RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 TTC5Q8N0Z6 440 aa27.1■■□□□ 1.93
TRIM8-204ENST00000487927 NUDCQ9Y266 331 aa27.1■■□□□ 1.93
TRIM8-204ENST00000487927 AFDNP55196 1824 aaKnown RBP27.09■■□□□ 1.93
TRIM8-204ENST00000487927 DPEP1P16444 411 aa27.09■■□□□ 1.93
TRIM8-204ENST00000487927 TM4SF1P30408 202 aa27.09■■□□□ 1.93
TRIM8-204ENST00000487927 C1QTNF8P60827 252 aa27.09■■□□□ 1.93
TRIM8-204ENST00000487927 ZNF790Q6PG37 636 aa27.09■■□□□ 1.93
TRIM8-204ENST00000487927 ZNF496Q96IT1 587 aaPredicted RBP27.09■■□□□ 1.93
TRIM8-204ENST00000487927 ZPR1O75312 459 aa27.08■■□□□ 1.93
TRIM8-204ENST00000487927 POLRMTO00411 1230 aaKnown RBP27.07■■□□□ 1.92
TRIM8-204ENST00000487927 U2AF1L5P0DN76 240 aaPredicted RBP27.07■■□□□ 1.92
TRIM8-204ENST00000487927 KCNA3P22001 575 aa27.07■■□□□ 1.92
TRIM8-204ENST00000487927 U2AF1Q01081 240 aaKnown RBP eCLIP27.07■■□□□ 1.92
TRIM8-204ENST00000487927 NARFQ9UHQ1 456 aa27.07■■□□□ 1.92
TRIM8-204ENST00000487927 HEG1Q9ULI3 1381 aa27.07■■□□□ 1.92
TRIM8-204ENST00000487927 ARFGEF1Q9Y6D6 1849 aa27.06■■□□□ 1.92
TRIM8-204ENST00000487927 GIGYF1O75420 1035 aaPredicted RBP27.06■■□□□ 1.92
TRIM8-204ENST00000487927 NRXN2Q9P2S2 1712 aa27.06■■□□□ 1.92
TRIM8-204ENST00000487927 BCS1LQ9Y276 419 aa27.05■■□□□ 1.92
TRIM8-204ENST00000487927 FCHSD2O94868 740 aa27.04■■□□□ 1.92
TRIM8-204ENST00000487927 CANXP27824 592 aaKnown RBP27.04■■□□□ 1.92
TRIM8-204ENST00000487927 BCL2L12Q9HB09 334 aa27.04■■□□□ 1.92
TRIM8-204ENST00000487927 KCNQ3O43525 872 aa27.02■■□□□ 1.92
TRIM8-204ENST00000487927 STARD3NLO95772 234 aa27.02■■□□□ 1.92
TRIM8-204ENST00000487927 EIF5P55010 431 aaKnown RBP27.02■■□□□ 1.92
TRIM8-204ENST00000487927 NFIXQ14938 502 aa27.02■■□□□ 1.92
TRIM8-204ENST00000487927 SCN7AQ01118 1682 aa27■■□□□ 1.91
TRIM8-204ENST00000487927 DLG5Q8TDM6 1919 aa27■■□□□ 1.91
TRIM8-204ENST00000487927 BTBD11A6QL63 1104 aa26.99■■□□□ 1.91
TRIM8-204ENST00000487927 MCM10Q7L590 875 aa26.99■■□□□ 1.91
TRIM8-204ENST00000487927 FMNL2Q96PY5 1086 aa26.99■■□□□ 1.91
TRIM8-204ENST00000487927 TEX13AQ9BXU3 409 aaPredicted RBP26.99■■□□□ 1.91
TRIM8-204ENST00000487927 CHRNA5P30532 468 aa26.97■■□□□ 1.91
TRIM8-204ENST00000487927 PIM2Q9P1W9 311 aa26.97■■□□□ 1.91
TRIM8-204ENST00000487927 DLEC1Q9Y238 1755 aa26.97■■□□□ 1.91
TRIM8-204ENST00000487927 ZNF526Q8TF50 670 aaPredicted RBP26.96■■□□□ 1.91
TRIM8-204ENST00000487927 GPBP1L1Q9HC44 474 aaPredicted RBP26.96■■□□□ 1.91
TRIM8-204ENST00000487927 A0A087WZG4 1122 aa26.95■■□□□ 1.9
TRIM8-204ENST00000487927 DCTN1Q14203 1278 aa26.95■■□□□ 1.9
TRIM8-204ENST00000487927 ARHGAP27Q6ZUM4 889 aa26.95■■□□□ 1.9
TRIM8-204ENST00000487927 RTF1Q92541 710 aaKnown RBP26.95■■□□□ 1.9
TRIM8-204ENST00000487927 SENP3-EIF4A1A0A087X0R7 540 aa26.94■■□□□ 1.9
TRIM8-204ENST00000487927 A1BGP04217 495 aa26.94■■□□□ 1.9
TRIM8-204ENST00000487927 SERPINB2P05120 415 aa26.94■■□□□ 1.9
TRIM8-204ENST00000487927 DDX10Q13206 875 aaKnown RBP26.94■■□□□ 1.9
TRIM8-204ENST00000487927 HTATSF1O43719 755 aaKnown RBP26.93■■□□□ 1.9
TRIM8-204ENST00000487927 IL6STP40189 918 aaPredicted RBP26.93■■□□□ 1.9
TRIM8-204ENST00000487927 BCORQ6W2J9 1755 aa26.93■■□□□ 1.9
TRIM8-204ENST00000487927 DALRD3Q5D0E6 543 aaKnown RBP26.92■■□□□ 1.9
TRIM8-204ENST00000487927 MIER1Q8N108 512 aa26.92■■□□□ 1.9
TRIM8-204ENST00000487927 TBC1D2BQ9UPU7 963 aa26.92■■□□□ 1.9
TRIM8-204ENST00000487927 USP16Q9Y5T5 823 aa26.92■■□□□ 1.9
TRIM8-204ENST00000487927 ANKRD31Q8N7Z5 1873 aa26.91■■□□□ 1.9
TRIM8-204ENST00000487927 PRAMEF22A3QJZ6 481 aa26.91■■□□□ 1.9
TRIM8-204ENST00000487927 ZNF330Q9Y3S2 320 aaPredicted RBP26.91■■□□□ 1.9
TRIM8-204ENST00000487927 CARMIL3Q8ND23 1372 aa26.91■■□□□ 1.9
TRIM8-204ENST00000487927 SBF1O95248 1867 aa26.9■■□□□ 1.9
TRIM8-204ENST00000487927 TBC1D9BQ66K14 1250 aa26.9■■□□□ 1.9
TRIM8-204ENST00000487927 BICDL1Q6ZP65 573 aa26.9■■□□□ 1.9
TRIM8-204ENST00000487927 PLEKHF1Q96S99 279 aa26.89■■□□□ 1.9
TRIM8-204ENST00000487927 KDM3BQ7LBC6 1761 aa26.87■■□□□ 1.89
TRIM8-204ENST00000487927 CAMTA2O94983 1202 aa26.87■■□□□ 1.89
TRIM8-204ENST00000487927 PIP4K2AP48426 406 aaPredicted RBP26.87■■□□□ 1.89
TRIM8-204ENST00000487927 SNRPA1P09661 255 aaKnown RBP26.86■■□□□ 1.89
TRIM8-204ENST00000487927 LAMB4A4D0S4 1761 aa26.86■■□□□ 1.89
TRIM8-204ENST00000487927 KIF3CO14782 793 aa26.85■■□□□ 1.89
TRIM8-204ENST00000487927 TAF7Q15545 349 aaPredicted RBP26.85■■□□□ 1.89
TRIM8-204ENST00000487927 C9orf131Q5VYM1 1079 aa26.84■■□□□ 1.89
TRIM8-204ENST00000487927 COL11A2P13942 1736 aaPredicted RBP26.84■■□□□ 1.89
TRIM8-204ENST00000487927 DZIP3Q86Y13 1208 aaKnown RBP26.83■■□□□ 1.89
TRIM8-204ENST00000487927 MIS18AQ9NYP9 233 aa26.83■■□□□ 1.89
TRIM8-204ENST00000487927 PRR5LQ6MZQ0 368 aa26.82■■□□□ 1.88
TRIM8-204ENST00000487927 C2CD5Q86YS7 1000 aa26.82■■□□□ 1.88
TRIM8-204ENST00000487927 NBPF26B4DH59 902 aa26.81■■□□□ 1.88
TRIM8-204ENST00000487927 NEFMP07197 916 aa26.81■■□□□ 1.88
TRIM8-204ENST00000487927 NFE2L2Q16236 605 aa26.81■■□□□ 1.88
TRIM8-204ENST00000487927 NBPF10Q6P3W6 841 aaKnown RBP26.81■■□□□ 1.88
TRIM8-204ENST00000487927 NPM2Q86SE8 214 aaKnown RBP26.81■■□□□ 1.88
TRIM8-204ENST00000487927 NBPF15Q8N660 670 aa26.81■■□□□ 1.88
TRIM8-204ENST00000487927 RALBP1Q15311 655 aa26.8■■□□□ 1.88
TRIM8-204ENST00000487927 ANP32CO43423 234 aa26.79■■□□□ 1.88
TRIM8-204ENST00000487927 CCDC24Q8N4L8 307 aa26.79■■□□□ 1.88
TRIM8-204ENST00000487927 H0YIN7 160 aa26.78■■□□□ 1.88
TRIM8-204ENST00000487927 TTLL6Q8N841 843 aa26.78■■□□□ 1.88
TRIM8-204ENST00000487927 THUMPD2Q9BTF0 503 aaKnown RBP26.78■■□□□ 1.88
TRIM8-204ENST00000487927 BRIP1Q9BX63 1249 aa26.78■■□□□ 1.88
TRIM8-204ENST00000487927 CCDC88AQ3V6T2 1871 aa26.78■■□□□ 1.88
TRIM8-204ENST00000487927 SETDB2Q96T68 719 aa26.77■■□□□ 1.88
TRIM8-204ENST00000487927 RNF181Q9P0P0 153 aa26.77■■□□□ 1.88
TRIM8-204ENST00000487927 RASSF7Q02833 373 aa26.76■■□□□ 1.87
TRIM8-204ENST00000487927 CACNA1SQ13698 1873 aa26.75■■□□□ 1.87
TRIM8-204ENST00000487927 MAPK8IP3Q9UPT6 1336 aa26.75■■□□□ 1.87
TRIM8-204ENST00000487927 CLEC4GQ6UXB4 293 aa26.75■■□□□ 1.87
TRIM8-204ENST00000487927 PNISRQ8TF01 805 aaKnown RBP26.75■■□□□ 1.87
TRIM8-204ENST00000487927 PNNQ9H307 717 aaKnown RBP26.75■■□□□ 1.87
TRIM8-204ENST00000487927 NMRK2Q9NPI5 230 aa26.75■■□□□ 1.87
TRIM8-204ENST00000487927 PDE6BP35913 854 aa26.74■■□□□ 1.87
TRIM8-204ENST00000487927 PRELPP51888 382 aa26.74■■□□□ 1.87
TRIM8-204ENST00000487927 CNBD1Q8NA66 436 aa26.74■■□□□ 1.87
TRIM8-204ENST00000487927 EIF4A1P60842 406 aaKnown RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms