RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 DLG5Q8TDM6 1919 aa18.82■□□□□ 0.6
PLS3-207ENST00000489283 CEMIPQ8WUJ3 1361 aa18.82■□□□□ 0.6
PLS3-207ENST00000489283 A0A0G2JLW4 131 aa18.82■□□□□ 0.6
PLS3-207ENST00000489283 USPL1Q5W0Q7 1092 aa18.82■□□□□ 0.6
PLS3-207ENST00000489283 NUDCQ9Y266 331 aa18.82■□□□□ 0.6
PLS3-207ENST00000489283 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
PLS3-207ENST00000489283 DLEC1Q9Y238 1755 aa18.81■□□□□ 0.6
PLS3-207ENST00000489283 ZPR1O75312 459 aa18.81■□□□□ 0.6
PLS3-207ENST00000489283 DPEP1P16444 411 aa18.81■□□□□ 0.6
PLS3-207ENST00000489283 C1QTNF8P60827 252 aa18.81■□□□□ 0.6
PLS3-207ENST00000489283 U2AF1L5P0DN76 240 aaPredicted RBP18.8■□□□□ 0.6
PLS3-207ENST00000489283 U2AF1Q01081 240 aaKnown RBP eCLIP18.8■□□□□ 0.6
PLS3-207ENST00000489283 ZNF790Q6PG37 636 aa18.8■□□□□ 0.6
PLS3-207ENST00000489283 ZNF496Q96IT1 587 aaPredicted RBP18.8■□□□□ 0.6
PLS3-207ENST00000489283 BCS1LQ9Y276 419 aa18.8■□□□□ 0.6
PLS3-207ENST00000489283 BCORQ6W2J9 1755 aa18.79■□□□□ 0.6
PLS3-207ENST00000489283 POLRMTO00411 1230 aaKnown RBP18.79■□□□□ 0.6
PLS3-207ENST00000489283 NARFQ9UHQ1 456 aa18.79■□□□□ 0.6
PLS3-207ENST00000489283 CANXP27824 592 aaKnown RBP18.78■□□□□ 0.6
PLS3-207ENST00000489283 TM4SF1P30408 202 aa18.78■□□□□ 0.6
PLS3-207ENST00000489283 STARD3NLO95772 234 aa18.77■□□□□ 0.6
PLS3-207ENST00000489283 FCHSD2O94868 740 aa18.76■□□□□ 0.59
PLS3-207ENST00000489283 KCNA3P22001 575 aa18.76■□□□□ 0.59
PLS3-207ENST00000489283 ZNF526Q8TF50 670 aaPredicted RBP18.76■□□□□ 0.59
PLS3-207ENST00000489283 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
PLS3-207ENST00000489283 BCL2L12Q9HB09 334 aa18.76■□□□□ 0.59
PLS3-207ENST00000489283 LAMB4A4D0S4 1761 aa18.76■□□□□ 0.59
PLS3-207ENST00000489283 BTBD11A6QL63 1104 aa18.75■□□□□ 0.59
PLS3-207ENST00000489283 EIF5P55010 431 aaKnown RBP18.75■□□□□ 0.59
PLS3-207ENST00000489283 NFIXQ14938 502 aa18.75■□□□□ 0.59
PLS3-207ENST00000489283 GPBP1L1Q9HC44 474 aaPredicted RBP18.75■□□□□ 0.59
PLS3-207ENST00000489283 ANKRD31Q8N7Z5 1873 aa18.75■□□□□ 0.59
PLS3-207ENST00000489283 KDM3BQ7LBC6 1761 aa18.74■□□□□ 0.59
PLS3-207ENST00000489283 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
PLS3-207ENST00000489283 KCNQ3O43525 872 aa18.74■□□□□ 0.59
PLS3-207ENST00000489283 MCM10Q7L590 875 aa18.74■□□□□ 0.59
PLS3-207ENST00000489283 TEX13AQ9BXU3 409 aaPredicted RBP18.74■□□□□ 0.59
PLS3-207ENST00000489283 CHRNA5P30532 468 aa18.73■□□□□ 0.59
PLS3-207ENST00000489283 RTF1Q92541 710 aaKnown RBP18.73■□□□□ 0.59
PLS3-207ENST00000489283 PIM2Q9P1W9 311 aa18.73■□□□□ 0.59
PLS3-207ENST00000489283 SBF1O95248 1867 aa18.73■□□□□ 0.59
PLS3-207ENST00000489283 COL11A2P13942 1736 aaPredicted RBP18.72■□□□□ 0.59
PLS3-207ENST00000489283 A0A087WZG4 1122 aa18.72■□□□□ 0.59
PLS3-207ENST00000489283 ARHGAP27Q6ZUM4 889 aa18.72■□□□□ 0.59
PLS3-207ENST00000489283 ZNF330Q9Y3S2 320 aaPredicted RBP18.72■□□□□ 0.59
PLS3-207ENST00000489283 CARMIL3Q8ND23 1372 aa18.71■□□□□ 0.59
PLS3-207ENST00000489283 DCTN1Q14203 1278 aa18.71■□□□□ 0.59
PLS3-207ENST00000489283 A1BGP04217 495 aa18.7■□□□□ 0.58
PLS3-207ENST00000489283 SERPINB2P05120 415 aa18.7■□□□□ 0.58
PLS3-207ENST00000489283 IL6STP40189 918 aaPredicted RBP18.7■□□□□ 0.58
PLS3-207ENST00000489283 DALRD3Q5D0E6 543 aaKnown RBP18.7■□□□□ 0.58
PLS3-207ENST00000489283 CACNA1SQ13698 1873 aa18.69■□□□□ 0.58
PLS3-207ENST00000489283 BICDL1Q6ZP65 573 aa18.69■□□□□ 0.58
PLS3-207ENST00000489283 PRAMEF22A3QJZ6 481 aa18.68■□□□□ 0.58
PLS3-207ENST00000489283 HTATSF1O43719 755 aaKnown RBP18.68■□□□□ 0.58
PLS3-207ENST00000489283 TBC1D9BQ66K14 1250 aa18.68■□□□□ 0.58
PLS3-207ENST00000489283 TBC1D2BQ9UPU7 963 aa18.68■□□□□ 0.58
PLS3-207ENST00000489283 USP16Q9Y5T5 823 aa18.67■□□□□ 0.58
PLS3-207ENST00000489283 NEFMP07197 916 aa18.66■□□□□ 0.58
PLS3-207ENST00000489283 PIP4K2AP48426 406 aaPredicted RBP18.66■□□□□ 0.58
PLS3-207ENST00000489283 CCDC88AQ3V6T2 1871 aa18.66■□□□□ 0.58
PLS3-207ENST00000489283 TIAM2Q8IVF5 1701 aa18.66■□□□□ 0.58
PLS3-207ENST00000489283 CAMTA2O94983 1202 aa18.65■□□□□ 0.58
PLS3-207ENST00000489283 SNRPA1P09661 255 aaKnown RBP18.65■□□□□ 0.58
PLS3-207ENST00000489283 NPM2Q86SE8 214 aaKnown RBP18.65■□□□□ 0.58
PLS3-207ENST00000489283 PLEKHF1Q96S99 279 aa18.65■□□□□ 0.58
PLS3-207ENST00000489283 ARFGEF2Q9Y6D5 1785 aa18.65■□□□□ 0.58
PLS3-207ENST00000489283 C9orf131Q5VYM1 1079 aa18.64■□□□□ 0.57
PLS3-207ENST00000489283 C2CD5Q86YS7 1000 aa18.64■□□□□ 0.57
PLS3-207ENST00000489283 KIF3CO14782 793 aa18.63■□□□□ 0.57
PLS3-207ENST00000489283 TAF7Q15545 349 aaPredicted RBP18.63■□□□□ 0.57
PLS3-207ENST00000489283 DZIP3Q86Y13 1208 aaKnown RBP18.63■□□□□ 0.57
PLS3-207ENST00000489283 TNRC6CQ9HCJ0 1690 aaKnown RBP18.63■□□□□ 0.57
PLS3-207ENST00000489283 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
PLS3-207ENST00000489283 PRR5LQ6MZQ0 368 aa18.62■□□□□ 0.57
PLS3-207ENST00000489283 MIS18AQ9NYP9 233 aa18.62■□□□□ 0.57
PLS3-207ENST00000489283 MAPK8IP3Q9UPT6 1336 aa18.62■□□□□ 0.57
PLS3-207ENST00000489283 H0YIN7 160 aa18.61■□□□□ 0.57
PLS3-207ENST00000489283 CCDC24Q8N4L8 307 aa18.61■□□□□ 0.57
PLS3-207ENST00000489283 RNF181Q9P0P0 153 aa18.61■□□□□ 0.57
PLS3-207ENST00000489283 FER1L6Q2WGJ9 1857 aa18.6■□□□□ 0.57
PLS3-207ENST00000489283 RASSF7Q02833 373 aa18.6■□□□□ 0.57
PLS3-207ENST00000489283 RALBP1Q15311 655 aa18.6■□□□□ 0.57
PLS3-207ENST00000489283 TTLL6Q8N841 843 aa18.6■□□□□ 0.57
PLS3-207ENST00000489283 SETDB2Q96T68 719 aa18.6■□□□□ 0.57
PLS3-207ENST00000489283 THUMPD2Q9BTF0 503 aaKnown RBP18.6■□□□□ 0.57
PLS3-207ENST00000489283 NUP98P52948 1817 aa18.59■□□□□ 0.57
PLS3-207ENST00000489283 NBPF26B4DH59 902 aa18.59■□□□□ 0.57
PLS3-207ENST00000489283 NBPF10Q6P3W6 841 aaKnown RBP18.59■□□□□ 0.57
PLS3-207ENST00000489283 NBPF15Q8N660 670 aa18.59■□□□□ 0.57
PLS3-207ENST00000489283 CNBD1Q8NA66 436 aa18.59■□□□□ 0.57
PLS3-207ENST00000489283 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
PLS3-207ENST00000489283 DICER1Q9UPY3 1922 aaKnown RBP18.59■□□□□ 0.57
PLS3-207ENST00000489283 PDE6BP35913 854 aa18.58■□□□□ 0.56
PLS3-207ENST00000489283 DDX10Q13206 875 aaKnown RBP18.58■□□□□ 0.56
PLS3-207ENST00000489283 PNISRQ8TF01 805 aaKnown RBP18.58■□□□□ 0.56
PLS3-207ENST00000489283 BRIP1Q9BX63 1249 aa18.58■□□□□ 0.56
PLS3-207ENST00000489283 NMRK2Q9NPI5 230 aa18.58■□□□□ 0.56
PLS3-207ENST00000489283 SLX4Q8IY92 1834 aa18.58■□□□□ 0.56
PLS3-207ENST00000489283 NPHP1O15259 732 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms