RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 EIF5P55010 431 aaKnown RBP20.55■□□□□ 0.88
TRIM50-203ENST00000488217 ZNF496Q96IT1 587 aaPredicted RBP20.55■□□□□ 0.88
TRIM50-203ENST00000488217 BCL2L12Q9HB09 334 aa20.55■□□□□ 0.88
TRIM50-203ENST00000488217 NUDCQ9Y266 331 aa20.55■□□□□ 0.88
TRIM50-203ENST00000488217 MYH14Q7Z406 1995 aaKnown RBP20.54■□□□□ 0.88
TRIM50-203ENST00000488217 A0A087WZG4 1122 aa20.54■□□□□ 0.88
TRIM50-203ENST00000488217 SERPINB2P05120 415 aa20.54■□□□□ 0.88
TRIM50-203ENST00000488217 CEP350Q5VT06 3117 aa20.53■□□□□ 0.88
TRIM50-203ENST00000488217 HSPA6P17066 643 aa20.53■□□□□ 0.88
TRIM50-203ENST00000488217 C9orf131Q5VYM1 1079 aa20.53■□□□□ 0.88
TRIM50-203ENST00000488217 PRKAR2BP31323 418 aa20.52■□□□□ 0.88
TRIM50-203ENST00000488217 RSPH6AQ9H0K4 717 aa20.52■□□□□ 0.88
TRIM50-203ENST00000488217 COL5A3P25940 1745 aaPredicted RBP20.52■□□□□ 0.88
TRIM50-203ENST00000488217 COL15A1P39059 1388 aa20.51■□□□□ 0.87
TRIM50-203ENST00000488217 C4AP0C0L4 1744 aa20.51■□□□□ 0.87
TRIM50-203ENST00000488217 BTBD11A6QL63 1104 aa20.51■□□□□ 0.87
TRIM50-203ENST00000488217 PPP2R1AP30153 589 aa20.51■□□□□ 0.87
TRIM50-203ENST00000488217 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
TRIM50-203ENST00000488217 MRC1P22897 1456 aa20.5■□□□□ 0.87
TRIM50-203ENST00000488217 U2AF1L5P0DN76 240 aaPredicted RBP20.5■□□□□ 0.87
TRIM50-203ENST00000488217 U2AF1Q01081 240 aaKnown RBP eCLIP20.5■□□□□ 0.87
TRIM50-203ENST00000488217 HEG1Q9ULI3 1381 aa20.49■□□□□ 0.87
TRIM50-203ENST00000488217 TOMM70O94826 608 aa20.49■□□□□ 0.87
TRIM50-203ENST00000488217 IL6STP40189 918 aaPredicted RBP20.49■□□□□ 0.87
TRIM50-203ENST00000488217 BICDL1Q6ZP65 573 aa20.49■□□□□ 0.87
TRIM50-203ENST00000488217 COL3A1P02461 1466 aaPredicted RBP20.49■□□□□ 0.87
TRIM50-203ENST00000488217 SCN11AQ9UI33 1791 aa20.49■□□□□ 0.87
TRIM50-203ENST00000488217 KCPQ6ZWJ8 1503 aa20.48■□□□□ 0.87
TRIM50-203ENST00000488217 KCNQ3O43525 872 aa20.48■□□□□ 0.87
TRIM50-203ENST00000488217 TBC1D2BQ9UPU7 963 aa20.48■□□□□ 0.87
TRIM50-203ENST00000488217 H0YIN7 160 aa20.47■□□□□ 0.87
TRIM50-203ENST00000488217 A1BGP04217 495 aa20.47■□□□□ 0.87
TRIM50-203ENST00000488217 NPM2Q86SE8 214 aaKnown RBP20.47■□□□□ 0.87
TRIM50-203ENST00000488217 C2CD5Q86YS7 1000 aa20.47■□□□□ 0.87
TRIM50-203ENST00000488217 RTF1Q92541 710 aaKnown RBP20.47■□□□□ 0.87
TRIM50-203ENST00000488217 NMRK2Q9NPI5 230 aa20.47■□□□□ 0.87
TRIM50-203ENST00000488217 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
TRIM50-203ENST00000488217 TBC1D9BQ66K14 1250 aa20.46■□□□□ 0.87
TRIM50-203ENST00000488217 TTLL6Q8N841 843 aa20.46■□□□□ 0.87
TRIM50-203ENST00000488217 RNF181Q9P0P0 153 aa20.46■□□□□ 0.87
TRIM50-203ENST00000488217 ZNF330Q9Y3S2 320 aaPredicted RBP20.46■□□□□ 0.87
TRIM50-203ENST00000488217 KIF13BQ9NQT8 1826 aa20.46■□□□□ 0.87
TRIM50-203ENST00000488217 TJP1Q07157 1748 aa20.45■□□□□ 0.86
TRIM50-203ENST00000488217 USP16Q9Y5T5 823 aa20.45■□□□□ 0.86
TRIM50-203ENST00000488217 N4BP2Q86UW6 1770 aaPredicted RBP20.44■□□□□ 0.86
TRIM50-203ENST00000488217 HTATSF1O43719 755 aaKnown RBP20.43■□□□□ 0.86
TRIM50-203ENST00000488217 MCM10Q7L590 875 aa20.43■□□□□ 0.86
TRIM50-203ENST00000488217 BRIP1Q9BX63 1249 aa20.43■□□□□ 0.86
TRIM50-203ENST00000488217 PDZRN3Q9UPQ7 1066 aa20.43■□□□□ 0.86
TRIM50-203ENST00000488217 KIAA1551Q9HCM1 1747 aa20.42■□□□□ 0.86
TRIM50-203ENST00000488217 SNRPA1P09661 255 aaKnown RBP20.42■□□□□ 0.86
TRIM50-203ENST00000488217 SETDB2Q96T68 719 aa20.42■□□□□ 0.86
TRIM50-203ENST00000488217 KDM2BQ8NHM5 1336 aa20.42■□□□□ 0.86
TRIM50-203ENST00000488217 PDE6BP35913 854 aa20.41■□□□□ 0.86
TRIM50-203ENST00000488217 RRAGCQ9HB90 399 aa20.41■□□□□ 0.86
TRIM50-203ENST00000488217 ADAMTS7Q9UKP4 1686 aa20.41■□□□□ 0.86
TRIM50-203ENST00000488217 CAMTA2O94983 1202 aa20.4■□□□□ 0.86
TRIM50-203ENST00000488217 LMNB1P20700 586 aa20.4■□□□□ 0.86
TRIM50-203ENST00000488217 APLP1P51693 650 aa20.4■□□□□ 0.86
TRIM50-203ENST00000488217 DCTN1Q14203 1278 aa20.4■□□□□ 0.86
TRIM50-203ENST00000488217 TAF7Q15545 349 aaPredicted RBP20.4■□□□□ 0.86
TRIM50-203ENST00000488217 C16orf71Q8IYS4 520 aaPredicted RBP20.4■□□□□ 0.86
TRIM50-203ENST00000488217 ZNF622Q969S3 477 aaKnown RBP eCLIP20.4■□□□□ 0.86
TRIM50-203ENST00000488217 PRR5LQ6MZQ0 368 aa20.39■□□□□ 0.85
TRIM50-203ENST00000488217 DZIP3Q86Y13 1208 aaKnown RBP20.39■□□□□ 0.85
TRIM50-203ENST00000488217 CCDC24Q8N4L8 307 aa20.39■□□□□ 0.85
TRIM50-203ENST00000488217 RBM46Q8TBY0 533 aaKnown RBP20.39■□□□□ 0.85
TRIM50-203ENST00000488217 PRAMEF22A3QJZ6 481 aa20.38■□□□□ 0.85
TRIM50-203ENST00000488217 RASSF7Q02833 373 aa20.37■□□□□ 0.85
TRIM50-203ENST00000488217 CLEC4GQ6UXB4 293 aa20.37■□□□□ 0.85
TRIM50-203ENST00000488217 NPHP1O15259 732 aa20.36■□□□□ 0.85
TRIM50-203ENST00000488217 NEFMP07197 916 aa20.36■□□□□ 0.85
TRIM50-203ENST00000488217 PIP4K2AP48426 406 aaPredicted RBP20.36■□□□□ 0.85
TRIM50-203ENST00000488217 PRELPP51888 382 aa20.36■□□□□ 0.85
TRIM50-203ENST00000488217 MIS18AQ9NYP9 233 aa20.36■□□□□ 0.85
TRIM50-203ENST00000488217 FSTL1Q12841 308 aa20.35■□□□□ 0.85
TRIM50-203ENST00000488217 DNAJC5GQ8N7S2 189 aa20.35■□□□□ 0.85
TRIM50-203ENST00000488217 CNBD1Q8NA66 436 aa20.35■□□□□ 0.85
TRIM50-203ENST00000488217 CARMIL3Q8ND23 1372 aa20.34■□□□□ 0.85
TRIM50-203ENST00000488217 ZC3H4Q9UPT8 1303 aaKnown RBP20.34■□□□□ 0.85
TRIM50-203ENST00000488217 GLTPD2A6NH11 291 aa20.34■□□□□ 0.85
TRIM50-203ENST00000488217 C21orf2O43822 256 aa20.34■□□□□ 0.85
TRIM50-203ENST00000488217 NBPF26B4DH59 902 aa20.33■□□□□ 0.85
TRIM50-203ENST00000488217 NFKBIEO00221 500 aa20.33■□□□□ 0.85
TRIM50-203ENST00000488217 ST5P78524 1137 aa20.33■□□□□ 0.85
TRIM50-203ENST00000488217 NBPF10Q6P3W6 841 aaKnown RBP20.33■□□□□ 0.85
TRIM50-203ENST00000488217 NBPF15Q8N660 670 aa20.33■□□□□ 0.85
TRIM50-203ENST00000488217 CNKSR1Q969H4 720 aa20.33■□□□□ 0.85
TRIM50-203ENST00000488217 ZNF219Q9P2Y4 722 aaPredicted RBP20.33■□□□□ 0.85
TRIM50-203ENST00000488217 VEGFAP15692 232 aaPredicted RBP20.32■□□□□ 0.84
TRIM50-203ENST00000488217 STYK1Q6J9G0 422 aa20.32■□□□□ 0.84
TRIM50-203ENST00000488217 ZNF652Q9Y2D9 606 aa20.32■□□□□ 0.84
TRIM50-203ENST00000488217 SRGNP10124 158 aa20.31■□□□□ 0.84
TRIM50-203ENST00000488217 TPTE2Q6XPS3 522 aa20.31■□□□□ 0.84
TRIM50-203ENST00000488217 NBPF5PQ86XG9 351 aaPredicted RBP20.31■□□□□ 0.84
TRIM50-203ENST00000488217 PNISRQ8TF01 805 aaKnown RBP20.31■□□□□ 0.84
TRIM50-203ENST00000488217 PLEKHF1Q96S99 279 aa20.31■□□□□ 0.84
TRIM50-203ENST00000488217 PNNQ9H307 717 aaKnown RBP20.31■□□□□ 0.84
TRIM50-203ENST00000488217 RGL2O15211 777 aa20.3■□□□□ 0.84
TRIM50-203ENST00000488217 DPY19L2Q6NUT2 758 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms