RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 CCDC87Q9NVE4 849 aa15.59■□□□□ 0.09
SNU13-208ENST00000488571 C19orf67A6NJJ6 358 aa15.58■□□□□ 0.08
SNU13-208ENST00000488571 PTCD1O75127 700 aaKnown RBP15.58■□□□□ 0.08
SNU13-208ENST00000488571 CRKLP46109 303 aaKnown RBP15.58■□□□□ 0.08
SNU13-208ENST00000488571 MTHFSP49914 203 aa15.58■□□□□ 0.08
SNU13-208ENST00000488571 NFATC2IPQ8NCF5 419 aa15.58■□□□□ 0.08
SNU13-208ENST00000488571 EIF4G2P78344 907 aaKnown RBP eCLIP15.57■□□□□ 0.08
SNU13-208ENST00000488571 SRP68Q9UHB9 627 aaKnown RBP15.57■□□□□ 0.08
SNU13-208ENST00000488571 PARP3Q9Y6F1 533 aa15.57■□□□□ 0.08
SNU13-208ENST00000488571 FCHSD2O94868 740 aa15.56■□□□□ 0.08
SNU13-208ENST00000488571 C1orf141Q5JVX7 400 aa15.56■□□□□ 0.08
SNU13-208ENST00000488571 ARHGAP27Q6ZUM4 889 aa15.56■□□□□ 0.08
SNU13-208ENST00000488571 USP42Q9H9J4 1324 aaKnown RBP15.55■□□□□ 0.08
SNU13-208ENST00000488571 DDR1Q08345 913 aa15.55■□□□□ 0.08
SNU13-208ENST00000488571 FKBP8Q14318 412 aa15.55■□□□□ 0.08
SNU13-208ENST00000488571 SULT6B1Q6IMI4 303 aa15.55■□□□□ 0.08
SNU13-208ENST00000488571 MORC1Q86VD1 984 aa15.55■□□□□ 0.08
SNU13-208ENST00000488571 TOMM70O94826 608 aa15.54■□□□□ 0.08
SNU13-208ENST00000488571 IL13P35225 146 aa15.54■□□□□ 0.08
SNU13-208ENST00000488571 INTS5Q6P9B9 1019 aaKnown RBP15.54■□□□□ 0.08
SNU13-208ENST00000488571 NMRK2Q9NPI5 230 aa15.54■□□□□ 0.08
SNU13-208ENST00000488571 VIRMAQ69YN4 1812 aaKnown RBP15.54■□□□□ 0.08
SNU13-208ENST00000488571 PCGF6Q9BYE7 350 aa15.53■□□□□ 0.08
SNU13-208ENST00000488571 MRC1P22897 1456 aa15.52■□□□□ 0.08
SNU13-208ENST00000488571 C9orf131Q5VYM1 1079 aa15.52■□□□□ 0.08
SNU13-208ENST00000488571 PIM2Q9P1W9 311 aa15.52■□□□□ 0.08
SNU13-208ENST00000488571 POLRMTO00411 1230 aaKnown RBP15.51■□□□□ 0.07
SNU13-208ENST00000488571 TM4SF1P30408 202 aa15.51■□□□□ 0.07
SNU13-208ENST00000488571 APLP1P51693 650 aa15.51■□□□□ 0.07
SNU13-208ENST00000488571 DNAJC5GQ8N7S2 189 aa15.51■□□□□ 0.07
SNU13-208ENST00000488571 SBF1O95248 1867 aa15.5■□□□□ 0.07
SNU13-208ENST00000488571 AFDNP55196 1824 aaKnown RBP15.5■□□□□ 0.07
SNU13-208ENST00000488571 KCPQ6ZWJ8 1503 aa15.5■□□□□ 0.07
SNU13-208ENST00000488571 CHRNA5P30532 468 aa15.5■□□□□ 0.07
SNU13-208ENST00000488571 AKAP4Q5JQC9 854 aa15.5■□□□□ 0.07
SNU13-208ENST00000488571 DNAJC10Q8IXB1 793 aa15.5■□□□□ 0.07
SNU13-208ENST00000488571 SLC52A2Q9HAB3 445 aa15.5■□□□□ 0.07
SNU13-208ENST00000488571 LGR6Q9HBX8 967 aa15.5■□□□□ 0.07
SNU13-208ENST00000488571 KNSTRNQ9Y448 316 aa15.5■□□□□ 0.07
SNU13-208ENST00000488571 WDR90Q96KV7 1748 aa15.5■□□□□ 0.07
SNU13-208ENST00000488571 NRXN2Q9P2S2 1712 aa15.5■□□□□ 0.07
SNU13-208ENST00000488571 SOS1Q07889 1333 aaPredicted RBP15.49■□□□□ 0.07
SNU13-208ENST00000488571 DALRD3Q5D0E6 543 aaKnown RBP15.49■□□□□ 0.07
SNU13-208ENST00000488571 AMER1Q5JTC6 1135 aaPredicted RBP15.49■□□□□ 0.07
SNU13-208ENST00000488571 CYP19A1P11511 503 aaPredicted RBP15.48■□□□□ 0.07
SNU13-208ENST00000488571 USPL1Q5W0Q7 1092 aa15.48■□□□□ 0.07
SNU13-208ENST00000488571 FARP1Q9Y4F1 1045 aaPredicted RBP15.48■□□□□ 0.07
SNU13-208ENST00000488571 UBR2Q8IWV8 1755 aa15.47■□□□□ 0.07
SNU13-208ENST00000488571 DLEC1Q9Y238 1755 aa15.47■□□□□ 0.07
SNU13-208ENST00000488571 RNMTO43148 476 aaKnown RBP15.47■□□□□ 0.07
SNU13-208ENST00000488571 SLC39A6Q13433 755 aa15.47■□□□□ 0.07
SNU13-208ENST00000488571 RBM46Q8TBY0 533 aaKnown RBP15.47■□□□□ 0.07
SNU13-208ENST00000488571 TNRC6CQ9HCJ0 1690 aaKnown RBP15.47■□□□□ 0.07
SNU13-208ENST00000488571 ZPR1O75312 459 aa15.46■□□□□ 0.07
SNU13-208ENST00000488571 HMOX1P09601 288 aa15.46■□□□□ 0.07
SNU13-208ENST00000488571 RNF181Q9P0P0 153 aa15.46■□□□□ 0.07
SNU13-208ENST00000488571 COL15A1P39059 1388 aa15.46■□□□□ 0.07
SNU13-208ENST00000488571 NFIXQ14938 502 aa15.45■□□□□ 0.06
SNU13-208ENST00000488571 BCL2L12Q9HB09 334 aa15.45■□□□□ 0.06
SNU13-208ENST00000488571 NARFQ9UHQ1 456 aa15.45■□□□□ 0.06
SNU13-208ENST00000488571 ZBTB1Q9Y2K1 713 aa15.45■□□□□ 0.06
SNU13-208ENST00000488571 MTHFSDQ2M296 383 aaKnown RBP15.44■□□□□ 0.06
SNU13-208ENST00000488571 KDM2BQ8NHM5 1336 aa15.43■□□□□ 0.06
SNU13-208ENST00000488571 HTRA3P83110 453 aa15.43■□□□□ 0.06
SNU13-208ENST00000488571 RRAGCQ9HB90 399 aa15.43■□□□□ 0.06
SNU13-208ENST00000488571 KIF7Q2M1P5 1343 aa15.43■□□□□ 0.06
SNU13-208ENST00000488571 PRELPP51888 382 aa15.42■□□□□ 0.06
SNU13-208ENST00000488571 RASSF7Q02833 373 aa15.42■□□□□ 0.06
SNU13-208ENST00000488571 FSTL1Q12841 308 aa15.42■□□□□ 0.06
SNU13-208ENST00000488571 CARMIL3Q8ND23 1372 aa15.41■□□□□ 0.06
SNU13-208ENST00000488571 PER1O15534 1290 aaPredicted RBP15.41■□□□□ 0.06
SNU13-208ENST00000488571 C16orf71Q8IYS4 520 aaPredicted RBP15.41■□□□□ 0.06
SNU13-208ENST00000488571 VSIG10Q8N0Z9 540 aa15.41■□□□□ 0.06
SNU13-208ENST00000488571 COL3A1P02461 1466 aaPredicted RBP15.4■□□□□ 0.06
SNU13-208ENST00000488571 TIAM2Q8IVF5 1701 aa15.4■□□□□ 0.06
SNU13-208ENST00000488571 SIPA1L3O60292 1781 aaPredicted RBP15.4■□□□□ 0.06
SNU13-208ENST00000488571 SERPINB2P05120 415 aa15.4■□□□□ 0.06
SNU13-208ENST00000488571 KLRG1Q96E93 195 aa15.4■□□□□ 0.06
SNU13-208ENST00000488571 CCDC88AQ3V6T2 1871 aa15.4■□□□□ 0.06
SNU13-208ENST00000488571 ANKRD31Q8N7Z5 1873 aa15.4■□□□□ 0.06
SNU13-208ENST00000488571 SCN7AQ01118 1682 aa15.39■□□□□ 0.05
SNU13-208ENST00000488571 DIAPH1O60610 1272 aaKnown RBP15.39■□□□□ 0.05
SNU13-208ENST00000488571 CREBZFQ9NS37 354 aa15.39■□□□□ 0.05
SNU13-208ENST00000488571 ZC3H4Q9UPT8 1303 aaKnown RBP15.39■□□□□ 0.05
SNU13-208ENST00000488571 LMNB1P20700 586 aa15.38■□□□□ 0.05
SNU13-208ENST00000488571 CANXP27824 592 aaKnown RBP15.38■□□□□ 0.05
SNU13-208ENST00000488571 EIF5P55010 431 aaKnown RBP15.38■□□□□ 0.05
SNU13-208ENST00000488571 CC2D1BQ5T0F9 858 aaKnown RBP15.38■□□□□ 0.05
SNU13-208ENST00000488571 TTLL6Q8N841 843 aa15.38■□□□□ 0.05
SNU13-208ENST00000488571 JMYQ8N9B5 988 aa15.38■□□□□ 0.05
SNU13-208ENST00000488571 COL11A2P13942 1736 aaPredicted RBP15.37■□□□□ 0.05
SNU13-208ENST00000488571 CCER1Q8TC90 406 aaPredicted RBP15.37■□□□□ 0.05
SNU13-208ENST00000488571 NFKBIEO00221 500 aa15.36■□□□□ 0.05
SNU13-208ENST00000488571 C2CD5Q86YS7 1000 aa15.36■□□□□ 0.05
SNU13-208ENST00000488571 IL17REQ8NFR9 667 aa15.36■□□□□ 0.05
SNU13-208ENST00000488571 ZNF496Q96IT1 587 aaPredicted RBP15.36■□□□□ 0.05
SNU13-208ENST00000488571 HEG1Q9ULI3 1381 aa15.36■□□□□ 0.05
SNU13-208ENST00000488571 GLTPD2A6NH11 291 aa15.35■□□□□ 0.05
SNU13-208ENST00000488571 STARD3NLO95772 234 aa15.35■□□□□ 0.05
SNU13-208ENST00000488571 TBC1D9BQ66K14 1250 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms