RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 NUCB1Q02818 461 aa25.36■■□□□ 1.65
NECAB3-213ENST00000488489 GLI3P10071 1580 aa25.35■■□□□ 1.65
NECAB3-213ENST00000488489 RPAP2Q8IXW5 612 aaPredicted RBP25.35■■□□□ 1.65
NECAB3-213ENST00000488489 HYPKQ9NX55 129 aa25.35■■□□□ 1.65
NECAB3-213ENST00000488489 ZBTB47Q9UFB7 747 aaPredicted RBP25.35■■□□□ 1.65
NECAB3-213ENST00000488489 C8orf34Q49A92 452 aa25.34■■□□□ 1.65
NECAB3-213ENST00000488489 DNAAF4Q8WXU2 420 aa25.34■■□□□ 1.65
NECAB3-213ENST00000488489 GCC1Q96CN9 775 aa25.34■■□□□ 1.65
NECAB3-213ENST00000488489 USP44Q9H0E7 712 aa25.34■■□□□ 1.65
NECAB3-213ENST00000488489 SPATA31A1Q5TZJ5 1347 aa25.33■■□□□ 1.65
NECAB3-213ENST00000488489 FAM161AQ3B820 660 aa25.33■■□□□ 1.64
NECAB3-213ENST00000488489 BEND3Q5T5X7 828 aa25.33■■□□□ 1.64
NECAB3-213ENST00000488489 SRCIN1Q9C0H9 1055 aa25.32■■□□□ 1.64
NECAB3-213ENST00000488489 GNAI2P04899 355 aa25.31■■□□□ 1.64
NECAB3-213ENST00000488489 GNAI3P08754 354 aa25.31■■□□□ 1.64
NECAB3-213ENST00000488489 DEKP35659 375 aaKnown RBP25.31■■□□□ 1.64
NECAB3-213ENST00000488489 CHD1LQ86WJ1 897 aa25.31■■□□□ 1.64
NECAB3-213ENST00000488489 LNPKQ9C0E8 428 aa25.31■■□□□ 1.64
NECAB3-213ENST00000488489 DCTPP1Q9H773 170 aa25.31■■□□□ 1.64
NECAB3-213ENST00000488489 SLIT2O94813 1529 aa25.31■■□□□ 1.64
NECAB3-213ENST00000488489 UBR2Q8IWV8 1755 aa25.31■■□□□ 1.64
NECAB3-213ENST00000488489 EXOC5O00471 708 aa25.3■■□□□ 1.64
NECAB3-213ENST00000488489 MYL6BP14649 208 aa25.3■■□□□ 1.64
NECAB3-213ENST00000488489 KSR2Q6VAB6 950 aa25.3■■□□□ 1.64
NECAB3-213ENST00000488489 LRP10Q7Z4F1 713 aa25.3■■□□□ 1.64
NECAB3-213ENST00000488489 CERKQ8TCT0 537 aa25.3■■□□□ 1.64
NECAB3-213ENST00000488489 MAP3K2Q9Y2U5 619 aa25.3■■□□□ 1.64
NECAB3-213ENST00000488489 WNK3Q9BYP7 1800 aa25.3■■□□□ 1.64
NECAB3-213ENST00000488489 PAPPAQ13219 1627 aa25.3■■□□□ 1.64
NECAB3-213ENST00000488489 PIP4K2AP48426 406 aaPredicted RBP25.3■■□□□ 1.64
NECAB3-213ENST00000488489 ANKRD45Q5TZF3 282 aa25.3■■□□□ 1.64
NECAB3-213ENST00000488489 KCPQ6ZWJ8 1503 aa25.29■■□□□ 1.64
NECAB3-213ENST00000488489 AIMP1Q12904 312 aaKnown RBP25.29■■□□□ 1.64
NECAB3-213ENST00000488489 NBR1Q14596 966 aa25.28■■□□□ 1.64
NECAB3-213ENST00000488489 TMOD3Q9NYL9 352 aa25.28■■□□□ 1.64
NECAB3-213ENST00000488489 PTCD1O75127 700 aaKnown RBP25.28■■□□□ 1.64
NECAB3-213ENST00000488489 JCADQ9P266 1359 aa25.28■■□□□ 1.64
NECAB3-213ENST00000488489 NWD2Q9ULI1 1742 aa25.27■■□□□ 1.64
NECAB3-213ENST00000488489 PIGBQ92521 554 aa25.27■■□□□ 1.64
NECAB3-213ENST00000488489 SPATA31A5Q5VU36 1347 aa25.27■■□□□ 1.64
NECAB3-213ENST00000488489 SPATA31A7Q8IWB4 1347 aa25.27■■□□□ 1.64
NECAB3-213ENST00000488489 TNS2Q63HR2 1409 aa25.27■■□□□ 1.64
NECAB3-213ENST00000488489 THRAP3Q9Y2W1 955 aaKnown RBP25.27■■□□□ 1.64
NECAB3-213ENST00000488489 LRRFIP2Q9Y608 721 aaKnown RBP25.26■■□□□ 1.63
NECAB3-213ENST00000488489 XAGE3Q8WTP9 111 aa25.25■■□□□ 1.63
NECAB3-213ENST00000488489 KAT6BQ8WYB5 2073 aa25.25■■□□□ 1.63
NECAB3-213ENST00000488489 NBPF7P0C2Y1 421 aaPredicted RBP25.25■■□□□ 1.63
NECAB3-213ENST00000488489 COPS6Q7L5N1 327 aa25.25■■□□□ 1.63
NECAB3-213ENST00000488489 LAMB4A4D0S4 1761 aa25.25■■□□□ 1.63
NECAB3-213ENST00000488489 ITGB4P16144 1822 aa25.25■■□□□ 1.63
NECAB3-213ENST00000488489 UBTFL1P0CB47 393 aaPredicted RBP25.24■■□□□ 1.63
NECAB3-213ENST00000488489 ASAP1Q9ULH1 1129 aa25.24■■□□□ 1.63
NECAB3-213ENST00000488489 CDCA7Q9BWT1 371 aaPredicted RBP25.24■■□□□ 1.63
NECAB3-213ENST00000488489 DDX58O95786 925 aaKnown RBP25.23■■□□□ 1.63
NECAB3-213ENST00000488489 PNMA6EA0A0J9YXQ4 647 aa25.22■■□□□ 1.63
NECAB3-213ENST00000488489 CWF19L2Q2TBE0 894 aaKnown RBP25.22■■□□□ 1.63
NECAB3-213ENST00000488489 C8orf37Q96NL8 207 aa25.22■■□□□ 1.63
NECAB3-213ENST00000488489 NBPF26B4DH59 902 aa25.22■■□□□ 1.63
NECAB3-213ENST00000488489 NBPF14Q5TI25 921 aa25.22■■□□□ 1.63
NECAB3-213ENST00000488489 NBPF10Q6P3W6 841 aaKnown RBP25.22■■□□□ 1.63
NECAB3-213ENST00000488489 NBPF15Q8N660 670 aa25.22■■□□□ 1.63
NECAB3-213ENST00000488489 CCDC9Q9Y3X0 531 aaKnown RBP25.22■■□□□ 1.63
NECAB3-213ENST00000488489 HMMRO75330 724 aa25.21■■□□□ 1.63
NECAB3-213ENST00000488489 ATP8B2P98198 1209 aa25.21■■□□□ 1.63
NECAB3-213ENST00000488489 UNC5CLQ8IV45 518 aa25.21■■□□□ 1.63
NECAB3-213ENST00000488489 ATG3Q9NT62 314 aa25.21■■□□□ 1.63
NECAB3-213ENST00000488489 DDB1Q16531 1140 aa25.21■■□□□ 1.63
NECAB3-213ENST00000488489 NGLY1Q96IV0 654 aa25.21■■□□□ 1.63
NECAB3-213ENST00000488489 BCL9LQ86UU0 1499 aa25.2■■□□□ 1.62
NECAB3-213ENST00000488489 ALDH1L1O75891 902 aa25.2■■□□□ 1.62
NECAB3-213ENST00000488489 RIC3Q7Z5B4 369 aa25.2■■□□□ 1.62
NECAB3-213ENST00000488489 LRP6O75581 1613 aa25.2■■□□□ 1.62
NECAB3-213ENST00000488489 BCL9O00512 1426 aa25.19■■□□□ 1.62
NECAB3-213ENST00000488489 LINS1Q8NG48 757 aa25.19■■□□□ 1.62
NECAB3-213ENST00000488489 A1BGP04217 495 aa25.19■■□□□ 1.62
NECAB3-213ENST00000488489 BARGINQ6ZT62 677 aa25.19■■□□□ 1.62
NECAB3-213ENST00000488489 IGKV5-2P06315 115 aa25.18■■□□□ 1.62
NECAB3-213ENST00000488489 ANKRD13DQ6ZTN6 518 aa25.18■■□□□ 1.62
NECAB3-213ENST00000488489 NPM2Q86SE8 214 aaKnown RBP25.18■■□□□ 1.62
NECAB3-213ENST00000488489 ERBB4Q15303 1308 aa25.17■■□□□ 1.62
NECAB3-213ENST00000488489 APBB1O00213 710 aa25.16■■□□□ 1.62
NECAB3-213ENST00000488489 MARCH10Q8NA82 808 aaPredicted RBP25.16■■□□□ 1.62
NECAB3-213ENST00000488489 SYTL4Q96C24 671 aaPredicted RBP25.16■■□□□ 1.62
NECAB3-213ENST00000488489 PRIM1P49642 420 aaKnown RBP25.16■■□□□ 1.62
NECAB3-213ENST00000488489 SEC24BO95487 1268 aa25.15■■□□□ 1.62
NECAB3-213ENST00000488489 RTL5Q5HYW3 569 aaPredicted RBP25.15■■□□□ 1.62
NECAB3-213ENST00000488489 C16orf71Q8IYS4 520 aaPredicted RBP25.15■■□□□ 1.62
NECAB3-213ENST00000488489 FNBP4Q8N3X1 1017 aaPredicted RBP25.15■■□□□ 1.62
NECAB3-213ENST00000488489 METTL22Q9BUU2 404 aaPredicted RBP25.15■■□□□ 1.62
NECAB3-213ENST00000488489 C9orf78Q9NZ63 289 aaPredicted RBP25.15■■□□□ 1.62
NECAB3-213ENST00000488489 SMARCA5O60264 1052 aaPredicted RBP25.15■■□□□ 1.62
NECAB3-213ENST00000488489 EXOC6BQ9Y2D4 811 aa25.15■■□□□ 1.62
NECAB3-213ENST00000488489 SPATA31A6Q5VVP1 1343 aa25.14■■□□□ 1.62
NECAB3-213ENST00000488489 PPP1R42Q7Z4L9 355 aa25.14■■□□□ 1.62
NECAB3-213ENST00000488489 SSH3Q8TE77 659 aa25.14■■□□□ 1.62
NECAB3-213ENST00000488489 HSPA1LP34931 641 aa25.13■■□□□ 1.61
NECAB3-213ENST00000488489 VPS72Q15906 364 aa25.13■■□□□ 1.61
NECAB3-213ENST00000488489 DOT1LQ8TEK3 1739 aa25.13■■□□□ 1.61
NECAB3-213ENST00000488489 DNAJC10Q8IXB1 793 aa25.13■■□□□ 1.61
NECAB3-213ENST00000488489 VSIG10Q8N0Z9 540 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms