RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 PIM2Q9P1W9 311 aa34.93■■■■□ 3.18
RNF220-216ENST00000488865 ZBTB1Q9Y2K1 713 aa34.93■■■■□ 3.18
RNF220-216ENST00000488865 COL15A1P39059 1388 aa34.92■■■■□ 3.18
RNF220-216ENST00000488865 ARHGAP27Q6ZUM4 889 aa34.92■■■■□ 3.18
RNF220-216ENST00000488865 CFAP53Q96M91 514 aa34.92■■■■□ 3.18
RNF220-216ENST00000488865 TEFQ10587 303 aa34.91■■■■□ 3.18
RNF220-216ENST00000488865 IL17REQ8NFR9 667 aa34.91■■■■□ 3.18
RNF220-216ENST00000488865 STARD3NLO95772 234 aa34.89■■■■□ 3.18
RNF220-216ENST00000488865 ARFGEF1Q9Y6D6 1849 aa34.89■■■■□ 3.18
RNF220-216ENST00000488865 CEP350Q5VT06 3117 aa34.88■■■■□ 3.17
RNF220-216ENST00000488865 DALRD3Q5D0E6 543 aaKnown RBP34.87■■■■□ 3.17
RNF220-216ENST00000488865 ZNF790Q6PG37 636 aa34.87■■■■□ 3.17
RNF220-216ENST00000488865 SIPA1L3O60292 1781 aaPredicted RBP34.85■■■■□ 3.17
RNF220-216ENST00000488865 NFIXQ14938 502 aa34.85■■■■□ 3.17
RNF220-216ENST00000488865 TEX13AQ9BXU3 409 aaPredicted RBP34.85■■■■□ 3.17
RNF220-216ENST00000488865 RSPH6AQ9H0K4 717 aa34.85■■■■□ 3.17
RNF220-216ENST00000488865 NUDCQ9Y266 331 aa34.85■■■■□ 3.17
RNF220-216ENST00000488865 CANXP27824 592 aaKnown RBP34.84■■■■□ 3.17
RNF220-216ENST00000488865 ZNF496Q96IT1 587 aaPredicted RBP34.84■■■■□ 3.17
RNF220-216ENST00000488865 BCL2L12Q9HB09 334 aa34.84■■■■□ 3.17
RNF220-216ENST00000488865 CEMIPQ8WUJ3 1361 aa34.84■■■■□ 3.17
RNF220-216ENST00000488865 HEG1Q9ULI3 1381 aa34.84■■■■□ 3.17
RNF220-216ENST00000488865 CHRNA5P30532 468 aa34.83■■■■□ 3.17
RNF220-216ENST00000488865 PRKAR2BP31323 418 aa34.83■■■■□ 3.17
RNF220-216ENST00000488865 EIF5P55010 431 aaKnown RBP34.83■■■■□ 3.17
RNF220-216ENST00000488865 KIF3CO14782 793 aa34.82■■■■□ 3.16
RNF220-216ENST00000488865 PHACTR3Q96KR7 559 aa34.82■■■■□ 3.16
RNF220-216ENST00000488865 NRXN2Q9P2S2 1712 aa34.81■■■■□ 3.16
RNF220-216ENST00000488865 A0A087WZG4 1122 aa34.81■■■■□ 3.16
RNF220-216ENST00000488865 AFDNP55196 1824 aaKnown RBP34.81■■■■□ 3.16
RNF220-216ENST00000488865 PPP2R1AP30153 589 aa34.79■■■■□ 3.16
RNF220-216ENST00000488865 SERPINB2P05120 415 aa34.78■■■■□ 3.16
RNF220-216ENST00000488865 FMNL2Q96PY5 1086 aa34.78■■■■□ 3.16
RNF220-216ENST00000488865 HSPA6P17066 643 aa34.76■■■■□ 3.16
RNF220-216ENST00000488865 C9orf131Q5VYM1 1079 aa34.76■■■■□ 3.16
RNF220-216ENST00000488865 U2AF1L5P0DN76 240 aaPredicted RBP34.75■■■■□ 3.15
RNF220-216ENST00000488865 U2AF1Q01081 240 aaKnown RBP eCLIP34.75■■■■□ 3.15
RNF220-216ENST00000488865 BTBD11A6QL63 1104 aa34.74■■■■□ 3.15
RNF220-216ENST00000488865 IL6STP40189 918 aaPredicted RBP34.74■■■■□ 3.15
RNF220-216ENST00000488865 KCNQ3O43525 872 aa34.69■■■■□ 3.14
RNF220-216ENST00000488865 RTF1Q92541 710 aaKnown RBP34.69■■■■□ 3.14
RNF220-216ENST00000488865 SCN7AQ01118 1682 aa34.69■■■■□ 3.14
RNF220-216ENST00000488865 DLEC1Q9Y238 1755 aa34.69■■■■□ 3.14
RNF220-216ENST00000488865 TOMM70O94826 608 aa34.68■■■■□ 3.14
RNF220-216ENST00000488865 A1BGP04217 495 aa34.68■■■■□ 3.14
RNF220-216ENST00000488865 BICDL1Q6ZP65 573 aa34.68■■■■□ 3.14
RNF220-216ENST00000488865 TBC1D9BQ66K14 1250 aa34.67■■■■□ 3.14
RNF220-216ENST00000488865 RNF181Q9P0P0 153 aa34.67■■■■□ 3.14
RNF220-216ENST00000488865 TBC1D2BQ9UPU7 963 aa34.67■■■■□ 3.14
RNF220-216ENST00000488865 ZNF330Q9Y3S2 320 aaPredicted RBP34.67■■■■□ 3.14
RNF220-216ENST00000488865 NPM2Q86SE8 214 aaKnown RBP34.66■■■■□ 3.14
RNF220-216ENST00000488865 C2CD5Q86YS7 1000 aa34.66■■■■□ 3.14
RNF220-216ENST00000488865 NMRK2Q9NPI5 230 aa34.66■■■■□ 3.14
RNF220-216ENST00000488865 H0YIN7 160 aa34.65■■■■□ 3.14
RNF220-216ENST00000488865 HTATSF1O43719 755 aaKnown RBP34.65■■■■□ 3.14
RNF220-216ENST00000488865 TTLL6Q8N841 843 aa34.65■■■■□ 3.14
RNF220-216ENST00000488865 SBF1O95248 1867 aa34.65■■■■□ 3.14
RNF220-216ENST00000488865 CARMIL3Q8ND23 1372 aa34.64■■■■□ 3.14
RNF220-216ENST00000488865 MCM10Q7L590 875 aa34.63■■■■□ 3.13
RNF220-216ENST00000488865 PDZRN3Q9UPQ7 1066 aa34.63■■■■□ 3.13
RNF220-216ENST00000488865 KDM2BQ8NHM5 1336 aa34.62■■■■□ 3.13
RNF220-216ENST00000488865 USP16Q9Y5T5 823 aa34.62■■■■□ 3.13
RNF220-216ENST00000488865 CAMTA2O94983 1202 aa34.6■■■■□ 3.13
RNF220-216ENST00000488865 SNRPA1P09661 255 aaKnown RBP34.6■■■■□ 3.13
RNF220-216ENST00000488865 BRIP1Q9BX63 1249 aa34.6■■■■□ 3.13
RNF220-216ENST00000488865 ZC3H4Q9UPT8 1303 aaKnown RBP34.58■■■■□ 3.13
RNF220-216ENST00000488865 PDE6BP35913 854 aa34.58■■■■□ 3.13
RNF220-216ENST00000488865 PRR5LQ6MZQ0 368 aa34.58■■■■□ 3.13
RNF220-216ENST00000488865 SETDB2Q96T68 719 aa34.58■■■■□ 3.13
RNF220-216ENST00000488865 ANKRD31Q8N7Z5 1873 aa34.57■■■■□ 3.12
RNF220-216ENST00000488865 RASSF7Q02833 373 aa34.57■■■■□ 3.12
RNF220-216ENST00000488865 DCTN1Q14203 1278 aa34.57■■■■□ 3.12
RNF220-216ENST00000488865 DZIP3Q86Y13 1208 aaKnown RBP34.57■■■■□ 3.12
RNF220-216ENST00000488865 LMNB1P20700 586 aa34.56■■■■□ 3.12
RNF220-216ENST00000488865 BCORQ6W2J9 1755 aa34.55■■■■□ 3.12
RNF220-216ENST00000488865 PRAMEF22A3QJZ6 481 aa34.55■■■■□ 3.12
RNF220-216ENST00000488865 APLP1P51693 650 aa34.55■■■■□ 3.12
RNF220-216ENST00000488865 RBM46Q8TBY0 533 aaKnown RBP34.55■■■■□ 3.12
RNF220-216ENST00000488865 TAF7Q15545 349 aaPredicted RBP34.54■■■■□ 3.12
RNF220-216ENST00000488865 C16orf71Q8IYS4 520 aaPredicted RBP34.54■■■■□ 3.12
RNF220-216ENST00000488865 NEFMP07197 916 aa34.53■■■■□ 3.12
RNF220-216ENST00000488865 CLEC4GQ6UXB4 293 aa34.52■■■■□ 3.12
RNF220-216ENST00000488865 CNBD1Q8NA66 436 aa34.52■■■■□ 3.12
RNF220-216ENST00000488865 ZNF622Q969S3 477 aaKnown RBP eCLIP34.52■■■■□ 3.12
RNF220-216ENST00000488865 PIP4K2AP48426 406 aaPredicted RBP34.51■■■■□ 3.12
RNF220-216ENST00000488865 TNRC6CQ9HCJ0 1690 aaKnown RBP34.5■■■■□ 3.11
RNF220-216ENST00000488865 CCDC24Q8N4L8 307 aa34.5■■■■□ 3.11
RNF220-216ENST00000488865 NPHP1O15259 732 aa34.49■■■■□ 3.11
RNF220-216ENST00000488865 PRELPP51888 382 aa34.49■■■■□ 3.11
RNF220-216ENST00000488865 ST5P78524 1137 aa34.49■■■■□ 3.11
RNF220-216ENST00000488865 RRAGCQ9HB90 399 aa34.49■■■■□ 3.11
RNF220-216ENST00000488865 ZNF652Q9Y2D9 606 aa34.49■■■■□ 3.11
RNF220-216ENST00000488865 COL11A2P13942 1736 aaPredicted RBP34.48■■■■□ 3.11
RNF220-216ENST00000488865 NFKBIEO00221 500 aa34.48■■■■□ 3.11
RNF220-216ENST00000488865 RGL2O15211 777 aa34.48■■■■□ 3.11
RNF220-216ENST00000488865 FSTL1Q12841 308 aa34.47■■■■□ 3.11
RNF220-216ENST00000488865 NBPF26B4DH59 902 aa34.46■■■■□ 3.11
RNF220-216ENST00000488865 NBPF10Q6P3W6 841 aaKnown RBP34.46■■■■□ 3.11
RNF220-216ENST00000488865 NBPF15Q8N660 670 aa34.46■■■■□ 3.11
RNF220-216ENST00000488865 PLEKHF1Q96S99 279 aa34.46■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms