RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 HDAC1Q13547 482 aaPredicted RBP22.82■■□□□ 1.24
CD40-206ENST00000489304 A0A0G2JS52 829 aa22.81■■□□□ 1.24
CD40-206ENST00000489304 PRIM1P49642 420 aaKnown RBP22.81■■□□□ 1.24
CD40-206ENST00000489304 MYT1Q01538 1121 aa22.81■■□□□ 1.24
CD40-206ENST00000489304 PROSER3Q2NL68 480 aa22.81■■□□□ 1.24
CD40-206ENST00000489304 ACSBG1Q96GR2 724 aa22.81■■□□□ 1.24
CD40-206ENST00000489304 ASAP1Q9ULH1 1129 aa22.81■■□□□ 1.24
CD40-206ENST00000489304 USP16Q9Y5T5 823 aa22.81■■□□□ 1.24
CD40-206ENST00000489304 UBR2Q8IWV8 1755 aa22.81■■□□□ 1.24
CD40-206ENST00000489304 KCPQ6ZWJ8 1503 aa22.8■■□□□ 1.24
CD40-206ENST00000489304 PTCD1O75127 700 aaKnown RBP22.79■■□□□ 1.24
CD40-206ENST00000489304 SYTL4Q96C24 671 aaPredicted RBP22.79■■□□□ 1.24
CD40-206ENST00000489304 ATG3Q9NT62 314 aa22.79■■□□□ 1.24
CD40-206ENST00000489304 TRPC5Q9UL62 973 aaPredicted RBP22.79■■□□□ 1.24
CD40-206ENST00000489304 PXDNLA1KZ92 1463 aa22.79■■□□□ 1.24
CD40-206ENST00000489304 F6X3S4 739 aa22.79■■□□□ 1.24
CD40-206ENST00000489304 SNRPA1P09661 255 aaKnown RBP22.79■■□□□ 1.24
CD40-206ENST00000489304 CCT4P50991 539 aaKnown RBP22.79■■□□□ 1.24
CD40-206ENST00000489304 FKBP5Q13451 457 aaPredicted RBP22.79■■□□□ 1.24
CD40-206ENST00000489304 BCL9O00512 1426 aa22.78■■□□□ 1.24
CD40-206ENST00000489304 ITGB4P16144 1822 aa22.78■■□□□ 1.24
CD40-206ENST00000489304 QTRT2Q9H974 415 aaKnown RBP22.78■■□□□ 1.24
CD40-206ENST00000489304 DBF4Q9UBU7 674 aaPredicted RBP22.78■■□□□ 1.24
CD40-206ENST00000489304 DOT1LQ8TEK3 1739 aa22.78■■□□□ 1.24
CD40-206ENST00000489304 PDIA6Q15084 440 aa22.77■■□□□ 1.24
CD40-206ENST00000489304 LAMB4A4D0S4 1761 aa22.77■■□□□ 1.24
CD40-206ENST00000489304 THSD7AQ9UPZ6 1657 aa22.77■■□□□ 1.24
CD40-206ENST00000489304 PIP4K2AP48426 406 aaPredicted RBP22.75■■□□□ 1.23
CD40-206ENST00000489304 SLC4A10Q6U841 1118 aa22.74■■□□□ 1.23
CD40-206ENST00000489304 KCNQ2O43526 872 aa22.73■■□□□ 1.23
CD40-206ENST00000489304 FAM182BQ5T319 152 aa22.73■■□□□ 1.23
CD40-206ENST00000489304 SKAP1Q86WV1 359 aa22.73■■□□□ 1.23
CD40-206ENST00000489304 DDX21Q9NR30 783 aaKnown RBP eCLIP22.73■■□□□ 1.23
CD40-206ENST00000489304 HYPKQ9NX55 129 aa22.73■■□□□ 1.23
CD40-206ENST00000489304 ONECUT3O60422 494 aaPredicted RBP22.72■■□□□ 1.23
CD40-206ENST00000489304 MYL6BP14649 208 aa22.72■■□□□ 1.23
CD40-206ENST00000489304 RBM42Q9BTD8 480 aaKnown RBP22.72■■□□□ 1.23
CD40-206ENST00000489304 SEPT12Q8IYM1 358 aa22.71■■□□□ 1.23
CD40-206ENST00000489304 SMC5Q8IY18 1101 aa22.71■■□□□ 1.23
CD40-206ENST00000489304 SLC4A9Q96Q91 983 aa22.71■■□□□ 1.23
CD40-206ENST00000489304 C1orf115Q9H7X2 142 aa22.71■■□□□ 1.23
CD40-206ENST00000489304 FBXO41Q8TF61 875 aa22.7■■□□□ 1.22
CD40-206ENST00000489304 LRP10Q7Z4F1 713 aa22.69■■□□□ 1.22
CD40-206ENST00000489304 DNAJC10Q8IXB1 793 aa22.69■■□□□ 1.22
CD40-206ENST00000489304 MEIS3Q99687 375 aa22.69■■□□□ 1.22
CD40-206ENST00000489304 A1BGP04217 495 aa22.68■■□□□ 1.22
CD40-206ENST00000489304 AIMP1Q12904 312 aaKnown RBP22.68■■□□□ 1.22
CD40-206ENST00000489304 PTF1AQ7RTS3 328 aa22.68■■□□□ 1.22
CD40-206ENST00000489304 SIRT2Q8IXJ6 389 aa22.68■■□□□ 1.22
CD40-206ENST00000489304 ATP10DQ9P241 1426 aa22.68■■□□□ 1.22
CD40-206ENST00000489304 ADCY9O60503 1353 aa22.68■■□□□ 1.22
CD40-206ENST00000489304 PI4KAP2A4QPH2 592 aa22.68■■□□□ 1.22
CD40-206ENST00000489304 NBPF26B4DH59 902 aa22.68■■□□□ 1.22
CD40-206ENST00000489304 NBPF14Q5TI25 921 aa22.68■■□□□ 1.22
CD40-206ENST00000489304 NBPF10Q6P3W6 841 aaKnown RBP22.68■■□□□ 1.22
CD40-206ENST00000489304 NBPF15Q8N660 670 aa22.68■■□□□ 1.22
CD40-206ENST00000489304 PI4KAP1Q8N8J0 262 aa22.68■■□□□ 1.22
CD40-206ENST00000489304 PDZRN3Q9UPQ7 1066 aa22.68■■□□□ 1.22
CD40-206ENST00000489304 XAGE3Q8WTP9 111 aa22.67■■□□□ 1.22
CD40-206ENST00000489304 DNAAF4Q8WXU2 420 aa22.67■■□□□ 1.22
CD40-206ENST00000489304 RPAP2Q8IXW5 612 aaPredicted RBP22.66■■□□□ 1.22
CD40-206ENST00000489304 ANKRD44Q8N8A2 993 aa22.66■■□□□ 1.22
CD40-206ENST00000489304 KAT6BQ8WYB5 2073 aa22.66■■□□□ 1.22
CD40-206ENST00000489304 GNAI3P08754 354 aa22.65■■□□□ 1.22
CD40-206ENST00000489304 KSR2Q6VAB6 950 aa22.65■■□□□ 1.22
CD40-206ENST00000489304 COPS6Q7L5N1 327 aa22.65■■□□□ 1.22
CD40-206ENST00000489304 VSIG10Q8N0Z9 540 aa22.65■■□□□ 1.22
CD40-206ENST00000489304 ERBB4Q15303 1308 aa22.65■■□□□ 1.22
CD40-206ENST00000489304 RGS3P49796 1198 aa22.64■■□□□ 1.21
CD40-206ENST00000489304 GCC1Q96CN9 775 aa22.64■■□□□ 1.21
CD40-206ENST00000489304 SRCIN1Q9C0H9 1055 aa22.64■■□□□ 1.21
CD40-206ENST00000489304 DDX58O95786 925 aaKnown RBP22.63■■□□□ 1.21
CD40-206ENST00000489304 BEND3Q5T5X7 828 aa22.63■■□□□ 1.21
CD40-206ENST00000489304 CEP85Q6P2H3 762 aa22.63■■□□□ 1.21
CD40-206ENST00000489304 MAP3K2Q9Y2U5 619 aa22.63■■□□□ 1.21
CD40-206ENST00000489304 GNAI2P04899 355 aa22.62■■□□□ 1.21
CD40-206ENST00000489304 ZNF772Q68DY9 489 aaPredicted RBP22.62■■□□□ 1.21
CD40-206ENST00000489304 USP44Q9H0E7 712 aa22.62■■□□□ 1.21
CD40-206ENST00000489304 RBM19Q9Y4C8 960 aaKnown RBP22.62■■□□□ 1.21
CD40-206ENST00000489304 PALLDQ8WX93 1383 aa22.6■■□□□ 1.21
CD40-206ENST00000489304 ALDH1L1O75891 902 aa22.6■■□□□ 1.21
CD40-206ENST00000489304 CYP19A1P11511 503 aaPredicted RBP22.6■■□□□ 1.21
CD40-206ENST00000489304 NUCB1Q02818 461 aa22.6■■□□□ 1.21
CD40-206ENST00000489304 TEX13AQ9BXU3 409 aaPredicted RBP22.6■■□□□ 1.21
CD40-206ENST00000489304 TTLL7Q6ZT98 887 aa22.59■■□□□ 1.21
CD40-206ENST00000489304 IBTKQ9P2D0 1353 aaPredicted RBP22.58■■□□□ 1.21
CD40-206ENST00000489304 RIC3Q7Z5B4 369 aa22.58■■□□□ 1.21
CD40-206ENST00000489304 DCTPP1Q9H773 170 aa22.58■■□□□ 1.21
CD40-206ENST00000489304 TJP1Q07157 1748 aa22.58■■□□□ 1.21
CD40-206ENST00000489304 ARFGEF2Q9Y6D5 1785 aa22.57■■□□□ 1.2
CD40-206ENST00000489304 LOC102724428A0A0B4J2F2 783 aa22.57■■□□□ 1.2
CD40-206ENST00000489304 PDE4AP27815 886 aa22.57■■□□□ 1.2
CD40-206ENST00000489304 SIK1P57059 783 aa22.57■■□□□ 1.2
CD40-206ENST00000489304 RBM6P78332 1123 aaKnown RBP22.57■■□□□ 1.2
CD40-206ENST00000489304 ITPK1Q13572 414 aa22.57■■□□□ 1.2
CD40-206ENST00000489304 STARD3NLO95772 234 aa22.57■■□□□ 1.2
CD40-206ENST00000489304 ANKRD13DQ6ZTN6 518 aa22.57■■□□□ 1.2
CD40-206ENST00000489304 BACH2Q9BYV9 841 aa22.57■■□□□ 1.2
CD40-206ENST00000489304 RGS17Q9UGC6 210 aaPredicted RBP22.57■■□□□ 1.2
CD40-206ENST00000489304 HMMRO75330 724 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms