RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TMX3Q96JJ7 454 aa15.5■□□□□ 0.07
CLIC4-202ENST00000488683 CEMIPQ8WUJ3 1361 aa15.5■□□□□ 0.07
CLIC4-202ENST00000488683 PSME1Q06323 249 aa15.5■□□□□ 0.07
CLIC4-202ENST00000488683 LMBRD1Q9NUN5 540 aa15.5■□□□□ 0.07
CLIC4-202ENST00000488683 PIP4K2AP48426 406 aaPredicted RBP15.49■□□□□ 0.07
CLIC4-202ENST00000488683 GPT2Q8TD30 523 aa15.49■□□□□ 0.07
CLIC4-202ENST00000488683 PA2G4Q9UQ80 394 aaKnown RBP15.49■□□□□ 0.07
CLIC4-202ENST00000488683 IP6K1Q92551 441 aa15.49■□□□□ 0.07
CLIC4-202ENST00000488683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.49■□□□□ 0.07
CLIC4-202ENST00000488683 PRKCSHP14314 528 aaPredicted RBP15.48■□□□□ 0.07
CLIC4-202ENST00000488683 CWF19L2Q2TBE0 894 aaKnown RBP15.48■□□□□ 0.07
CLIC4-202ENST00000488683 JARID2Q92833 1246 aaPredicted RBP15.48■□□□□ 0.07
CLIC4-202ENST00000488683 PXDNLA1KZ92 1463 aa15.48■□□□□ 0.07
CLIC4-202ENST00000488683 AIMP1Q12904 312 aaKnown RBP15.48■□□□□ 0.07
CLIC4-202ENST00000488683 DDX17Q92841 729 aaKnown RBP15.48■□□□□ 0.07
CLIC4-202ENST00000488683 SPG7Q9UQ90 795 aa15.48■□□□□ 0.07
CLIC4-202ENST00000488683 MED1Q15648 1581 aaPredicted RBP15.48■□□□□ 0.07
CLIC4-202ENST00000488683 EIF4A1P60842 406 aaKnown RBP15.47■□□□□ 0.07
CLIC4-202ENST00000488683 ZNF530Q6P9A1 599 aaPredicted RBP15.47■□□□□ 0.07
CLIC4-202ENST00000488683 KDM3BQ7LBC6 1761 aa15.47■□□□□ 0.07
CLIC4-202ENST00000488683 SKOR2Q2VWA4 1001 aaPredicted RBP15.47■□□□□ 0.07
CLIC4-202ENST00000488683 BABAM1Q9NWV8 329 aa15.47■□□□□ 0.07
CLIC4-202ENST00000488683 BTBD11A6QL63 1104 aa15.46■□□□□ 0.07
CLIC4-202ENST00000488683 GOLGA6L22H0YM25 854 aa15.46■□□□□ 0.07
CLIC4-202ENST00000488683 NAP1L5Q96NT1 182 aaPredicted RBP15.46■□□□□ 0.07
CLIC4-202ENST00000488683 SSH3Q8TE77 659 aa15.46■□□□□ 0.07
CLIC4-202ENST00000488683 SRCIN1Q9C0H9 1055 aa15.46■□□□□ 0.07
CLIC4-202ENST00000488683 COL9A3Q14050 684 aaPredicted RBP15.45■□□□□ 0.06
CLIC4-202ENST00000488683 ZSCAN23Q3MJ62 389 aa15.45■□□□□ 0.06
CLIC4-202ENST00000488683 CWC27Q6UX04 472 aaKnown RBP15.45■□□□□ 0.06
CLIC4-202ENST00000488683 STAP2Q9UGK3 403 aa15.45■□□□□ 0.06
CLIC4-202ENST00000488683 AXIN2Q9Y2T1 843 aa15.45■□□□□ 0.06
CLIC4-202ENST00000488683 PRIM1P49642 420 aaKnown RBP15.45■□□□□ 0.06
CLIC4-202ENST00000488683 NUCB2P80303 420 aa15.45■□□□□ 0.06
CLIC4-202ENST00000488683 SLC39A6Q13433 755 aa15.45■□□□□ 0.06
CLIC4-202ENST00000488683 MPNDQ8N594 471 aa15.45■□□□□ 0.06
CLIC4-202ENST00000488683 RHPN1Q8TCX5 695 aa15.45■□□□□ 0.06
CLIC4-202ENST00000488683 RBSNQ9H1K0 784 aa15.45■□□□□ 0.06
CLIC4-202ENST00000488683 PXDNQ92626 1479 aa15.44■□□□□ 0.06
CLIC4-202ENST00000488683 NASPP49321 788 aaPredicted RBP15.44■□□□□ 0.06
CLIC4-202ENST00000488683 TEFQ10587 303 aa15.44■□□□□ 0.06
CLIC4-202ENST00000488683 OS9Q13438 667 aaPredicted RBP15.44■□□□□ 0.06
CLIC4-202ENST00000488683 KLHL40Q2TBA0 621 aa15.44■□□□□ 0.06
CLIC4-202ENST00000488683 KLHDC4Q8TBB5 520 aa15.44■□□□□ 0.06
CLIC4-202ENST00000488683 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
CLIC4-202ENST00000488683 RNF214Q8ND24 703 aa15.44■□□□□ 0.06
CLIC4-202ENST00000488683 TMEM63CQ9P1W3 806 aa15.44■□□□□ 0.06
CLIC4-202ENST00000488683 SYCE3A1L190 88 aa15.43■□□□□ 0.06
CLIC4-202ENST00000488683 PTMSP20962 102 aa15.43■□□□□ 0.06
CLIC4-202ENST00000488683 RASEFQ8IZ41 740 aa15.43■□□□□ 0.06
CLIC4-202ENST00000488683 LMO7Q8WWI1 1683 aa15.43■□□□□ 0.06
CLIC4-202ENST00000488683 POLA2Q14181 598 aa15.43■□□□□ 0.06
CLIC4-202ENST00000488683 BEND3Q5T5X7 828 aa15.43■□□□□ 0.06
CLIC4-202ENST00000488683 PI4K2BQ8TCG2 481 aa15.43■□□□□ 0.06
CLIC4-202ENST00000488683 TRIM44Q96DX7 344 aaPredicted RBP15.43■□□□□ 0.06
CLIC4-202ENST00000488683 ISY1Q9ULR0 285 aaKnown RBP15.43■□□□□ 0.06
CLIC4-202ENST00000488683 DNAAF4Q8WXU2 420 aa15.42■□□□□ 0.06
CLIC4-202ENST00000488683 SIL1Q9H173 461 aa15.42■□□□□ 0.06
CLIC4-202ENST00000488683 CWC22Q9HCG8 908 aaKnown RBP15.42■□□□□ 0.06
CLIC4-202ENST00000488683 MAP3K2Q9Y2U5 619 aa15.42■□□□□ 0.06
CLIC4-202ENST00000488683 ADCY9O60503 1353 aa15.42■□□□□ 0.06
CLIC4-202ENST00000488683 ESPNB1AK53 854 aa15.42■□□□□ 0.06
CLIC4-202ENST00000488683 ANKLE2Q86XL3 938 aa15.42■□□□□ 0.06
CLIC4-202ENST00000488683 GADD45BO75293 160 aaPredicted RBP15.41■□□□□ 0.06
CLIC4-202ENST00000488683 ADGRL3Q9HAR2 1447 aa15.41■□□□□ 0.06
CLIC4-202ENST00000488683 MYL6BP14649 208 aa15.4■□□□□ 0.06
CLIC4-202ENST00000488683 CCDC9Q9Y3X0 531 aaKnown RBP15.4■□□□□ 0.06
CLIC4-202ENST00000488683 NDUFB9Q9Y6M9 179 aa15.4■□□□□ 0.06
CLIC4-202ENST00000488683 PHRF1Q9P1Y6 1649 aaKnown RBP15.4■□□□□ 0.06
CLIC4-202ENST00000488683 GCP02774 474 aa15.39■□□□□ 0.05
CLIC4-202ENST00000488683 AKAP4Q5JQC9 854 aa15.39■□□□□ 0.05
CLIC4-202ENST00000488683 TCHHQ07283 1943 aa15.39■□□□□ 0.05
CLIC4-202ENST00000488683 LARGE1O95461 756 aa15.39■□□□□ 0.05
CLIC4-202ENST00000488683 PTH1RQ03431 593 aa15.39■□□□□ 0.05
CLIC4-202ENST00000488683 KCNH5Q8NCM2 988 aa15.39■□□□□ 0.05
CLIC4-202ENST00000488683 C9orf78Q9NZ63 289 aaPredicted RBP15.39■□□□□ 0.05
CLIC4-202ENST00000488683 CHGBP05060 677 aa15.38■□□□□ 0.05
CLIC4-202ENST00000488683 ANKRD24Q8TF21 1146 aa15.38■□□□□ 0.05
CLIC4-202ENST00000488683 TCEANC2Q96MN5 208 aa15.38■□□□□ 0.05
CLIC4-202ENST00000488683 CCDC8Q9H0W5 538 aaPredicted RBP15.38■□□□□ 0.05
CLIC4-202ENST00000488683 TLR7Q9NYK1 1049 aaKnown RBP15.38■□□□□ 0.05
CLIC4-202ENST00000488683 AOX1Q06278 1338 aa15.38■□□□□ 0.05
CLIC4-202ENST00000488683 CABLES1Q8TDN4 633 aa15.38■□□□□ 0.05
CLIC4-202ENST00000488683 RNMTO43148 476 aaKnown RBP15.37■□□□□ 0.05
CLIC4-202ENST00000488683 RAB11FIP3O75154 756 aa15.37■□□□□ 0.05
CLIC4-202ENST00000488683 HOXB7P09629 217 aa15.37■□□□□ 0.05
CLIC4-202ENST00000488683 ADCK5Q3MIX3 580 aa15.37■□□□□ 0.05
CLIC4-202ENST00000488683 ARHGEF25Q86VW2 580 aa15.37■□□□□ 0.05
CLIC4-202ENST00000488683 MCCP23508 829 aa15.37■□□□□ 0.05
CLIC4-202ENST00000488683 CUL4AQ13619 759 aa15.37■□□□□ 0.05
CLIC4-202ENST00000488683 SNX14Q9Y5W7 946 aa15.37■□□□□ 0.05
CLIC4-202ENST00000488683 CLCN1P35523 988 aa15.37■□□□□ 0.05
CLIC4-202ENST00000488683 ANAPC15P60006 121 aa15.37■□□□□ 0.05
CLIC4-202ENST00000488683 PLEKHO1Q53GL0 409 aaPredicted RBP15.37■□□□□ 0.05
CLIC4-202ENST00000488683 KIF1BPQ96EK5 621 aa15.37■□□□□ 0.05
CLIC4-202ENST00000488683 EDC3Q96F86 508 aaKnown RBP15.37■□□□□ 0.05
CLIC4-202ENST00000488683 RGPD5Q99666 1765 aa15.36■□□□□ 0.05
CLIC4-202ENST00000488683 AK2P54819 239 aa15.36■□□□□ 0.05
CLIC4-202ENST00000488683 C1orf141Q5JVX7 400 aa15.36■□□□□ 0.05
CLIC4-202ENST00000488683 ZNF142P52746 1687 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms