RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 COL3A1P02461 1466 aaPredicted RBP16.41■□□□□ 0.22
OPTN-212ENST00000487935 COL15A1P39059 1388 aa16.4■□□□□ 0.22
OPTN-212ENST00000487935 HSPA6P17066 643 aa16.4■□□□□ 0.22
OPTN-212ENST00000487935 DALRD3Q5D0E6 543 aaKnown RBP16.4■□□□□ 0.22
OPTN-212ENST00000487935 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
OPTN-212ENST00000487935 GAS2L2Q8NHY3 880 aa16.4■□□□□ 0.22
OPTN-212ENST00000487935 ZBTB1Q9Y2K1 713 aa16.4■□□□□ 0.22
OPTN-212ENST00000487935 CEP350Q5VT06 3117 aa16.39■□□□□ 0.21
OPTN-212ENST00000487935 UBR2Q8IWV8 1755 aa16.39■□□□□ 0.21
OPTN-212ENST00000487935 TEFQ10587 303 aa16.39■□□□□ 0.21
OPTN-212ENST00000487935 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
OPTN-212ENST00000487935 CHRNA5P30532 468 aa16.38■□□□□ 0.21
OPTN-212ENST00000487935 STARD3NLO95772 234 aa16.37■□□□□ 0.21
OPTN-212ENST00000487935 CANXP27824 592 aaKnown RBP16.37■□□□□ 0.21
OPTN-212ENST00000487935 NFIXQ14938 502 aa16.37■□□□□ 0.21
OPTN-212ENST00000487935 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
OPTN-212ENST00000487935 IL17REQ8NFR9 667 aa16.37■□□□□ 0.21
OPTN-212ENST00000487935 AFDNP55196 1824 aaKnown RBP16.36■□□□□ 0.21
OPTN-212ENST00000487935 CFAP53Q96M91 514 aa16.36■□□□□ 0.21
OPTN-212ENST00000487935 A0A087WZG4 1122 aa16.35■□□□□ 0.21
OPTN-212ENST00000487935 SERPINB2P05120 415 aa16.35■□□□□ 0.21
OPTN-212ENST00000487935 ZNF790Q6PG37 636 aa16.35■□□□□ 0.21
OPTN-212ENST00000487935 TEX13AQ9BXU3 409 aaPredicted RBP16.35■□□□□ 0.21
OPTN-212ENST00000487935 BCL2L12Q9HB09 334 aa16.35■□□□□ 0.21
OPTN-212ENST00000487935 NRXN2Q9P2S2 1712 aa16.35■□□□□ 0.21
OPTN-212ENST00000487935 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
OPTN-212ENST00000487935 SIPA1L3O60292 1781 aaPredicted RBP16.34■□□□□ 0.21
OPTN-212ENST00000487935 TOMM70O94826 608 aa16.34■□□□□ 0.21
OPTN-212ENST00000487935 EIF5P55010 431 aaKnown RBP16.34■□□□□ 0.21
OPTN-212ENST00000487935 ZNF496Q96IT1 587 aaPredicted RBP16.34■□□□□ 0.21
OPTN-212ENST00000487935 ZNF316A6NFI3 1004 aaPredicted RBP16.33■□□□□ 0.2
OPTN-212ENST00000487935 NMRK2Q9NPI5 230 aa16.33■□□□□ 0.2
OPTN-212ENST00000487935 RNF181Q9P0P0 153 aa16.33■□□□□ 0.2
OPTN-212ENST00000487935 NUDCQ9Y266 331 aa16.33■□□□□ 0.2
OPTN-212ENST00000487935 PRKAR2BP31323 418 aa16.32■□□□□ 0.2
OPTN-212ENST00000487935 FMNL2Q96PY5 1086 aa16.32■□□□□ 0.2
OPTN-212ENST00000487935 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
OPTN-212ENST00000487935 KDM2BQ8NHM5 1336 aa16.31■□□□□ 0.2
OPTN-212ENST00000487935 IL6STP40189 918 aaPredicted RBP16.31■□□□□ 0.2
OPTN-212ENST00000487935 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
OPTN-212ENST00000487935 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
OPTN-212ENST00000487935 RSPH6AQ9H0K4 717 aa16.31■□□□□ 0.2
OPTN-212ENST00000487935 SBF1O95248 1867 aa16.31■□□□□ 0.2
OPTN-212ENST00000487935 DLEC1Q9Y238 1755 aa16.31■□□□□ 0.2
OPTN-212ENST00000487935 BTBD11A6QL63 1104 aa16.3■□□□□ 0.2
OPTN-212ENST00000487935 H0YIN7 160 aa16.3■□□□□ 0.2
OPTN-212ENST00000487935 APLP1P51693 650 aa16.3■□□□□ 0.2
OPTN-212ENST00000487935 NPM2Q86SE8 214 aaKnown RBP16.3■□□□□ 0.2
OPTN-212ENST00000487935 C2CD5Q86YS7 1000 aa16.3■□□□□ 0.2
OPTN-212ENST00000487935 C16orf71Q8IYS4 520 aaPredicted RBP16.3■□□□□ 0.2
OPTN-212ENST00000487935 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
OPTN-212ENST00000487935 TBC1D9BQ66K14 1250 aa16.29■□□□□ 0.2
OPTN-212ENST00000487935 TTLL6Q8N841 843 aa16.29■□□□□ 0.2
OPTN-212ENST00000487935 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
OPTN-212ENST00000487935 SCN7AQ01118 1682 aa16.28■□□□□ 0.2
OPTN-212ENST00000487935 A1BGP04217 495 aa16.28■□□□□ 0.2
OPTN-212ENST00000487935 U2AF1L5P0DN76 240 aaPredicted RBP16.28■□□□□ 0.2
OPTN-212ENST00000487935 PPP2R1AP30153 589 aa16.28■□□□□ 0.2
OPTN-212ENST00000487935 U2AF1Q01081 240 aaKnown RBP eCLIP16.28■□□□□ 0.2
OPTN-212ENST00000487935 RASSF7Q02833 373 aa16.28■□□□□ 0.2
OPTN-212ENST00000487935 RBM46Q8TBY0 533 aaKnown RBP16.28■□□□□ 0.2
OPTN-212ENST00000487935 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
OPTN-212ENST00000487935 CARMIL3Q8ND23 1372 aa16.27■□□□□ 0.2
OPTN-212ENST00000487935 KCNQ3O43525 872 aa16.27■□□□□ 0.2
OPTN-212ENST00000487935 PDZRN3Q9UPQ7 1066 aa16.27■□□□□ 0.2
OPTN-212ENST00000487935 ZC3H4Q9UPT8 1303 aaKnown RBP16.26■□□□□ 0.19
OPTN-212ENST00000487935 LMNB1P20700 586 aa16.26■□□□□ 0.19
OPTN-212ENST00000487935 BRIP1Q9BX63 1249 aa16.26■□□□□ 0.19
OPTN-212ENST00000487935 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
OPTN-212ENST00000487935 TNRC6CQ9HCJ0 1690 aaKnown RBP16.25■□□□□ 0.19
OPTN-212ENST00000487935 PDE6BP35913 854 aa16.25■□□□□ 0.19
OPTN-212ENST00000487935 SETDB2Q96T68 719 aa16.25■□□□□ 0.19
OPTN-212ENST00000487935 ANKRD31Q8N7Z5 1873 aa16.25■□□□□ 0.19
OPTN-212ENST00000487935 CAMTA2O94983 1202 aa16.24■□□□□ 0.19
OPTN-212ENST00000487935 FSTL1Q12841 308 aa16.24■□□□□ 0.19
OPTN-212ENST00000487935 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
OPTN-212ENST00000487935 PRR5LQ6MZQ0 368 aa16.24■□□□□ 0.19
OPTN-212ENST00000487935 MCM10Q7L590 875 aa16.24■□□□□ 0.19
OPTN-212ENST00000487935 DZIP3Q86Y13 1208 aaKnown RBP16.24■□□□□ 0.19
OPTN-212ENST00000487935 ZNF622Q969S3 477 aaKnown RBP eCLIP16.24■□□□□ 0.19
OPTN-212ENST00000487935 USP16Q9Y5T5 823 aa16.24■□□□□ 0.19
OPTN-212ENST00000487935 NPHP1O15259 732 aa16.23■□□□□ 0.19
OPTN-212ENST00000487935 HTATSF1O43719 755 aaKnown RBP16.23■□□□□ 0.19
OPTN-212ENST00000487935 SNRPA1P09661 255 aaKnown RBP16.23■□□□□ 0.19
OPTN-212ENST00000487935 BCORQ6W2J9 1755 aa16.23■□□□□ 0.19
OPTN-212ENST00000487935 ST5P78524 1137 aa16.22■□□□□ 0.19
OPTN-212ENST00000487935 CCDC24Q8N4L8 307 aa16.22■□□□□ 0.19
OPTN-212ENST00000487935 CNBD1Q8NA66 436 aa16.22■□□□□ 0.19
OPTN-212ENST00000487935 CCDC88AQ3V6T2 1871 aa16.22■□□□□ 0.19
OPTN-212ENST00000487935 PRAMEF22A3QJZ6 481 aa16.21■□□□□ 0.19
OPTN-212ENST00000487935 GLTPD2A6NH11 291 aa16.21■□□□□ 0.19
OPTN-212ENST00000487935 NFKBIEO00221 500 aa16.21■□□□□ 0.19
OPTN-212ENST00000487935 PRELPP51888 382 aa16.21■□□□□ 0.19
OPTN-212ENST00000487935 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
OPTN-212ENST00000487935 IFFO2Q5TF58 517 aa16.21■□□□□ 0.19
OPTN-212ENST00000487935 DNAJC5GQ8N7S2 189 aa16.21■□□□□ 0.19
OPTN-212ENST00000487935 COL11A2P13942 1736 aaPredicted RBP16.2■□□□□ 0.18
OPTN-212ENST00000487935 TIAM2Q8IVF5 1701 aa16.2■□□□□ 0.18
OPTN-212ENST00000487935 WDR90Q96KV7 1748 aa16.2■□□□□ 0.18
OPTN-212ENST00000487935 C21orf2O43822 256 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms