RNA–Protein interactions for RNA: ENST00000488215.5

RERE-214, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-214ENST00000488215 RALBP1Q15311 655 aa12.99□□□□□ -0.33
RERE-214ENST00000488215 PARP3Q9Y6F1 533 aa12.99□□□□□ -0.33
RERE-214ENST00000488215 PXDNLA1KZ92 1463 aa12.98□□□□□ -0.33
RERE-214ENST00000488215 MYBBP1AQ9BQG0 1328 aaKnown RBP12.98□□□□□ -0.33
RERE-214ENST00000488215 CANXP27824 592 aaKnown RBP12.98□□□□□ -0.33
RERE-214ENST00000488215 FKBP8Q14318 412 aa12.98□□□□□ -0.33
RERE-214ENST00000488215 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
RERE-214ENST00000488215 ZNF330Q9Y3S2 320 aaPredicted RBP12.98□□□□□ -0.33
RERE-214ENST00000488215 LAMB4A4D0S4 1761 aa12.97□□□□□ -0.33
RERE-214ENST00000488215 KCNQ3O43525 872 aa12.97□□□□□ -0.33
RERE-214ENST00000488215 ZPR1O75312 459 aa12.97□□□□□ -0.33
RERE-214ENST00000488215 STARD3NLO95772 234 aa12.97□□□□□ -0.33
RERE-214ENST00000488215 USPL1Q5W0Q7 1092 aa12.97□□□□□ -0.33
RERE-214ENST00000488215 KDM3BQ7LBC6 1761 aa12.97□□□□□ -0.33
RERE-214ENST00000488215 GRIN3BO60391 1043 aa12.96□□□□□ -0.33
RERE-214ENST00000488215 UTRNP46939 3433 aa12.95□□□□□ -0.34
RERE-214ENST00000488215 BCORQ6W2J9 1755 aa12.95□□□□□ -0.34
RERE-214ENST00000488215 DDR1Q08345 913 aa12.95□□□□□ -0.34
RERE-214ENST00000488215 PLEKHF1Q96S99 279 aa12.95□□□□□ -0.34
RERE-214ENST00000488215 AFDNP55196 1824 aaKnown RBP12.95□□□□□ -0.34
RERE-214ENST00000488215 BRCA1P38398 1863 aaKnown RBP12.94□□□□□ -0.34
RERE-214ENST00000488215 HTATSF1O43719 755 aaKnown RBP12.94□□□□□ -0.34
RERE-214ENST00000488215 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
RERE-214ENST00000488215 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
RERE-214ENST00000488215 TEX13AQ9BXU3 409 aaPredicted RBP12.94□□□□□ -0.34
RERE-214ENST00000488215 PNNQ9H307 717 aaKnown RBP12.94□□□□□ -0.34
RERE-214ENST00000488215 NARFQ9UHQ1 456 aa12.94□□□□□ -0.34
RERE-214ENST00000488215 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
RERE-214ENST00000488215 ZNF784Q8NCA9 323 aaPredicted RBP12.93□□□□□ -0.34
RERE-214ENST00000488215 THUMPD2Q9BTF0 503 aaKnown RBP12.93□□□□□ -0.34
RERE-214ENST00000488215 A0A087WZG4 1122 aa12.92□□□□□ -0.34
RERE-214ENST00000488215 A0A0G2JLW4 131 aa12.92□□□□□ -0.34
RERE-214ENST00000488215 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
RERE-214ENST00000488215 POLRMTO00411 1230 aaKnown RBP12.92□□□□□ -0.34
RERE-214ENST00000488215 A1BGP04217 495 aa12.92□□□□□ -0.34
RERE-214ENST00000488215 PIP4K2AP48426 406 aaPredicted RBP12.92□□□□□ -0.34
RERE-214ENST00000488215 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
RERE-214ENST00000488215 NRXN2Q9P2S2 1712 aa12.92□□□□□ -0.34
RERE-214ENST00000488215 DPEP1P16444 411 aa12.91□□□□□ -0.34
RERE-214ENST00000488215 IL6STP40189 918 aaPredicted RBP12.91□□□□□ -0.34
RERE-214ENST00000488215 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
RERE-214ENST00000488215 TGFB2P61812 414 aa12.91□□□□□ -0.34
RERE-214ENST00000488215 NFIXQ14938 502 aa12.91□□□□□ -0.34
RERE-214ENST00000488215 WDR43Q15061 677 aaKnown RBP eCLIP12.91□□□□□ -0.34
RERE-214ENST00000488215 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
RERE-214ENST00000488215 BICDL1Q6ZP65 573 aa12.91□□□□□ -0.34
RERE-214ENST00000488215 BCL2L12Q9HB09 334 aa12.91□□□□□ -0.34
RERE-214ENST00000488215 BCS1LQ9Y276 419 aa12.91□□□□□ -0.34
RERE-214ENST00000488215 GOLGB1Q14789 3259 aaKnown RBP12.91□□□□□ -0.34
RERE-214ENST00000488215 SNRPA1P09661 255 aaKnown RBP12.9□□□□□ -0.34
RERE-214ENST00000488215 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
RERE-214ENST00000488215 PRKRIP1Q9H875 184 aaPredicted RBP12.9□□□□□ -0.34
RERE-214ENST00000488215 TBC1D2BQ9UPU7 963 aa12.9□□□□□ -0.34
RERE-214ENST00000488215 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
RERE-214ENST00000488215 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
RERE-214ENST00000488215 TM4SF1P30408 202 aa12.89□□□□□ -0.35
RERE-214ENST00000488215 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
RERE-214ENST00000488215 RRP7AQ9Y3A4 280 aaKnown RBP12.89□□□□□ -0.35
RERE-214ENST00000488215 ARFGEF1Q9Y6D6 1849 aa12.89□□□□□ -0.35
RERE-214ENST00000488215 CARMIL3Q8ND23 1372 aa12.89□□□□□ -0.35
RERE-214ENST00000488215 SERPINB2P05120 415 aa12.88□□□□□ -0.35
RERE-214ENST00000488215 CHRNA5P30532 468 aa12.88□□□□□ -0.35
RERE-214ENST00000488215 RIPK4P57078 832 aa12.88□□□□□ -0.35
RERE-214ENST00000488215 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
RERE-214ENST00000488215 DZIP3Q86Y13 1208 aaKnown RBP12.88□□□□□ -0.35
RERE-214ENST00000488215 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
RERE-214ENST00000488215 ATP10DQ9P241 1426 aa12.88□□□□□ -0.35
RERE-214ENST00000488215 ANKRD31Q8N7Z5 1873 aa12.87□□□□□ -0.35
RERE-214ENST00000488215 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
RERE-214ENST00000488215 LMOD3Q0VAK6 560 aa12.87□□□□□ -0.35
RERE-214ENST00000488215 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
RERE-214ENST00000488215 TSPYL4Q9UJ04 414 aa12.87□□□□□ -0.35
RERE-214ENST00000488215 NPHP1O15259 732 aa12.86□□□□□ -0.35
RERE-214ENST00000488215 CAMTA2O94983 1202 aa12.86□□□□□ -0.35
RERE-214ENST00000488215 PIM2Q9P1W9 311 aa12.86□□□□□ -0.35
RERE-214ENST00000488215 ADCY9O60503 1353 aa12.85□□□□□ -0.35
RERE-214ENST00000488215 DALRD3Q5D0E6 543 aaKnown RBP12.85□□□□□ -0.35
RERE-214ENST00000488215 RUNDC1Q96C34 613 aa12.85□□□□□ -0.35
RERE-214ENST00000488215 CACNA1SQ13698 1873 aa12.85□□□□□ -0.35
RERE-214ENST00000488215 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
RERE-214ENST00000488215 KCNA3P22001 575 aa12.84□□□□□ -0.35
RERE-214ENST00000488215 EIF4A1P60842 406 aaKnown RBP12.84□□□□□ -0.35
RERE-214ENST00000488215 NBPF10Q6P3W6 841 aaKnown RBP12.84□□□□□ -0.35
RERE-214ENST00000488215 ARHGAP27Q6ZUM4 889 aa12.84□□□□□ -0.35
RERE-214ENST00000488215 CCDC24Q8N4L8 307 aa12.84□□□□□ -0.35
RERE-214ENST00000488215 NBPF15Q8N660 670 aa12.84□□□□□ -0.35
RERE-214ENST00000488215 ZNF526Q8TF50 670 aaPredicted RBP12.84□□□□□ -0.35
RERE-214ENST00000488215 ADAMTS8Q9UP79 889 aa12.84□□□□□ -0.35
RERE-214ENST00000488215 ZNF652Q9Y2D9 606 aa12.84□□□□□ -0.35
RERE-214ENST00000488215 GIGYF1O75420 1035 aaPredicted RBP12.83□□□□□ -0.36
RERE-214ENST00000488215 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
RERE-214ENST00000488215 NGEFQ8N5V2 710 aa12.83□□□□□ -0.36
RERE-214ENST00000488215 CNBD1Q8NA66 436 aa12.83□□□□□ -0.36
RERE-214ENST00000488215 SETDB2Q96T68 719 aa12.83□□□□□ -0.36
RERE-214ENST00000488215 MYL6BP14649 208 aa12.82□□□□□ -0.36
RERE-214ENST00000488215 PRR5LQ6MZQ0 368 aa12.82□□□□□ -0.36
RERE-214ENST00000488215 LAS1LQ9Y4W2 734 aaKnown RBP12.82□□□□□ -0.36
RERE-214ENST00000488215 ZNF316A6NFI3 1004 aaPredicted RBP12.81□□□□□ -0.36
RERE-214ENST00000488215 ST5P78524 1137 aa12.81□□□□□ -0.36
RERE-214ENST00000488215 GPBP1L1Q9HC44 474 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms