RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 DNAJC5GQ8N7S2 189 aa16.73■□□□□ 0.27
TTC3-221ENST00000488522 RBM46Q8TBY0 533 aaKnown RBP16.73■□□□□ 0.27
TTC3-221ENST00000488522 NMRK2Q9NPI5 230 aa16.73■□□□□ 0.27
TTC3-221ENST00000488522 KNSTRNQ9Y448 316 aa16.73■□□□□ 0.27
TTC3-221ENST00000488522 DALRD3Q5D0E6 543 aaKnown RBP16.72■□□□□ 0.27
TTC3-221ENST00000488522 CYP19A1P11511 503 aaPredicted RBP16.71■□□□□ 0.27
TTC3-221ENST00000488522 DNAJC10Q8IXB1 793 aa16.71■□□□□ 0.27
TTC3-221ENST00000488522 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
TTC3-221ENST00000488522 COL15A1P39059 1388 aa16.7■□□□□ 0.26
TTC3-221ENST00000488522 VSIG10Q8N0Z9 540 aa16.7■□□□□ 0.26
TTC3-221ENST00000488522 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
TTC3-221ENST00000488522 FSTL1Q12841 308 aa16.69■□□□□ 0.26
TTC3-221ENST00000488522 USPL1Q5W0Q7 1092 aa16.69■□□□□ 0.26
TTC3-221ENST00000488522 NARFQ9UHQ1 456 aa16.69■□□□□ 0.26
TTC3-221ENST00000488522 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
TTC3-221ENST00000488522 ZPR1O75312 459 aa16.68■□□□□ 0.26
TTC3-221ENST00000488522 CHRNA5P30532 468 aa16.68■□□□□ 0.26
TTC3-221ENST00000488522 LGR6Q9HBX8 967 aa16.68■□□□□ 0.26
TTC3-221ENST00000488522 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
TTC3-221ENST00000488522 HOXD11P31277 338 aaPredicted RBP16.67■□□□□ 0.26
TTC3-221ENST00000488522 BCL2L12Q9HB09 334 aa16.67■□□□□ 0.26
TTC3-221ENST00000488522 RNF181Q9P0P0 153 aa16.67■□□□□ 0.26
TTC3-221ENST00000488522 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
TTC3-221ENST00000488522 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
TTC3-221ENST00000488522 SCN7AQ01118 1682 aa16.66■□□□□ 0.26
TTC3-221ENST00000488522 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
TTC3-221ENST00000488522 NFIXQ14938 502 aa16.66■□□□□ 0.26
TTC3-221ENST00000488522 ZBTB1Q9Y2K1 713 aa16.66■□□□□ 0.26
TTC3-221ENST00000488522 KIF7Q2M1P5 1343 aa16.66■□□□□ 0.26
TTC3-221ENST00000488522 PER1O15534 1290 aaPredicted RBP16.65■□□□□ 0.26
TTC3-221ENST00000488522 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.26
TTC3-221ENST00000488522 SLC39A6Q13433 755 aa16.64■□□□□ 0.25
TTC3-221ENST00000488522 MTHFSDQ2M296 383 aaKnown RBP16.64■□□□□ 0.25
TTC3-221ENST00000488522 JMYQ8N9B5 988 aa16.64■□□□□ 0.25
TTC3-221ENST00000488522 TIAM2Q8IVF5 1701 aa16.64■□□□□ 0.25
TTC3-221ENST00000488522 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
TTC3-221ENST00000488522 HMOX1P09601 288 aa16.63■□□□□ 0.25
TTC3-221ENST00000488522 C16orf71Q8IYS4 520 aaPredicted RBP16.63■□□□□ 0.25
TTC3-221ENST00000488522 SERPINB2P05120 415 aa16.62■□□□□ 0.25
TTC3-221ENST00000488522 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
TTC3-221ENST00000488522 KLRG1Q96E93 195 aa16.62■□□□□ 0.25
TTC3-221ENST00000488522 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
TTC3-221ENST00000488522 DIAPH1O60610 1272 aaKnown RBP16.61■□□□□ 0.25
TTC3-221ENST00000488522 LMNB1P20700 586 aa16.61■□□□□ 0.25
TTC3-221ENST00000488522 PRELPP51888 382 aa16.61■□□□□ 0.25
TTC3-221ENST00000488522 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
TTC3-221ENST00000488522 RASSF7Q02833 373 aa16.6■□□□□ 0.25
TTC3-221ENST00000488522 TTLL6Q8N841 843 aa16.6■□□□□ 0.25
TTC3-221ENST00000488522 RRAGCQ9HB90 399 aa16.6■□□□□ 0.25
TTC3-221ENST00000488522 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
TTC3-221ENST00000488522 DICER1Q9UPY3 1922 aaKnown RBP16.59■□□□□ 0.25
TTC3-221ENST00000488522 A0A087WZG4 1122 aa16.59■□□□□ 0.25
TTC3-221ENST00000488522 GLTPD2A6NH11 291 aa16.59■□□□□ 0.25
TTC3-221ENST00000488522 STARD3NLO95772 234 aa16.59■□□□□ 0.25
TTC3-221ENST00000488522 SMC1BQ8NDV3 1235 aa16.59■□□□□ 0.25
TTC3-221ENST00000488522 PDZRN3Q9UPQ7 1066 aa16.59■□□□□ 0.25
TTC3-221ENST00000488522 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
TTC3-221ENST00000488522 HEG1Q9ULI3 1381 aa16.59■□□□□ 0.25
TTC3-221ENST00000488522 BCORQ6W2J9 1755 aa16.59■□□□□ 0.25
TTC3-221ENST00000488522 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
TTC3-221ENST00000488522 PCNTO95613 3336 aa16.58■□□□□ 0.24
TTC3-221ENST00000488522 NFKBIEO00221 500 aa16.58■□□□□ 0.24
TTC3-221ENST00000488522 TEX13AQ9BXU3 409 aaPredicted RBP16.58■□□□□ 0.24
TTC3-221ENST00000488522 ARFGEF2Q9Y6D5 1785 aa16.57■□□□□ 0.24
TTC3-221ENST00000488522 ZNF790Q6PG37 636 aa16.57■□□□□ 0.24
TTC3-221ENST00000488522 C2CD5Q86YS7 1000 aa16.57■□□□□ 0.24
TTC3-221ENST00000488522 TTC5Q8N0Z6 440 aa16.57■□□□□ 0.24
TTC3-221ENST00000488522 GAS2L2Q8NHY3 880 aa16.57■□□□□ 0.24
TTC3-221ENST00000488522 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
TTC3-221ENST00000488522 LTBP3Q9NS15 1303 aa16.56■□□□□ 0.24
TTC3-221ENST00000488522 H0YIN7 160 aa16.56■□□□□ 0.24
TTC3-221ENST00000488522 CANXP27824 592 aaKnown RBP16.56■□□□□ 0.24
TTC3-221ENST00000488522 ZEB1P37275 1124 aaPredicted RBP16.56■□□□□ 0.24
TTC3-221ENST00000488522 IL6STP40189 918 aaPredicted RBP16.56■□□□□ 0.24
TTC3-221ENST00000488522 IL17REQ8NFR9 667 aa16.56■□□□□ 0.24
TTC3-221ENST00000488522 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
TTC3-221ENST00000488522 VEGFAP15692 232 aaPredicted RBP16.55■□□□□ 0.24
TTC3-221ENST00000488522 HTRA3P83110 453 aa16.55■□□□□ 0.24
TTC3-221ENST00000488522 BRIP1Q9BX63 1249 aa16.55■□□□□ 0.24
TTC3-221ENST00000488522 TEFQ10587 303 aa16.54■□□□□ 0.24
TTC3-221ENST00000488522 TBC1D9BQ66K14 1250 aa16.54■□□□□ 0.24
TTC3-221ENST00000488522 PRR5LQ6MZQ0 368 aa16.54■□□□□ 0.24
TTC3-221ENST00000488522 POTECB2RU33 542 aa16.53■□□□□ 0.24
TTC3-221ENST00000488522 PDE6BP35913 854 aa16.53■□□□□ 0.24
TTC3-221ENST00000488522 CC2D1BQ5T0F9 858 aaKnown RBP16.52■□□□□ 0.24
TTC3-221ENST00000488522 FMNL2Q96PY5 1086 aa16.52■□□□□ 0.24
TTC3-221ENST00000488522 CAMTA2O94983 1202 aa16.51■□□□□ 0.23
TTC3-221ENST00000488522 SLX4Q8IY92 1834 aa16.5■□□□□ 0.23
TTC3-221ENST00000488522 RGL2O15211 777 aa16.5■□□□□ 0.23
TTC3-221ENST00000488522 BICDL1Q6ZP65 573 aa16.5■□□□□ 0.23
TTC3-221ENST00000488522 STYK1Q6J9G0 422 aa16.49■□□□□ 0.23
TTC3-221ENST00000488522 TBC1D2BQ9UPU7 963 aa16.49■□□□□ 0.23
TTC3-221ENST00000488522 U2SURPO15042 1029 aaKnown RBP16.48■□□□□ 0.23
TTC3-221ENST00000488522 SRGNP10124 158 aa16.48■□□□□ 0.23
TTC3-221ENST00000488522 COL13A1Q5TAT6 717 aaPredicted RBP16.48■□□□□ 0.23
TTC3-221ENST00000488522 DPY19L2Q6NUT2 758 aa16.48■□□□□ 0.23
TTC3-221ENST00000488522 CNBD1Q8NA66 436 aa16.48■□□□□ 0.23
TTC3-221ENST00000488522 RSPH6AQ9H0K4 717 aa16.48■□□□□ 0.23
TTC3-221ENST00000488522 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
TTC3-221ENST00000488522 C21orf2O43822 256 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms