RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 DDR1Q08345 913 aa15.1■□□□□ 0.01
NIPAL3-207ENST00000488155 BCS1LQ9Y276 419 aa15.1■□□□□ 0.01
NIPAL3-207ENST00000488155 ARFGEF1Q9Y6D6 1849 aa15.1■□□□□ 0.01
NIPAL3-207ENST00000488155 C10orf71Q711Q0 1435 aa15.09■□□□□ 0.01
NIPAL3-207ENST00000488155 ZNF790Q6PG37 636 aa15.09■□□□□ 0.01
NIPAL3-207ENST00000488155 MCM10Q7L590 875 aa15.09■□□□□ 0.01
NIPAL3-207ENST00000488155 VSIG10Q8N0Z9 540 aa15.09■□□□□ 0.01
NIPAL3-207ENST00000488155 ZNF330Q9Y3S2 320 aaPredicted RBP15.09■□□□□ 0.01
NIPAL3-207ENST00000488155 CCDC88AQ3V6T2 1871 aa15.09■□□□□ 0.01
NIPAL3-207ENST00000488155 COL15A1P39059 1388 aa15.09■□□□□ 0.01
NIPAL3-207ENST00000488155 BTBD11A6QL63 1104 aa15.08■□□□□ 0
NIPAL3-207ENST00000488155 TGFB2P61812 414 aa15.08■□□□□ 0
NIPAL3-207ENST00000488155 DCTN1Q14203 1278 aa15.08■□□□□ 0
NIPAL3-207ENST00000488155 ZNF526Q8TF50 670 aaPredicted RBP15.08■□□□□ 0
NIPAL3-207ENST00000488155 HEG1Q9ULI3 1381 aa15.08■□□□□ 0
NIPAL3-207ENST00000488155 FCHSD2O94868 740 aa15.07■□□□□ 0
NIPAL3-207ENST00000488155 STARD3NLO95772 234 aa15.07■□□□□ 0
NIPAL3-207ENST00000488155 RTF1Q92541 710 aaKnown RBP15.07■□□□□ 0
NIPAL3-207ENST00000488155 NARFQ9UHQ1 456 aa15.07■□□□□ 0
NIPAL3-207ENST00000488155 ATP10DQ9P241 1426 aa15.07■□□□□ 0
NIPAL3-207ENST00000488155 SBF1O95248 1867 aa15.06■□□□□ 0
NIPAL3-207ENST00000488155 POLRMTO00411 1230 aaKnown RBP15.06■□□□□ 0
NIPAL3-207ENST00000488155 TM4SF1P30408 202 aa15.06■□□□□ 0
NIPAL3-207ENST00000488155 BICDL1Q6ZP65 573 aa15.06■□□□□ 0
NIPAL3-207ENST00000488155 FMNL2Q96PY5 1086 aa15.06■□□□□ 0
NIPAL3-207ENST00000488155 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
NIPAL3-207ENST00000488155 CACNA1SQ13698 1873 aa15.06■□□□□ 0
NIPAL3-207ENST00000488155 GIGYF1O75420 1035 aaPredicted RBP15.05■□□□□ -0
NIPAL3-207ENST00000488155 A1BGP04217 495 aa15.05■□□□□ -0
NIPAL3-207ENST00000488155 CHRNA5P30532 468 aa15.05■□□□□ -0
NIPAL3-207ENST00000488155 NFIXQ14938 502 aa15.05■□□□□ -0
NIPAL3-207ENST00000488155 ARHGAP27Q6ZUM4 889 aa15.05■□□□□ -0
NIPAL3-207ENST00000488155 BCL2L12Q9HB09 334 aa15.05■□□□□ -0
NIPAL3-207ENST00000488155 PRAMEF22A3QJZ6 481 aa15.04■□□□□ -0
NIPAL3-207ENST00000488155 PIP4K2AP48426 406 aaPredicted RBP15.04■□□□□ -0
NIPAL3-207ENST00000488155 EIF5P55010 431 aaKnown RBP15.04■□□□□ -0
NIPAL3-207ENST00000488155 C1QTNF8P60827 252 aa15.04■□□□□ -0
NIPAL3-207ENST00000488155 DDX10Q13206 875 aaKnown RBP15.04■□□□□ -0
NIPAL3-207ENST00000488155 TBC1D2BQ9UPU7 963 aa15.04■□□□□ -0
NIPAL3-207ENST00000488155 NRXN2Q9P2S2 1712 aa15.03■□□□□ -0
NIPAL3-207ENST00000488155 KCNA3P22001 575 aa15.03■□□□□ -0
NIPAL3-207ENST00000488155 TEX13AQ9BXU3 409 aaPredicted RBP15.03■□□□□ -0
NIPAL3-207ENST00000488155 USP16Q9Y5T5 823 aa15.03■□□□□ -0
NIPAL3-207ENST00000488155 ANKRD31Q8N7Z5 1873 aa15.03■□□□□ -0
NIPAL3-207ENST00000488155 SERPINB2P05120 415 aa15.02■□□□□ -0
NIPAL3-207ENST00000488155 NEFMP07197 916 aa15.02■□□□□ -0
NIPAL3-207ENST00000488155 MIS18AQ9NYP9 233 aa15.02■□□□□ -0
NIPAL3-207ENST00000488155 PIM2Q9P1W9 311 aa15.02■□□□□ -0
NIPAL3-207ENST00000488155 SCN7AQ01118 1682 aa15.02□□□□□ -0.01
NIPAL3-207ENST00000488155 DLEC1Q9Y238 1755 aa15.01□□□□□ -0.01
NIPAL3-207ENST00000488155 A0A087WZG4 1122 aa15.01□□□□□ -0.01
NIPAL3-207ENST00000488155 NPM2Q86SE8 214 aaKnown RBP15.01□□□□□ -0.01
NIPAL3-207ENST00000488155 GPBP1L1Q9HC44 474 aaPredicted RBP15.01□□□□□ -0.01
NIPAL3-207ENST00000488155 BCORQ6W2J9 1755 aa15.01□□□□□ -0.01
NIPAL3-207ENST00000488155 ADCY9O60503 1353 aa15□□□□□ -0.01
NIPAL3-207ENST00000488155 SENP3-EIF4A1A0A087X0R7 540 aa15□□□□□ -0.01
NIPAL3-207ENST00000488155 DALRD3Q5D0E6 543 aaKnown RBP15□□□□□ -0.01
NIPAL3-207ENST00000488155 TBC1D9BQ66K14 1250 aa15□□□□□ -0.01
NIPAL3-207ENST00000488155 CCDC24Q8N4L8 307 aa15□□□□□ -0.01
NIPAL3-207ENST00000488155 KDM3BQ7LBC6 1761 aa14.99□□□□□ -0.01
NIPAL3-207ENST00000488155 IL6STP40189 918 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-207ENST00000488155 TAF7Q15545 349 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-207ENST00000488155 THUMPD2Q9BTF0 503 aaKnown RBP14.99□□□□□ -0.01
NIPAL3-207ENST00000488155 CARMIL3Q8ND23 1372 aa14.98□□□□□ -0.01
NIPAL3-207ENST00000488155 HTATSF1O43719 755 aaKnown RBP14.98□□□□□ -0.01
NIPAL3-207ENST00000488155 SNRPA1P09661 255 aaKnown RBP14.98□□□□□ -0.01
NIPAL3-207ENST00000488155 PLEKHF1Q96S99 279 aa14.98□□□□□ -0.01
NIPAL3-207ENST00000488155 NUP98P52948 1817 aa14.98□□□□□ -0.01
NIPAL3-207ENST00000488155 LAMB4A4D0S4 1761 aa14.98□□□□□ -0.01
NIPAL3-207ENST00000488155 MAPK8IP3Q9UPT6 1336 aa14.97□□□□□ -0.01
NIPAL3-207ENST00000488155 DZIP3Q86Y13 1208 aaKnown RBP14.97□□□□□ -0.01
NIPAL3-207ENST00000488155 CAMTA2O94983 1202 aa14.96□□□□□ -0.01
NIPAL3-207ENST00000488155 COL11A2P13942 1736 aaPredicted RBP14.96□□□□□ -0.01
NIPAL3-207ENST00000488155 RALBP1Q15311 655 aa14.96□□□□□ -0.01
NIPAL3-207ENST00000488155 NFE2L2Q16236 605 aa14.96□□□□□ -0.01
NIPAL3-207ENST00000488155 C2CD5Q86YS7 1000 aa14.96□□□□□ -0.01
NIPAL3-207ENST00000488155 NPHP1O15259 732 aa14.95□□□□□ -0.02
NIPAL3-207ENST00000488155 C9orf131Q5VYM1 1079 aa14.95□□□□□ -0.02
NIPAL3-207ENST00000488155 SLX4Q8IY92 1834 aa14.94□□□□□ -0.02
NIPAL3-207ENST00000488155 NBPF26B4DH59 902 aa14.94□□□□□ -0.02
NIPAL3-207ENST00000488155 PRR5LQ6MZQ0 368 aa14.94□□□□□ -0.02
NIPAL3-207ENST00000488155 NBPF10Q6P3W6 841 aaKnown RBP14.94□□□□□ -0.02
NIPAL3-207ENST00000488155 NGEFQ8N5V2 710 aa14.94□□□□□ -0.02
NIPAL3-207ENST00000488155 NBPF15Q8N660 670 aa14.94□□□□□ -0.02
NIPAL3-207ENST00000488155 ZNF622Q969S3 477 aaKnown RBP eCLIP14.94□□□□□ -0.02
NIPAL3-207ENST00000488155 SETDB2Q96T68 719 aa14.94□□□□□ -0.02
NIPAL3-207ENST00000488155 PNNQ9H307 717 aaKnown RBP14.94□□□□□ -0.02
NIPAL3-207ENST00000488155 H0YIN7 160 aa14.93□□□□□ -0.02
NIPAL3-207ENST00000488155 ZNF219Q9P2Y4 722 aaPredicted RBP14.93□□□□□ -0.02
NIPAL3-207ENST00000488155 DICER1Q9UPY3 1922 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-207ENST00000488155 FAM177BA6PVY3 158 aa14.92□□□□□ -0.02
NIPAL3-207ENST00000488155 RIPK4P57078 832 aa14.92□□□□□ -0.02
NIPAL3-207ENST00000488155 RASSF7Q02833 373 aa14.92□□□□□ -0.02
NIPAL3-207ENST00000488155 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
NIPAL3-207ENST00000488155 TTLL6Q8N841 843 aa14.92□□□□□ -0.02
NIPAL3-207ENST00000488155 RNF181Q9P0P0 153 aa14.92□□□□□ -0.02
NIPAL3-207ENST00000488155 RRP7AQ9Y3A4 280 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-207ENST00000488155 MYBBP1AQ9BQG0 1328 aaKnown RBP14.92□□□□□ -0.02
NIPAL3-207ENST00000488155 FER1L6Q2WGJ9 1857 aa14.91□□□□□ -0.02
NIPAL3-207ENST00000488155 KIF3CO14782 793 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms