RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 SLC39A6Q13433 755 aa25.29■■□□□ 1.64
ATP1A1-208ENST00000488733 TOGARAM1Q9Y4F4 1720 aa25.29■■□□□ 1.64
ATP1A1-208ENST00000488733 FAM161AQ3B820 660 aa25.29■■□□□ 1.64
ATP1A1-208ENST00000488733 TTC5Q8N0Z6 440 aa25.29■■□□□ 1.64
ATP1A1-208ENST00000488733 PHAXQ9H814 394 aaKnown RBP25.28■■□□□ 1.64
ATP1A1-208ENST00000488733 ATRNO75882 1429 aa25.28■■□□□ 1.64
ATP1A1-208ENST00000488733 TRPC5Q9UL62 973 aaPredicted RBP25.27■■□□□ 1.64
ATP1A1-208ENST00000488733 N4BP2Q86UW6 1770 aaPredicted RBP25.27■■□□□ 1.64
ATP1A1-208ENST00000488733 SIRT2Q8IXJ6 389 aa25.26■■□□□ 1.63
ATP1A1-208ENST00000488733 ANKRD44Q8N8A2 993 aa25.26■■□□□ 1.63
ATP1A1-208ENST00000488733 GJD4Q96KN9 370 aaPredicted RBP25.26■■□□□ 1.63
ATP1A1-208ENST00000488733 MEIS3Q99687 375 aa25.26■■□□□ 1.63
ATP1A1-208ENST00000488733 HYPKQ9NX55 129 aa25.26■■□□□ 1.63
ATP1A1-208ENST00000488733 GNAI3P08754 354 aa25.26■■□□□ 1.63
ATP1A1-208ENST00000488733 TMOD3Q9NYL9 352 aa25.26■■□□□ 1.63
ATP1A1-208ENST00000488733 GLI3P10071 1580 aa25.25■■□□□ 1.63
ATP1A1-208ENST00000488733 NUCB1Q02818 461 aa25.25■■□□□ 1.63
ATP1A1-208ENST00000488733 FMNL2Q96PY5 1086 aa25.25■■□□□ 1.63
ATP1A1-208ENST00000488733 MARCH10Q8NA82 808 aaPredicted RBP25.24■■□□□ 1.63
ATP1A1-208ENST00000488733 FBXO41Q8TF61 875 aa25.24■■□□□ 1.63
ATP1A1-208ENST00000488733 A0A0G2JS52 829 aa25.23■■□□□ 1.63
ATP1A1-208ENST00000488733 SNRPA1P09661 255 aaKnown RBP25.23■■□□□ 1.63
ATP1A1-208ENST00000488733 MYT1Q01538 1121 aa25.23■■□□□ 1.63
ATP1A1-208ENST00000488733 ZNF496Q96IT1 587 aaPredicted RBP25.23■■□□□ 1.63
ATP1A1-208ENST00000488733 DDX21Q9NR30 783 aaKnown RBP eCLIP25.23■■□□□ 1.63
ATP1A1-208ENST00000488733 ATP10DQ9P241 1426 aa25.22■■□□□ 1.63
ATP1A1-208ENST00000488733 THSD7AQ9UPZ6 1657 aa25.22■■□□□ 1.63
ATP1A1-208ENST00000488733 GNAI2P04899 355 aa25.22■■□□□ 1.63
ATP1A1-208ENST00000488733 CEP85Q6P2H3 762 aa25.22■■□□□ 1.63
ATP1A1-208ENST00000488733 DNAAF4Q8WXU2 420 aa25.21■■□□□ 1.63
ATP1A1-208ENST00000488733 CHD1LQ86WJ1 897 aa25.2■■□□□ 1.63
ATP1A1-208ENST00000488733 PIGBQ92521 554 aa25.2■■□□□ 1.63
ATP1A1-208ENST00000488733 SRCIN1Q9C0H9 1055 aa25.2■■□□□ 1.63
ATP1A1-208ENST00000488733 DCTPP1Q9H773 170 aa25.2■■□□□ 1.63
ATP1A1-208ENST00000488733 PAPPAQ13219 1627 aa25.2■■□□□ 1.63
ATP1A1-208ENST00000488733 PRAMEF22A3QJZ6 481 aa25.2■■□□□ 1.62
ATP1A1-208ENST00000488733 HMMRO75330 724 aa25.2■■□□□ 1.62
ATP1A1-208ENST00000488733 C8orf34Q49A92 452 aa25.2■■□□□ 1.62
ATP1A1-208ENST00000488733 QTRT2Q9H974 415 aaKnown RBP25.2■■□□□ 1.62
ATP1A1-208ENST00000488733 BCL9O00512 1426 aa25.19■■□□□ 1.62
ATP1A1-208ENST00000488733 PI4KAP2A4QPH2 592 aa25.19■■□□□ 1.62
ATP1A1-208ENST00000488733 PI4KAP1Q8N8J0 262 aa25.19■■□□□ 1.62
ATP1A1-208ENST00000488733 DDX58O95786 925 aaKnown RBP25.18■■□□□ 1.62
ATP1A1-208ENST00000488733 DOT1LQ8TEK3 1739 aa25.18■■□□□ 1.62
ATP1A1-208ENST00000488733 ANKRD45Q5TZF3 282 aa25.17■■□□□ 1.62
ATP1A1-208ENST00000488733 KSR2Q6VAB6 950 aa25.17■■□□□ 1.62
ATP1A1-208ENST00000488733 ITGB4P16144 1822 aa25.17■■□□□ 1.62
ATP1A1-208ENST00000488733 ANXA1P04083 346 aa25.17■■□□□ 1.62
ATP1A1-208ENST00000488733 SYTL4Q96C24 671 aaPredicted RBP25.17■■□□□ 1.62
ATP1A1-208ENST00000488733 C5P01031 1676 aa25.17■■□□□ 1.62
ATP1A1-208ENST00000488733 UBR2Q8IWV8 1755 aa25.17■■□□□ 1.62
ATP1A1-208ENST00000488733 KCPQ6ZWJ8 1503 aa25.16■■□□□ 1.62
ATP1A1-208ENST00000488733 PRIM1P49642 420 aaKnown RBP25.16■■□□□ 1.62
ATP1A1-208ENST00000488733 PDIA6Q15084 440 aa25.16■■□□□ 1.62
ATP1A1-208ENST00000488733 BEND3Q5T5X7 828 aa25.16■■□□□ 1.62
ATP1A1-208ENST00000488733 ADCY9O60503 1353 aa25.15■■□□□ 1.62
ATP1A1-208ENST00000488733 ONECUT3O60422 494 aaPredicted RBP25.15■■□□□ 1.62
ATP1A1-208ENST00000488733 PROSER3Q2NL68 480 aa25.15■■□□□ 1.62
ATP1A1-208ENST00000488733 USP44Q9H0E7 712 aa25.15■■□□□ 1.62
ATP1A1-208ENST00000488733 ANP32AP39687 249 aaKnown RBP25.15■■□□□ 1.62
ATP1A1-208ENST00000488733 ALDH1L1O75891 902 aa25.14■■□□□ 1.61
ATP1A1-208ENST00000488733 UBTFL1P0CB47 393 aaPredicted RBP25.14■■□□□ 1.61
ATP1A1-208ENST00000488733 LNPKQ9C0E8 428 aa25.14■■□□□ 1.61
ATP1A1-208ENST00000488733 ASAP1Q9ULH1 1129 aa25.14■■□□□ 1.61
ATP1A1-208ENST00000488733 ATG3Q9NT62 314 aa25.13■■□□□ 1.61
ATP1A1-208ENST00000488733 ERBB4Q15303 1308 aa25.13■■□□□ 1.61
ATP1A1-208ENST00000488733 PTCD1O75127 700 aaKnown RBP25.12■■□□□ 1.61
ATP1A1-208ENST00000488733 ZNF772Q68DY9 489 aaPredicted RBP25.12■■□□□ 1.61
ATP1A1-208ENST00000488733 ACSBG1Q96GR2 724 aa25.12■■□□□ 1.61
ATP1A1-208ENST00000488733 ZBTB47Q9UFB7 747 aaPredicted RBP25.12■■□□□ 1.61
ATP1A1-208ENST00000488733 MAP3K2Q9Y2U5 619 aa25.12■■□□□ 1.61
ATP1A1-208ENST00000488733 USP16Q9Y5T5 823 aa25.12■■□□□ 1.61
ATP1A1-208ENST00000488733 HDAC5Q9UQL6 1122 aa25.12■■□□□ 1.61
ATP1A1-208ENST00000488733 ATP8B2P98198 1209 aa25.11■■□□□ 1.61
ATP1A1-208ENST00000488733 SEPT12Q8IYM1 358 aa25.11■■□□□ 1.61
ATP1A1-208ENST00000488733 LAMB4A4D0S4 1761 aa25.11■■□□□ 1.61
ATP1A1-208ENST00000488733 KAT6BQ8WYB5 2073 aa25.1■■□□□ 1.61
ATP1A1-208ENST00000488733 IBTKQ9P2D0 1353 aaPredicted RBP25.08■■□□□ 1.61
ATP1A1-208ENST00000488733 LINS1Q8NG48 757 aa25.08■■□□□ 1.61
ATP1A1-208ENST00000488733 LRRFIP2Q9Y608 721 aaKnown RBP25.08■■□□□ 1.61
ATP1A1-208ENST00000488733 MYL6BP14649 208 aa25.07■■□□□ 1.6
ATP1A1-208ENST00000488733 AIMP1Q12904 312 aaKnown RBP25.06■■□□□ 1.6
ATP1A1-208ENST00000488733 RIC3Q7Z5B4 369 aa25.06■■□□□ 1.6
ATP1A1-208ENST00000488733 COPS6Q7L5N1 327 aa25.06■■□□□ 1.6
ATP1A1-208ENST00000488733 LRP10Q7Z4F1 713 aa25.06■■□□□ 1.6
ATP1A1-208ENST00000488733 VSIG10Q8N0Z9 540 aa25.06■■□□□ 1.6
ATP1A1-208ENST00000488733 XAGE3Q8WTP9 111 aa25.06■■□□□ 1.6
ATP1A1-208ENST00000488733 RBM42Q9BTD8 480 aaKnown RBP25.05■■□□□ 1.6
ATP1A1-208ENST00000488733 KCNQ2O43526 872 aa25.04■■□□□ 1.6
ATP1A1-208ENST00000488733 NEXNQ0ZGT2 675 aa25.04■■□□□ 1.6
ATP1A1-208ENST00000488733 TEX13AQ9BXU3 409 aaPredicted RBP25.04■■□□□ 1.6
ATP1A1-208ENST00000488733 RBM6P78332 1123 aaKnown RBP25.03■■□□□ 1.6
ATP1A1-208ENST00000488733 ANKRD13DQ6ZTN6 518 aa25.03■■□□□ 1.6
ATP1A1-208ENST00000488733 C9orf78Q9NZ63 289 aaPredicted RBP25.03■■□□□ 1.6
ATP1A1-208ENST00000488733 NBPF7P0C2Y1 421 aaPredicted RBP25.02■■□□□ 1.6
ATP1A1-208ENST00000488733 BMP2KLQ5H9B9 411 aa25.02■■□□□ 1.6
ATP1A1-208ENST00000488733 FAM182BQ5T319 152 aa25.02■■□□□ 1.6
ATP1A1-208ENST00000488733 METTL22Q9BUU2 404 aaPredicted RBP25.02■■□□□ 1.6
ATP1A1-208ENST00000488733 NPM2Q86SE8 214 aaKnown RBP25.01■■□□□ 1.59
ATP1A1-208ENST00000488733 SSH3Q8TE77 659 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms