RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ZNF790Q6PG37 636 aa26.06■■□□□ 1.76
TNFRSF1B-202ENST00000489921 ZNF496Q96IT1 587 aaPredicted RBP26.06■■□□□ 1.76
TNFRSF1B-202ENST00000489921 AFDNP55196 1824 aaKnown RBP26.06■■□□□ 1.76
TNFRSF1B-202ENST00000489921 COL15A1P39059 1388 aa26.06■■□□□ 1.76
TNFRSF1B-202ENST00000489921 GIGYF1O75420 1035 aaPredicted RBP26.05■■□□□ 1.76
TNFRSF1B-202ENST00000489921 BCL2L12Q9HB09 334 aa26.05■■□□□ 1.76
TNFRSF1B-202ENST00000489921 NARFQ9UHQ1 456 aa26.05■■□□□ 1.76
TNFRSF1B-202ENST00000489921 ZPR1O75312 459 aa26.04■■□□□ 1.76
TNFRSF1B-202ENST00000489921 TEFQ10587 303 aa26.04■■□□□ 1.76
TNFRSF1B-202ENST00000489921 CEP350Q5VT06 3117 aa26.03■■□□□ 1.76
TNFRSF1B-202ENST00000489921 NRXN2Q9P2S2 1712 aa26.03■■□□□ 1.76
TNFRSF1B-202ENST00000489921 ARFGEF1Q9Y6D6 1849 aa26.03■■□□□ 1.76
TNFRSF1B-202ENST00000489921 BCS1LQ9Y276 419 aa26.03■■□□□ 1.76
TNFRSF1B-202ENST00000489921 HEG1Q9ULI3 1381 aa26.03■■□□□ 1.76
TNFRSF1B-202ENST00000489921 TTC5Q8N0Z6 440 aa26.02■■□□□ 1.76
TNFRSF1B-202ENST00000489921 KCNQ3O43525 872 aa26.01■■□□□ 1.75
TNFRSF1B-202ENST00000489921 U2AF1L5P0DN76 240 aaPredicted RBP26.01■■□□□ 1.75
TNFRSF1B-202ENST00000489921 EIF5P55010 431 aaKnown RBP26.01■■□□□ 1.75
TNFRSF1B-202ENST00000489921 U2AF1Q01081 240 aaKnown RBP eCLIP26.01■■□□□ 1.75
TNFRSF1B-202ENST00000489921 NUDCQ9Y266 331 aa26.01■■□□□ 1.75
TNFRSF1B-202ENST00000489921 FCHSD2O94868 740 aa26■■□□□ 1.75
TNFRSF1B-202ENST00000489921 CANXP27824 592 aaKnown RBP26■■□□□ 1.75
TNFRSF1B-202ENST00000489921 NFIXQ14938 502 aa26■■□□□ 1.75
TNFRSF1B-202ENST00000489921 STARD3NLO95772 234 aa25.99■■□□□ 1.75
TNFRSF1B-202ENST00000489921 CHRNA5P30532 468 aa25.97■■□□□ 1.75
TNFRSF1B-202ENST00000489921 TEX13AQ9BXU3 409 aaPredicted RBP25.96■■□□□ 1.75
TNFRSF1B-202ENST00000489921 GPBP1L1Q9HC44 474 aaPredicted RBP25.96■■□□□ 1.75
TNFRSF1B-202ENST00000489921 PIM2Q9P1W9 311 aa25.96■■□□□ 1.75
TNFRSF1B-202ENST00000489921 BTBD11A6QL63 1104 aa25.95■■□□□ 1.74
TNFRSF1B-202ENST00000489921 MCM10Q7L590 875 aa25.95■■□□□ 1.74
TNFRSF1B-202ENST00000489921 ZNF526Q8TF50 670 aaPredicted RBP25.95■■□□□ 1.74
TNFRSF1B-202ENST00000489921 FMNL2Q96PY5 1086 aa25.95■■□□□ 1.74
TNFRSF1B-202ENST00000489921 SENP3-EIF4A1A0A087X0R7 540 aa25.94■■□□□ 1.74
TNFRSF1B-202ENST00000489921 ARHGAP27Q6ZUM4 889 aa25.94■■□□□ 1.74
TNFRSF1B-202ENST00000489921 SCN7AQ01118 1682 aa25.93■■□□□ 1.74
TNFRSF1B-202ENST00000489921 A1BGP04217 495 aa25.93■■□□□ 1.74
TNFRSF1B-202ENST00000489921 DCTN1Q14203 1278 aa25.93■■□□□ 1.74
TNFRSF1B-202ENST00000489921 DLG5Q8TDM6 1919 aa25.92■■□□□ 1.74
TNFRSF1B-202ENST00000489921 SERPINB2P05120 415 aa25.92■■□□□ 1.74
TNFRSF1B-202ENST00000489921 DLEC1Q9Y238 1755 aa25.92■■□□□ 1.74
TNFRSF1B-202ENST00000489921 PRAMEF22A3QJZ6 481 aa25.91■■□□□ 1.74
TNFRSF1B-202ENST00000489921 IL6STP40189 918 aaPredicted RBP25.91■■□□□ 1.74
TNFRSF1B-202ENST00000489921 DALRD3Q5D0E6 543 aaKnown RBP25.91■■□□□ 1.74
TNFRSF1B-202ENST00000489921 USP16Q9Y5T5 823 aa25.91■■□□□ 1.74
TNFRSF1B-202ENST00000489921 A0A087WZG4 1122 aa25.9■■□□□ 1.74
TNFRSF1B-202ENST00000489921 TBC1D2BQ9UPU7 963 aa25.9■■□□□ 1.74
TNFRSF1B-202ENST00000489921 SBF1O95248 1867 aa25.89■■□□□ 1.74
TNFRSF1B-202ENST00000489921 HTATSF1O43719 755 aaKnown RBP25.89■■□□□ 1.74
TNFRSF1B-202ENST00000489921 TBC1D9BQ66K14 1250 aa25.89■■□□□ 1.74
TNFRSF1B-202ENST00000489921 CARMIL3Q8ND23 1372 aa25.89■■□□□ 1.74
TNFRSF1B-202ENST00000489921 ANKRD31Q8N7Z5 1873 aa25.89■■□□□ 1.73
TNFRSF1B-202ENST00000489921 KIF3CO14782 793 aa25.88■■□□□ 1.73
TNFRSF1B-202ENST00000489921 RTF1Q92541 710 aaKnown RBP25.88■■□□□ 1.73
TNFRSF1B-202ENST00000489921 PLEKHF1Q96S99 279 aa25.88■■□□□ 1.73
TNFRSF1B-202ENST00000489921 BCORQ6W2J9 1755 aa25.87■■□□□ 1.73
TNFRSF1B-202ENST00000489921 BICDL1Q6ZP65 573 aa25.87■■□□□ 1.73
TNFRSF1B-202ENST00000489921 CAMTA2O94983 1202 aa25.86■■□□□ 1.73
TNFRSF1B-202ENST00000489921 PIP4K2AP48426 406 aaPredicted RBP25.85■■□□□ 1.73
TNFRSF1B-202ENST00000489921 C9orf131Q5VYM1 1079 aa25.84■■□□□ 1.73
TNFRSF1B-202ENST00000489921 ZNF330Q9Y3S2 320 aaPredicted RBP25.84■■□□□ 1.73
TNFRSF1B-202ENST00000489921 SNRPA1P09661 255 aaKnown RBP25.83■■□□□ 1.73
TNFRSF1B-202ENST00000489921 TAF7Q15545 349 aaPredicted RBP25.82■■□□□ 1.72
TNFRSF1B-202ENST00000489921 MIS18AQ9NYP9 233 aa25.82■■□□□ 1.72
TNFRSF1B-202ENST00000489921 KDM3BQ7LBC6 1761 aa25.82■■□□□ 1.72
TNFRSF1B-202ENST00000489921 NBPF26B4DH59 902 aa25.8■■□□□ 1.72
TNFRSF1B-202ENST00000489921 PRR5LQ6MZQ0 368 aa25.8■■□□□ 1.72
TNFRSF1B-202ENST00000489921 NBPF10Q6P3W6 841 aaKnown RBP25.8■■□□□ 1.72
TNFRSF1B-202ENST00000489921 C2CD5Q86YS7 1000 aa25.8■■□□□ 1.72
TNFRSF1B-202ENST00000489921 NBPF15Q8N660 670 aa25.8■■□□□ 1.72
TNFRSF1B-202ENST00000489921 COL11A2P13942 1736 aaPredicted RBP25.8■■□□□ 1.72
TNFRSF1B-202ENST00000489921 DZIP3Q86Y13 1208 aaKnown RBP25.79■■□□□ 1.72
TNFRSF1B-202ENST00000489921 CCDC24Q8N4L8 307 aa25.79■■□□□ 1.72
TNFRSF1B-202ENST00000489921 PRELPP51888 382 aa25.78■■□□□ 1.72
TNFRSF1B-202ENST00000489921 TTLL6Q8N841 843 aa25.78■■□□□ 1.72
TNFRSF1B-202ENST00000489921 BRIP1Q9BX63 1249 aa25.78■■□□□ 1.72
TNFRSF1B-202ENST00000489921 LAMB4A4D0S4 1761 aa25.77■■□□□ 1.72
TNFRSF1B-202ENST00000489921 H0YIN7 160 aa25.77■■□□□ 1.72
TNFRSF1B-202ENST00000489921 NMRK2Q9NPI5 230 aa25.77■■□□□ 1.72
TNFRSF1B-202ENST00000489921 RASSF7Q02833 373 aa25.76■■□□□ 1.71
TNFRSF1B-202ENST00000489921 NFE2L2Q16236 605 aa25.76■■□□□ 1.71
TNFRSF1B-202ENST00000489921 SETDB2Q96T68 719 aa25.76■■□□□ 1.71
TNFRSF1B-202ENST00000489921 RNF181Q9P0P0 153 aa25.76■■□□□ 1.71
TNFRSF1B-202ENST00000489921 CCDC88AQ3V6T2 1871 aa25.76■■□□□ 1.71
TNFRSF1B-202ENST00000489921 THUMPD2Q9BTF0 503 aaKnown RBP25.75■■□□□ 1.71
TNFRSF1B-202ENST00000489921 CLEC4GQ6UXB4 293 aa25.74■■□□□ 1.71
TNFRSF1B-202ENST00000489921 HSPA6P17066 643 aa25.73■■□□□ 1.71
TNFRSF1B-202ENST00000489921 RALBP1Q15311 655 aa25.73■■□□□ 1.71
TNFRSF1B-202ENST00000489921 NPM2Q86SE8 214 aaKnown RBP25.73■■□□□ 1.71
TNFRSF1B-202ENST00000489921 PDE6BP35913 854 aa25.72■■□□□ 1.71
TNFRSF1B-202ENST00000489921 NEFMP07197 916 aa25.71■■□□□ 1.71
TNFRSF1B-202ENST00000489921 EIF4A1P60842 406 aaKnown RBP25.71■■□□□ 1.71
TNFRSF1B-202ENST00000489921 DDX10Q13206 875 aaKnown RBP25.71■■□□□ 1.71
TNFRSF1B-202ENST00000489921 CNBD1Q8NA66 436 aa25.71■■□□□ 1.71
TNFRSF1B-202ENST00000489921 PDZRN3Q9UPQ7 1066 aa25.71■■□□□ 1.71
TNFRSF1B-202ENST00000489921 FER1L6Q2WGJ9 1857 aa25.7■■□□□ 1.71
TNFRSF1B-202ENST00000489921 NFKBIEO00221 500 aa25.7■■□□□ 1.7
TNFRSF1B-202ENST00000489921 TOMM70O94826 608 aa25.7■■□□□ 1.7
TNFRSF1B-202ENST00000489921 PNISRQ8TF01 805 aaKnown RBP25.7■■□□□ 1.7
TNFRSF1B-202ENST00000489921 SLX4Q8IY92 1834 aa25.7■■□□□ 1.7
TNFRSF1B-202ENST00000489921 CACNA1SQ13698 1873 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms