RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 IQSEC3Q9UPP2 1182 aaPredicted RBP8.01□□□□□ -1.13
XRN1-213ENST00000489241 POM121CA8CG34 1229 aa8□□□□□ -1.13
XRN1-213ENST00000489241 USP17L5A8MUK1 530 aa8□□□□□ -1.13
XRN1-213ENST00000489241 CDK2AP1O14519 115 aa8□□□□□ -1.13
XRN1-213ENST00000489241 ABHD17AQ96GS6 310 aa8□□□□□ -1.13
XRN1-213ENST00000489241 GDF2Q9UK05 429 aaPredicted RBP8□□□□□ -1.13
XRN1-213ENST00000489241 BACH1O14867 736 aa7.99□□□□□ -1.13
XRN1-213ENST00000489241 BMP4P12644 408 aa7.99□□□□□ -1.13
XRN1-213ENST00000489241 FGFR3P22607 806 aa7.99□□□□□ -1.13
XRN1-213ENST00000489241 PSME1Q06323 249 aa7.99□□□□□ -1.13
XRN1-213ENST00000489241 NLRP8Q86W28 1048 aa7.99□□□□□ -1.13
XRN1-213ENST00000489241 GLMNQ92990 594 aa7.99□□□□□ -1.13
XRN1-213ENST00000489241 AIDAQ96BJ3 306 aa7.99□□□□□ -1.13
XRN1-213ENST00000489241 KLRG1Q96E93 195 aa7.99□□□□□ -1.13
XRN1-213ENST00000489241 DNAAF2Q9NVR5 837 aaKnown RBP7.99□□□□□ -1.13
XRN1-213ENST00000489241 BNIP3LO60238 219 aa7.98□□□□□ -1.13
XRN1-213ENST00000489241 TATP17735 454 aaPredicted RBP7.98□□□□□ -1.13
XRN1-213ENST00000489241 BEND7Q8N7W2 519 aaPredicted RBP7.98□□□□□ -1.13
XRN1-213ENST00000489241 GOLGA6L1Q8N7Z2 621 aa7.98□□□□□ -1.13
XRN1-213ENST00000489241 ZDHHC3Q9NYG2 299 aa7.98□□□□□ -1.13
XRN1-213ENST00000489241 SERPINA10Q9UK55 444 aa7.98□□□□□ -1.13
XRN1-213ENST00000489241 USP3Q9Y6I4 520 aa7.98□□□□□ -1.13
XRN1-213ENST00000489241 CNTNAP5Q8WYK1 1306 aa7.98□□□□□ -1.13
XRN1-213ENST00000489241 FOXK2Q01167 660 aa7.97□□□□□ -1.13
XRN1-213ENST00000489241 ADAMTS19Q8TE59 1207 aa7.97□□□□□ -1.13
XRN1-213ENST00000489241 CCDC97Q96F63 343 aaPredicted RBP7.97□□□□□ -1.13
XRN1-213ENST00000489241 ZCCHC2Q9C0B9 1178 aaKnown RBP7.97□□□□□ -1.13
XRN1-213ENST00000489241 ZNF358Q9NW07 568 aa7.97□□□□□ -1.13
XRN1-213ENST00000489241 CABP1Q9NZU7 370 aa7.97□□□□□ -1.13
XRN1-213ENST00000489241 PCDHGC4Q9Y5F7 938 aa7.97□□□□□ -1.13
XRN1-213ENST00000489241 ARSJQ5FYB0 599 aaPredicted RBP7.96□□□□□ -1.14
XRN1-213ENST00000489241 SLCO4C1Q6ZQN7 724 aa7.96□□□□□ -1.14
XRN1-213ENST00000489241 TRIM50Q86XT4 487 aa7.96□□□□□ -1.14
XRN1-213ENST00000489241 PLEKHM2Q8IWE5 1019 aa7.96□□□□□ -1.14
XRN1-213ENST00000489241 DEPDC4Q8N2C3 294 aa7.96□□□□□ -1.14
XRN1-213ENST00000489241 CCDC82Q8N4S0 544 aa7.96□□□□□ -1.14
XRN1-213ENST00000489241 SCHIP1Q9P0W5 487 aaPredicted RBP7.96□□□□□ -1.14
XRN1-213ENST00000489241 A0A1W2PNR3 127 aa7.95□□□□□ -1.14
XRN1-213ENST00000489241 SHISA8B8ZZ34 492 aa7.95□□□□□ -1.14
XRN1-213ENST00000489241 C2CD2LO14523 706 aa7.95□□□□□ -1.14
XRN1-213ENST00000489241 ATXN7O15265 892 aaPredicted RBP7.95□□□□□ -1.14
XRN1-213ENST00000489241 IGHA1P01876 353 aa7.95□□□□□ -1.14
XRN1-213ENST00000489241 CTBSQ01459 385 aa7.95□□□□□ -1.14
XRN1-213ENST00000489241 C1orf229Q6ZS94 237 aaPredicted RBP7.95□□□□□ -1.14
XRN1-213ENST00000489241 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
XRN1-213ENST00000489241 GALNT6Q8NCL4 622 aa7.95□□□□□ -1.14
XRN1-213ENST00000489241 UCN2Q96RP3 112 aa7.95□□□□□ -1.14
XRN1-213ENST00000489241 USP17L3A6NCW0 530 aa7.94□□□□□ -1.14
XRN1-213ENST00000489241 USP17L4A6NCW7 530 aa7.94□□□□□ -1.14
XRN1-213ENST00000489241 EPHA4P54764 986 aa7.94□□□□□ -1.14
XRN1-213ENST00000489241 GPAT2Q6NUI2 795 aa7.94□□□□□ -1.14
XRN1-213ENST00000489241 USP17L2Q6R6M4 530 aa7.94□□□□□ -1.14
XRN1-213ENST00000489241 USP17L1Q7RTZ2 530 aa7.94□□□□□ -1.14
XRN1-213ENST00000489241 EDARADDQ8WWZ3 215 aa7.94□□□□□ -1.14
XRN1-213ENST00000489241 DCDC2BA2VCK2 349 aa7.93□□□□□ -1.14
XRN1-213ENST00000489241 ARAFP10398 606 aa7.93□□□□□ -1.14
XRN1-213ENST00000489241 ATP1A2P50993 1020 aa7.93□□□□□ -1.14
XRN1-213ENST00000489241 TRIM26Q12899 539 aaPredicted RBP7.93□□□□□ -1.14
XRN1-213ENST00000489241 ZIC5Q96T25 663 aa7.93□□□□□ -1.14
XRN1-213ENST00000489241 PODXL2Q9NZ53 605 aa7.93□□□□□ -1.14
XRN1-213ENST00000489241 GGA1Q9UJY5 639 aa7.93□□□□□ -1.14
XRN1-213ENST00000489241 MKL2Q9ULH7 1088 aa7.93□□□□□ -1.14
XRN1-213ENST00000489241 ATP9BO43861 1147 aa7.92□□□□□ -1.14
XRN1-213ENST00000489241 FAM157BP0CG42 384 aa7.92□□□□□ -1.14
XRN1-213ENST00000489241 MAPTP10636 758 aaKnown RBP7.92□□□□□ -1.14
XRN1-213ENST00000489241 SNRPNP63162 240 aaKnown RBP7.92□□□□□ -1.14
XRN1-213ENST00000489241 FAM182BQ5T319 152 aa7.92□□□□□ -1.14
XRN1-213ENST00000489241 SAMD5Q5TGI4 173 aa7.92□□□□□ -1.14
XRN1-213ENST00000489241 SLC9A9Q8IVB4 645 aa7.92□□□□□ -1.14
XRN1-213ENST00000489241 TPCN2Q8NHX9 752 aa7.92□□□□□ -1.14
XRN1-213ENST00000489241 ZDHHC1Q8WTX9 485 aa7.92□□□□□ -1.14
XRN1-213ENST00000489241 DCAF5Q96JK2 942 aa7.92□□□□□ -1.14
XRN1-213ENST00000489241 PARP3Q9Y6F1 533 aa7.92□□□□□ -1.14
XRN1-213ENST00000489241 GJA3Q9Y6H8 435 aa7.92□□□□□ -1.14
XRN1-213ENST00000489241 KHNYNO15037 678 aaKnown RBP7.91□□□□□ -1.14
XRN1-213ENST00000489241 TXLNAP40222 546 aa7.91□□□□□ -1.14
XRN1-213ENST00000489241 TNP2Q05952 138 aa7.91□□□□□ -1.14
XRN1-213ENST00000489241 TEAD4Q15561 434 aa7.91□□□□□ -1.14
XRN1-213ENST00000489241 BICDL1Q6ZP65 573 aa7.91□□□□□ -1.14
XRN1-213ENST00000489241 L3MBTL2Q969R5 705 aa7.91□□□□□ -1.14
XRN1-213ENST00000489241 RRAGCQ9HB90 399 aa7.91□□□□□ -1.14
XRN1-213ENST00000489241 KIAA1024Q9UPX6 916 aa7.91□□□□□ -1.14
XRN1-213ENST00000489241 EPXP11678 715 aa7.9□□□□□ -1.14
XRN1-213ENST00000489241 CD33P20138 364 aa7.9□□□□□ -1.14
XRN1-213ENST00000489241 AMPD1P23109 780 aa7.9□□□□□ -1.14
XRN1-213ENST00000489241 CLDN10P78369 228 aa7.9□□□□□ -1.14
XRN1-213ENST00000489241 AVENQ9NQS1 362 aaPredicted RBP7.9□□□□□ -1.14
XRN1-213ENST00000489241 HCN2Q9UL51 889 aa7.9□□□□□ -1.14
XRN1-213ENST00000489241 NEURL1BA8MQ27 555 aa7.89□□□□□ -1.15
XRN1-213ENST00000489241 ADH6P28332 368 aa7.89□□□□□ -1.15
XRN1-213ENST00000489241 NOS2P35228 1153 aa7.89□□□□□ -1.15
XRN1-213ENST00000489241 PLA2G4EQ3MJ16 856 aa7.89□□□□□ -1.15
XRN1-213ENST00000489241 CCDC102BQ68D86 513 aa7.89□□□□□ -1.15
XRN1-213ENST00000489241 TNS4Q8IZW8 715 aa7.89□□□□□ -1.15
XRN1-213ENST00000489241 PPP1R12CQ9BZL4 782 aa7.89□□□□□ -1.15
XRN1-213ENST00000489241 TFIP11Q9UBB9 837 aaKnown RBP7.89□□□□□ -1.15
XRN1-213ENST00000489241 ZNF232Q9UNY5 417 aa7.89□□□□□ -1.15
XRN1-213ENST00000489241 GPC6Q9Y625 555 aaPredicted RBP7.89□□□□□ -1.15
XRN1-213ENST00000489241 EML1O00423 815 aa7.88□□□□□ -1.15
XRN1-213ENST00000489241 ZBTB7BO15156 539 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms