RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ZBTB7BO15156 539 aaPredicted RBP8.3□□□□□ -1.08
ITGB1-214ENST00000488427 MTFR1Q15390 333 aa8.3□□□□□ -1.08
ITGB1-214ENST00000488427 SWI5Q1ZZU3 235 aa8.3□□□□□ -1.08
ITGB1-214ENST00000488427 NBPF1Q3BBV0 1214 aa8.3□□□□□ -1.08
ITGB1-214ENST00000488427 PRICKLE2Q7Z3G6 844 aa8.3□□□□□ -1.08
ITGB1-214ENST00000488427 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.3□□□□□ -1.08
ITGB1-214ENST00000488427 FHDC1Q9C0D6 1143 aaPredicted RBP8.3□□□□□ -1.08
ITGB1-214ENST00000488427 MARSP56192 900 aaKnown RBP8.29□□□□□ -1.08
ITGB1-214ENST00000488427 NBPF10Q6P3W6 841 aaKnown RBP8.29□□□□□ -1.08
ITGB1-214ENST00000488427 C1orf216Q8TAB5 229 aa8.29□□□□□ -1.08
ITGB1-214ENST00000488427 WHAMMQ8TF30 809 aa8.29□□□□□ -1.08
ITGB1-214ENST00000488427 HINFPQ9BQA5 517 aa8.29□□□□□ -1.08
ITGB1-214ENST00000488427 SCHIP1Q9P0W5 487 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-214ENST00000488427 KIAA1024Q9UPX6 916 aa8.29□□□□□ -1.08
ITGB1-214ENST00000488427 A0A1B0GTH6 734 aa8.28□□□□□ -1.08
ITGB1-214ENST00000488427 ARHGEF15O94989 841 aa8.28□□□□□ -1.08
ITGB1-214ENST00000488427 IRS1P35568 1242 aa8.28□□□□□ -1.08
ITGB1-214ENST00000488427 CDCA8Q53HL2 280 aa8.28□□□□□ -1.08
ITGB1-214ENST00000488427 GMCL1Q96IK5 515 aa8.28□□□□□ -1.08
ITGB1-214ENST00000488427 TIMMDC1Q9NPL8 285 aa8.28□□□□□ -1.08
ITGB1-214ENST00000488427 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.28□□□□□ -1.08
ITGB1-214ENST00000488427 DYRK1BQ9Y463 629 aa8.28□□□□□ -1.08
ITGB1-214ENST00000488427 DNMT3AQ9Y6K1 912 aaPredicted RBP8.28□□□□□ -1.08
ITGB1-214ENST00000488427 TATP17735 454 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-214ENST00000488427 PSMA6P60900 246 aaKnown RBP8.27□□□□□ -1.09
ITGB1-214ENST00000488427 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
ITGB1-214ENST00000488427 CABP1Q9NZU7 370 aa8.27□□□□□ -1.09
ITGB1-214ENST00000488427 SFI1A8K8P3 1242 aa8.26□□□□□ -1.09
ITGB1-214ENST00000488427 H7C1W4 665 aa8.26□□□□□ -1.09
ITGB1-214ENST00000488427 POU4F2Q12837 409 aa8.26□□□□□ -1.09
ITGB1-214ENST00000488427 B4GALNT3Q6L9W6 998 aa8.26□□□□□ -1.09
ITGB1-214ENST00000488427 PGBD3Q8N328 593 aa8.26□□□□□ -1.09
ITGB1-214ENST00000488427 VTI1AQ96AJ9 217 aa8.26□□□□□ -1.09
ITGB1-214ENST00000488427 SCARF2Q96GP6 870 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-214ENST00000488427 SENP3-EIF4A1A0A087X0R7 540 aa8.25□□□□□ -1.09
ITGB1-214ENST00000488427 ADAMTS2O95450 1211 aa8.25□□□□□ -1.09
ITGB1-214ENST00000488427 IGHA1P01876 353 aa8.25□□□□□ -1.09
ITGB1-214ENST00000488427 SRPK2P78362 688 aaKnown RBP8.25□□□□□ -1.09
ITGB1-214ENST00000488427 MAP3K10Q02779 954 aa8.25□□□□□ -1.09
ITGB1-214ENST00000488427 GPAT2Q6NUI2 795 aa8.25□□□□□ -1.09
ITGB1-214ENST00000488427 FOXR1Q6PIV2 292 aa8.25□□□□□ -1.09
ITGB1-214ENST00000488427 SLC9A9Q8IVB4 645 aa8.25□□□□□ -1.09
ITGB1-214ENST00000488427 TNS4Q8IZW8 715 aa8.25□□□□□ -1.09
ITGB1-214ENST00000488427 TSEN2Q8NCE0 465 aaKnown RBP8.25□□□□□ -1.09
ITGB1-214ENST00000488427 ZNF232Q9UNY5 417 aa8.25□□□□□ -1.09
ITGB1-214ENST00000488427 SERTM1A2A2V5 107 aa8.24□□□□□ -1.09
ITGB1-214ENST00000488427 PPP1R12BO60237 982 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-214ENST00000488427 STAU1O95793 577 aaKnown RBP8.24□□□□□ -1.09
ITGB1-214ENST00000488427 RHOQP17081 205 aa8.24□□□□□ -1.09
ITGB1-214ENST00000488427 FOXK2Q01167 660 aa8.24□□□□□ -1.09
ITGB1-214ENST00000488427 SRSF11Q05519 484 aaKnown RBP8.24□□□□□ -1.09
ITGB1-214ENST00000488427 LBRQ14739 615 aaKnown RBP8.24□□□□□ -1.09
ITGB1-214ENST00000488427 TEAD4Q15561 434 aa8.24□□□□□ -1.09
ITGB1-214ENST00000488427 HIF1AQ16665 826 aa8.24□□□□□ -1.09
ITGB1-214ENST00000488427 C4orf17Q53FE4 359 aa8.24□□□□□ -1.09
ITGB1-214ENST00000488427 STAG2Q8N3U4 1231 aa8.24□□□□□ -1.09
ITGB1-214ENST00000488427 ARXQ96QS3 562 aa8.24□□□□□ -1.09
ITGB1-214ENST00000488427 ZDHHC3Q9NYG2 299 aa8.24□□□□□ -1.09
ITGB1-214ENST00000488427 USTQ9Y2C2 406 aa8.24□□□□□ -1.09
ITGB1-214ENST00000488427 GPC6Q9Y625 555 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-214ENST00000488427 DKK1O94907 266 aa8.23□□□□□ -1.09
ITGB1-214ENST00000488427 F11P03951 625 aa8.23□□□□□ -1.09
ITGB1-214ENST00000488427 IGFBP4P22692 258 aa8.23□□□□□ -1.09
ITGB1-214ENST00000488427 PLA2G4AP47712 749 aa8.23□□□□□ -1.09
ITGB1-214ENST00000488427 EPHA4P54764 986 aa8.23□□□□□ -1.09
ITGB1-214ENST00000488427 FOXO3O43524 673 aa8.22□□□□□ -1.09
ITGB1-214ENST00000488427 EFHC2Q5JST6 749 aa8.22□□□□□ -1.09
ITGB1-214ENST00000488427 AIDAQ96BJ3 306 aa8.22□□□□□ -1.09
ITGB1-214ENST00000488427 IQSEC3Q9UPP2 1182 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-214ENST00000488427 PHKA2P46019 1235 aa8.21□□□□□ -1.1
ITGB1-214ENST00000488427 HIRAP54198 1017 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-214ENST00000488427 LYPD4Q6UWN0 246 aa8.21□□□□□ -1.1
ITGB1-214ENST00000488427 RIPOR1Q6ZS17 1223 aa8.21□□□□□ -1.1
ITGB1-214ENST00000488427 SCG3Q8WXD2 468 aaKnown RBP8.21□□□□□ -1.1
ITGB1-214ENST00000488427 GAS2L1Q99501 681 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-214ENST00000488427 TSPAN10Q9H1Z9 355 aaPredicted RBP8.21□□□□□ -1.1
ITGB1-214ENST00000488427 NEUROD4Q9HD90 331 aa8.21□□□□□ -1.1
ITGB1-214ENST00000488427 ENAMQ9NRM1 1142 aa8.21□□□□□ -1.1
ITGB1-214ENST00000488427 ZMIZ1Q9ULJ6 1067 aa8.21□□□□□ -1.1
ITGB1-214ENST00000488427 MTMR7Q9Y216 660 aa8.21□□□□□ -1.1
ITGB1-214ENST00000488427 ATAD2Q6PL18 1390 aa8.21□□□□□ -1.1
ITGB1-214ENST00000488427 NOS2P35228 1153 aa8.2□□□□□ -1.1
ITGB1-214ENST00000488427 TMEM164Q5U3C3 297 aa8.2□□□□□ -1.1
ITGB1-214ENST00000488427 FIGNL1Q6PIW4 674 aa8.2□□□□□ -1.1
ITGB1-214ENST00000488427 CLP1Q92989 425 aaKnown RBP8.2□□□□□ -1.1
ITGB1-214ENST00000488427 L3MBTL2Q969R5 705 aa8.2□□□□□ -1.1
ITGB1-214ENST00000488427 GJA3Q9Y6H8 435 aa8.2□□□□□ -1.1
ITGB1-214ENST00000488427 CELA2BP08218 269 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-214ENST00000488427 GAS6Q14393 721 aa8.19□□□□□ -1.1
ITGB1-214ENST00000488427 C1orf53Q5VUE5 145 aa8.19□□□□□ -1.1
ITGB1-214ENST00000488427 BICDL1Q6ZP65 573 aa8.19□□□□□ -1.1
ITGB1-214ENST00000488427 TRIM22Q8IYM9 498 aa8.19□□□□□ -1.1
ITGB1-214ENST00000488427 STK32AQ8WU08 396 aa8.19□□□□□ -1.1
ITGB1-214ENST00000488427 CHMP7Q8WUX9 453 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-214ENST00000488427 TRERF1Q96PN7 1200 aa8.19□□□□□ -1.1
ITGB1-214ENST00000488427 CUEDC1Q9NWM3 386 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-214ENST00000488427 PHF24Q9UPV7 400 aa8.19□□□□□ -1.1
ITGB1-214ENST00000488427 MSX1P28360 303 aa8.18□□□□□ -1.1
ITGB1-214ENST00000488427 WEE1P30291 646 aa8.18□□□□□ -1.1
ITGB1-214ENST00000488427 ARSJQ5FYB0 599 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms