RNA–Protein interactions for RNA: ENST00000488293.4

MECP2-210, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-210ENST00000488293 PARP3Q9Y6F1 533 aa17.71■□□□□ 0.43
MECP2-210ENST00000488293 ZPR1O75312 459 aa17.7■□□□□ 0.42
MECP2-210ENST00000488293 FKBP8Q14318 412 aa17.7■□□□□ 0.42
MECP2-210ENST00000488293 PNNQ9H307 717 aaKnown RBP17.7■□□□□ 0.42
MECP2-210ENST00000488293 ZBTB1Q9Y2K1 713 aa17.7■□□□□ 0.42
MECP2-210ENST00000488293 COL15A1P39059 1388 aa17.69■□□□□ 0.42
MECP2-210ENST00000488293 TGFB2P61812 414 aa17.69■□□□□ 0.42
MECP2-210ENST00000488293 MCM10Q7L590 875 aa17.69■□□□□ 0.42
MECP2-210ENST00000488293 NARFQ9UHQ1 456 aa17.69■□□□□ 0.42
MECP2-210ENST00000488293 C10orf71Q711Q0 1435 aa17.69■□□□□ 0.42
MECP2-210ENST00000488293 BRCA1P38398 1863 aaKnown RBP17.68■□□□□ 0.42
MECP2-210ENST00000488293 USPL1Q5W0Q7 1092 aa17.68■□□□□ 0.42
MECP2-210ENST00000488293 PLEKHF1Q96S99 279 aa17.68■□□□□ 0.42
MECP2-210ENST00000488293 CANXP27824 592 aaKnown RBP17.67■□□□□ 0.42
MECP2-210ENST00000488293 TM4SF1P30408 202 aa17.67■□□□□ 0.42
MECP2-210ENST00000488293 EIF5P55010 431 aaKnown RBP17.67■□□□□ 0.42
MECP2-210ENST00000488293 AFDNP55196 1824 aaKnown RBP17.67■□□□□ 0.42
MECP2-210ENST00000488293 A0A087WZG4 1122 aa17.66■□□□□ 0.42
MECP2-210ENST00000488293 KCNQ3O43525 872 aa17.66■□□□□ 0.42
MECP2-210ENST00000488293 ZNF784Q8NCA9 323 aaPredicted RBP17.66■□□□□ 0.42
MECP2-210ENST00000488293 PXDNLA1KZ92 1463 aa17.66■□□□□ 0.42
MECP2-210ENST00000488293 MYBBP1AQ9BQG0 1328 aaKnown RBP17.66■□□□□ 0.42
MECP2-210ENST00000488293 DDR1Q08345 913 aa17.65■□□□□ 0.42
MECP2-210ENST00000488293 DCTN1Q14203 1278 aa17.65■□□□□ 0.42
MECP2-210ENST00000488293 MAPK8IP3Q9UPT6 1336 aa17.65■□□□□ 0.42
MECP2-210ENST00000488293 NRXN2Q9P2S2 1712 aa17.64■□□□□ 0.41
MECP2-210ENST00000488293 KDM3BQ7LBC6 1761 aa17.64■□□□□ 0.41
MECP2-210ENST00000488293 IL6STP40189 918 aaPredicted RBP17.64■□□□□ 0.41
MECP2-210ENST00000488293 TAF7Q15545 349 aaPredicted RBP17.64■□□□□ 0.41
MECP2-210ENST00000488293 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
MECP2-210ENST00000488293 A0A0G2JLW4 131 aa17.63■□□□□ 0.41
MECP2-210ENST00000488293 POLRMTO00411 1230 aaKnown RBP17.63■□□□□ 0.41
MECP2-210ENST00000488293 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
MECP2-210ENST00000488293 SCN7AQ01118 1682 aa17.63■□□□□ 0.41
MECP2-210ENST00000488293 ARFGEF1Q9Y6D6 1849 aa17.63■□□□□ 0.41
MECP2-210ENST00000488293 A1BGP04217 495 aa17.62■□□□□ 0.41
MECP2-210ENST00000488293 SNRPA1P09661 255 aaKnown RBP17.62■□□□□ 0.41
MECP2-210ENST00000488293 BCL2L12Q9HB09 334 aa17.62■□□□□ 0.41
MECP2-210ENST00000488293 DPEP1P16444 411 aa17.61■□□□□ 0.41
MECP2-210ENST00000488293 NFIXQ14938 502 aa17.61■□□□□ 0.41
MECP2-210ENST00000488293 NPM2Q86SE8 214 aaKnown RBP17.61■□□□□ 0.41
MECP2-210ENST00000488293 PNISRQ8TF01 805 aaKnown RBP17.61■□□□□ 0.41
MECP2-210ENST00000488293 WWC3Q9ULE0 1092 aa17.61■□□□□ 0.41
MECP2-210ENST00000488293 USP16Q9Y5T5 823 aa17.61■□□□□ 0.41
MECP2-210ENST00000488293 LAMB4A4D0S4 1761 aa17.61■□□□□ 0.41
MECP2-210ENST00000488293 BCORQ6W2J9 1755 aa17.6■□□□□ 0.41
MECP2-210ENST00000488293 PRAMEF22A3QJZ6 481 aa17.58■□□□□ 0.4
MECP2-210ENST00000488293 KCNA3P22001 575 aa17.58■□□□□ 0.4
MECP2-210ENST00000488293 PIM2Q9P1W9 311 aa17.58■□□□□ 0.4
MECP2-210ENST00000488293 TBC1D2BQ9UPU7 963 aa17.58■□□□□ 0.4
MECP2-210ENST00000488293 BCS1LQ9Y276 419 aa17.58■□□□□ 0.4
MECP2-210ENST00000488293 ZNF330Q9Y3S2 320 aaPredicted RBP17.58■□□□□ 0.4
MECP2-210ENST00000488293 DLEC1Q9Y238 1755 aa17.58■□□□□ 0.4
MECP2-210ENST00000488293 SERPINB2P05120 415 aa17.57■□□□□ 0.4
MECP2-210ENST00000488293 PRKRIP1Q9H875 184 aaPredicted RBP17.57■□□□□ 0.4
MECP2-210ENST00000488293 MIS18AQ9NYP9 233 aa17.57■□□□□ 0.4
MECP2-210ENST00000488293 RIPK4P57078 832 aa17.56■□□□□ 0.4
MECP2-210ENST00000488293 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
MECP2-210ENST00000488293 DZIP3Q86Y13 1208 aaKnown RBP17.55■□□□□ 0.4
MECP2-210ENST00000488293 THUMPD2Q9BTF0 503 aaKnown RBP17.55■□□□□ 0.4
MECP2-210ENST00000488293 ANKRD31Q8N7Z5 1873 aa17.54■□□□□ 0.4
MECP2-210ENST00000488293 CAMTA2O94983 1202 aa17.54■□□□□ 0.4
MECP2-210ENST00000488293 TMPOP42166 694 aaKnown RBP17.54■□□□□ 0.4
MECP2-210ENST00000488293 LMOD3Q0VAK6 560 aa17.54■□□□□ 0.4
MECP2-210ENST00000488293 DALRD3Q5D0E6 543 aaKnown RBP17.54■□□□□ 0.4
MECP2-210ENST00000488293 TBC1D9BQ66K14 1250 aa17.54■□□□□ 0.4
MECP2-210ENST00000488293 BICDL1Q6ZP65 573 aa17.54■□□□□ 0.4
MECP2-210ENST00000488293 NBPF26B4DH59 902 aa17.53■□□□□ 0.4
MECP2-210ENST00000488293 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
MECP2-210ENST00000488293 CHRNA5P30532 468 aa17.53■□□□□ 0.4
MECP2-210ENST00000488293 PIP4K2AP48426 406 aaPredicted RBP17.53■□□□□ 0.4
MECP2-210ENST00000488293 EIF4A1P60842 406 aaKnown RBP17.53■□□□□ 0.4
MECP2-210ENST00000488293 NBPF10Q6P3W6 841 aaKnown RBP17.53■□□□□ 0.4
MECP2-210ENST00000488293 CLEC4GQ6UXB4 293 aa17.53■□□□□ 0.4
MECP2-210ENST00000488293 NBPF15Q8N660 670 aa17.53■□□□□ 0.4
MECP2-210ENST00000488293 ATP10DQ9P241 1426 aa17.53■□□□□ 0.4
MECP2-210ENST00000488293 ADCY9O60503 1353 aa17.53■□□□□ 0.4
MECP2-210ENST00000488293 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
MECP2-210ENST00000488293 RGL2O15211 777 aa17.52■□□□□ 0.4
MECP2-210ENST00000488293 ARHGAP27Q6ZUM4 889 aa17.52■□□□□ 0.4
MECP2-210ENST00000488293 RUNDC1Q96C34 613 aa17.52■□□□□ 0.4
MECP2-210ENST00000488293 SETDB2Q96T68 719 aa17.52■□□□□ 0.4
MECP2-210ENST00000488293 BABAM1Q9NWV8 329 aa17.52■□□□□ 0.4
MECP2-210ENST00000488293 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
MECP2-210ENST00000488293 ZNF652Q9Y2D9 606 aa17.51■□□□□ 0.39
MECP2-210ENST00000488293 SBF1O95248 1867 aa17.5■□□□□ 0.39
MECP2-210ENST00000488293 NUP98P52948 1817 aa17.5■□□□□ 0.39
MECP2-210ENST00000488293 CCDC146Q8IYE0 955 aa17.5■□□□□ 0.39
MECP2-210ENST00000488293 ADAMTS8Q9UP79 889 aa17.5■□□□□ 0.39
MECP2-210ENST00000488293 H0YIN7 160 aa17.49■□□□□ 0.39
MECP2-210ENST00000488293 PRR5LQ6MZQ0 368 aa17.49■□□□□ 0.39
MECP2-210ENST00000488293 C2CD5Q86YS7 1000 aa17.49■□□□□ 0.39
MECP2-210ENST00000488293 BRIP1Q9BX63 1249 aa17.49■□□□□ 0.39
MECP2-210ENST00000488293 TSPYL4Q9UJ04 414 aa17.49■□□□□ 0.39
MECP2-210ENST00000488293 PDE6BP35913 854 aa17.48■□□□□ 0.39
MECP2-210ENST00000488293 COL11A2P13942 1736 aaPredicted RBP17.47■□□□□ 0.39
MECP2-210ENST00000488293 NEUROD2Q15784 382 aa17.47■□□□□ 0.39
MECP2-210ENST00000488293 TTLL6Q8N841 843 aa17.47■□□□□ 0.39
MECP2-210ENST00000488293 CNBD1Q8NA66 436 aa17.47■□□□□ 0.39
MECP2-210ENST00000488293 GPBP1L1Q9HC44 474 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms