAM26D	Q5JW98	314 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	POTEA	Q6S8J7	498 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	TMC4	Q7Z404	712 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	ATCAY	Q86WG3	371 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	MPND	Q8N594	471 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	TMEM87A	Q8NBN3	555 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	ALKBH8	Q96BT7	664 aa	Known RBP	5	□□□□□ -1.61
C2orf88-208	ENST00000490033	XAGE2	Q96GT9	111 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	ARHGEF10L	Q9HCE6	1279 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	MRS2	Q9HD23	443 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	WWC3	Q9ULE0	1092 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	5	□□□□□ -1.61
C2orf88-208	ENST00000490033	CHMP3	Q9Y3E7	222 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	USP3	Q9Y6I4	520 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	TLL2	Q9Y6L7	1015 aa		5	□□□□□ -1.61
C2orf88-208	ENST00000490033	SORBS3	O60504	671 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	CD2BP2	O95400	341 aa	Known RBP	4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	ADH1C	P00326	375 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	DAB2	P98082	770 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	ATP2B2	Q01814	1243 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	KCNC4	Q03721	635 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	NR5A1	Q13285	461 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	TLR1	Q15399	786 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	SF3A1	Q15459	793 aa	Known RBP	4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	CNKSR1	Q969H4	720 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	NGLY1	Q96IV0	654 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	SETDB2	Q96T68	719 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	NIF3L1	Q9GZT8	377 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	HRH3	Q9Y5N1	445 aa		4.99	□□□□□ -1.61
C2orf88-208	ENST00000490033	SERTM1	A2A2V5	107 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	EML1	O00423	815 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	NR3C2	P08235	984 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	GGCX	P38435	758 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	ITGAE	P38570	1179 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	HIRA	P54198	1017 aa	Predicted RBP	4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	RAD51AP2	Q09MP3	1159 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	PSMD2	Q13200	908 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	TEAD4	Q15561	434 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	ENOX2	Q16206	610 aa	Known RBP	4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	SH3PXD2A	Q5TCZ1	1133 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	METTL16	Q86W50	562 aa	Known RBP	4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	NT5DC4	Q86YG4	428 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	FAM177A1	Q8N128	213 aa	Predicted RBP	4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	GJD3	Q8N144	294 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	PIK3R5	Q8WYR1	880 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	UBXN4	Q92575	508 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	ESYT1	Q9BSJ8	1104 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	PGPEP1	Q9NXJ5	209 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	POLI	Q9UNA4	740 aa		4.98	□□□□□ -1.61
C2orf88-208	ENST00000490033	PNMA6F	A0A0J9YX94	578 aa		4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	MZF1	P28698	734 aa	Predicted RBP	4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	NOS2	P35228	1153 aa		4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	DNM1	Q05193	864 aa	Known RBP	4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	C11orf91	Q3C1V1	193 aa		4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	ETFBKMT	Q8IXQ9	262 aa		4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	ALDH16A1	Q8IZ83	802 aa		4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	NBPF15	Q8N660	670 aa		4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	ZDHHC1	Q8WTX9	485 aa		4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	PUS7	Q96PZ0	661 aa	Known RBP	4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	METTL5	Q9NRN9	209 aa	Known RBP	4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	VTI1B	Q9UEU0	232 aa		4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	ZNF232	Q9UNY5	417 aa		4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	HCN4	Q9Y3Q4	1203 aa		4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	EMILIN1	Q9Y6C2	1016 aa		4.97	□□□□□ -1.61
C2orf88-208	ENST00000490033	ITGBL1	O95965	494 aa	Predicted RBP	4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	PDGFA	P04085	211 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	HMGB1	P09429	215 aa	Known RBP	4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	USP5	P45974	858 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	FANCC	Q00597	558 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	CLN3	Q13286	438 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	DGKZ	Q13574	1117 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	RTN1	Q16799	776 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	ALG1L	Q6GMV1	187 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	PPP1R18	Q6NYC8	613 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	ZNF295-AS1	Q8N0V1	137 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	KDF1	Q8NAX2	398 aa	Predicted RBP	4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	EDEM1	Q92611	657 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	RNF34	Q969K3	372 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	L3MBTL2	Q969R5	705 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	IFT43	Q96FT9	208 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	FHDC1	Q9C0D6	1143 aa	Predicted RBP	4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	CABP1	Q9NZU7	370 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	KLK14	Q9P0G3	267 aa		4.96	□□□□□ -1.62
C2orf88-208	ENST00000490033	ADH1A	P07327	375 aa		4.95	□□□□□ -1.62
C2orf88-208	ENST00000490033	ZAP70	P43403	619 aa		4.95	□□□□□ -1.62
C2orf88-208	ENST00000490033	CENPC	Q03188	943 aa		4.95	□□□□□ -1.62
C2orf88-208	ENST00000490033	LIAT1	Q6ZQX7	453 aa		4.95	□□□□□ -1.62
C2orf88-208	ENST00000490033	TGIF2	Q9GZN2	237 aa		4.95	□□□□□ -1.62
C2orf88-208	ENST00000490033	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.95	□□□□□ -1.62
C2orf88-208	ENST00000490033	PARP3	Q9Y6F1	533 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms