RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 CABP4P57796 275 aa11.65□□□□□ -0.54
PRKCB-208ENST00000487674 RC3H1Q5TC82 1133 aaKnown RBP11.65□□□□□ -0.54
PRKCB-208ENST00000487674 C10orf71Q711Q0 1435 aa11.65□□□□□ -0.54
PRKCB-208ENST00000487674 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.55
PRKCB-208ENST00000487674 MTHFSP49914 203 aa11.64□□□□□ -0.55
PRKCB-208ENST00000487674 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
PRKCB-208ENST00000487674 TRAPPC3LQ5T215 181 aa11.64□□□□□ -0.55
PRKCB-208ENST00000487674 SULT6B1Q6IMI4 303 aa11.64□□□□□ -0.55
PRKCB-208ENST00000487674 MRC1P22897 1456 aa11.63□□□□□ -0.55
PRKCB-208ENST00000487674 VIRMAQ69YN4 1812 aaKnown RBP11.63□□□□□ -0.55
PRKCB-208ENST00000487674 RPS6KA4O75676 772 aa11.63□□□□□ -0.55
PRKCB-208ENST00000487674 IL13P35225 146 aa11.63□□□□□ -0.55
PRKCB-208ENST00000487674 NLGN1Q8N2Q7 840 aa11.63□□□□□ -0.55
PRKCB-208ENST00000487674 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
PRKCB-208ENST00000487674 N4BP2Q86UW6 1770 aaPredicted RBP11.63□□□□□ -0.55
PRKCB-208ENST00000487674 KIF7Q2M1P5 1343 aa11.62□□□□□ -0.55
PRKCB-208ENST00000487674 BRCA1P38398 1863 aaKnown RBP11.62□□□□□ -0.55
PRKCB-208ENST00000487674 ARHGEF1Q92888 912 aaKnown RBP11.62□□□□□ -0.55
PRKCB-208ENST00000487674 ADAMTS7Q9UKP4 1686 aa11.62□□□□□ -0.55
PRKCB-208ENST00000487674 PTCD1O75127 700 aaKnown RBP11.61□□□□□ -0.55
PRKCB-208ENST00000487674 POTEJP0CG39 1038 aa11.61□□□□□ -0.55
PRKCB-208ENST00000487674 GYS1P13807 737 aa11.61□□□□□ -0.55
PRKCB-208ENST00000487674 RFC4P35249 363 aa11.61□□□□□ -0.55
PRKCB-208ENST00000487674 NFATC2IPQ8NCF5 419 aa11.61□□□□□ -0.55
PRKCB-208ENST00000487674 GPBP1L1Q9HC44 474 aaPredicted RBP11.61□□□□□ -0.55
PRKCB-208ENST00000487674 WWC3Q9ULE0 1092 aa11.61□□□□□ -0.55
PRKCB-208ENST00000487674 CRKLP46109 303 aaKnown RBP11.6□□□□□ -0.55
PRKCB-208ENST00000487674 TGFB2P61812 414 aa11.6□□□□□ -0.55
PRKCB-208ENST00000487674 AKAP4Q5JQC9 854 aa11.6□□□□□ -0.55
PRKCB-208ENST00000487674 KIF12Q96FN5 646 aa11.6□□□□□ -0.55
PRKCB-208ENST00000487674 CCDC87Q9NVE4 849 aa11.6□□□□□ -0.55
PRKCB-208ENST00000487674 ARFGEF1Q9Y6D6 1849 aa11.59□□□□□ -0.55
PRKCB-208ENST00000487674 C7P10643 843 aa11.59□□□□□ -0.55
PRKCB-208ENST00000487674 MIER1Q8N108 512 aa11.59□□□□□ -0.55
PRKCB-208ENST00000487674 SLC39A7Q92504 469 aa11.59□□□□□ -0.55
PRKCB-208ENST00000487674 PARP3Q9Y6F1 533 aa11.59□□□□□ -0.55
PRKCB-208ENST00000487674 UBR2Q8IWV8 1755 aa11.59□□□□□ -0.55
PRKCB-208ENST00000487674 USP42Q9H9J4 1324 aaKnown RBP11.59□□□□□ -0.55
PRKCB-208ENST00000487674 SLC52A2Q9HAB3 445 aa11.58□□□□□ -0.56
PRKCB-208ENST00000487674 PLSCR2Q9NRY7 297 aa11.58□□□□□ -0.56
PRKCB-208ENST00000487674 KCPQ6ZWJ8 1503 aa11.58□□□□□ -0.56
PRKCB-208ENST00000487674 COL3A1P02461 1466 aaPredicted RBP11.57□□□□□ -0.56
PRKCB-208ENST00000487674 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
PRKCB-208ENST00000487674 PER1O15534 1290 aaPredicted RBP11.57□□□□□ -0.56
PRKCB-208ENST00000487674 ATN1P54259 1190 aaPredicted RBP11.57□□□□□ -0.56
PRKCB-208ENST00000487674 IFFO2Q5TF58 517 aa11.57□□□□□ -0.56
PRKCB-208ENST00000487674 ZNF526Q8TF50 670 aaPredicted RBP11.57□□□□□ -0.56
PRKCB-208ENST00000487674 BCS1LQ9Y276 419 aa11.57□□□□□ -0.56
PRKCB-208ENST00000487674 A0A0G2JLW4 131 aa11.56□□□□□ -0.56
PRKCB-208ENST00000487674 DIAPH1O60610 1272 aaKnown RBP11.56□□□□□ -0.56
PRKCB-208ENST00000487674 HMOX1P09601 288 aa11.56□□□□□ -0.56
PRKCB-208ENST00000487674 DPEP1P16444 411 aa11.56□□□□□ -0.56
PRKCB-208ENST00000487674 INTS5Q6P9B9 1019 aaKnown RBP11.56□□□□□ -0.56
PRKCB-208ENST00000487674 SRP68Q9UHB9 627 aaKnown RBP11.56□□□□□ -0.56
PRKCB-208ENST00000487674 RNMTO43148 476 aaKnown RBP11.55□□□□□ -0.56
PRKCB-208ENST00000487674 DDR1Q08345 913 aa11.55□□□□□ -0.56
PRKCB-208ENST00000487674 CC2D1BQ5T0F9 858 aaKnown RBP11.55□□□□□ -0.56
PRKCB-208ENST00000487674 DNAJC10Q8IXB1 793 aa11.55□□□□□ -0.56
PRKCB-208ENST00000487674 RASEFQ8IZ41 740 aa11.55□□□□□ -0.56
PRKCB-208ENST00000487674 LGR6Q9HBX8 967 aa11.55□□□□□ -0.56
PRKCB-208ENST00000487674 TRPC6Q9Y210 931 aa11.55□□□□□ -0.56
PRKCB-208ENST00000487674 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
PRKCB-208ENST00000487674 SIPA1L3O60292 1781 aaPredicted RBP11.54□□□□□ -0.56
PRKCB-208ENST00000487674 FCHSD2O94868 740 aa11.54□□□□□ -0.56
PRKCB-208ENST00000487674 MTHFSDQ2M296 383 aaKnown RBP11.54□□□□□ -0.56
PRKCB-208ENST00000487674 NRXN2Q9P2S2 1712 aa11.54□□□□□ -0.56
PRKCB-208ENST00000487674 COL15A1P39059 1388 aa11.54□□□□□ -0.56
PRKCB-208ENST00000487674 AFDNP55196 1824 aaKnown RBP11.53□□□□□ -0.56
PRKCB-208ENST00000487674 ZPR1O75312 459 aa11.53□□□□□ -0.56
PRKCB-208ENST00000487674 CYP19A1P11511 503 aaPredicted RBP11.53□□□□□ -0.56
PRKCB-208ENST00000487674 SLC39A6Q13433 755 aa11.53□□□□□ -0.56
PRKCB-208ENST00000487674 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
PRKCB-208ENST00000487674 DLEC1Q9Y238 1755 aa11.53□□□□□ -0.56
PRKCB-208ENST00000487674 POLRMTO00411 1230 aaKnown RBP11.52□□□□□ -0.57
PRKCB-208ENST00000487674 KIF3CO14782 793 aa11.52□□□□□ -0.57
PRKCB-208ENST00000487674 MAP3K13O43283 966 aa11.52□□□□□ -0.57
PRKCB-208ENST00000487674 HSPA6P17066 643 aa11.52□□□□□ -0.57
PRKCB-208ENST00000487674 KCNA3P22001 575 aa11.52□□□□□ -0.57
PRKCB-208ENST00000487674 ARHGAP27Q6ZUM4 889 aa11.52□□□□□ -0.57
PRKCB-208ENST00000487674 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
PRKCB-208ENST00000487674 PIM2Q9P1W9 311 aa11.52□□□□□ -0.57
PRKCB-208ENST00000487674 SCN7AQ01118 1682 aa11.52□□□□□ -0.57
PRKCB-208ENST00000487674 TM4SF1P30408 202 aa11.51□□□□□ -0.57
PRKCB-208ENST00000487674 DALRD3Q5D0E6 543 aaKnown RBP11.51□□□□□ -0.57
PRKCB-208ENST00000487674 USPL1Q5W0Q7 1092 aa11.51□□□□□ -0.57
PRKCB-208ENST00000487674 NARFQ9UHQ1 456 aa11.51□□□□□ -0.57
PRKCB-208ENST00000487674 ZBTB1Q9Y2K1 713 aa11.51□□□□□ -0.57
PRKCB-208ENST00000487674 CEP350Q5VT06 3117 aa11.5□□□□□ -0.57
PRKCB-208ENST00000487674 POTEMA6NI47 508 aa11.5□□□□□ -0.57
PRKCB-208ENST00000487674 U2SURPO15042 1029 aaKnown RBP11.5□□□□□ -0.57
PRKCB-208ENST00000487674 TTC5Q8N0Z6 440 aa11.5□□□□□ -0.57
PRKCB-208ENST00000487674 GAS2L2Q8NHY3 880 aa11.5□□□□□ -0.57
PRKCB-208ENST00000487674 CHRNA5P30532 468 aa11.49□□□□□ -0.57
PRKCB-208ENST00000487674 NFIXQ14938 502 aa11.49□□□□□ -0.57
PRKCB-208ENST00000487674 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
PRKCB-208ENST00000487674 SBF1O95248 1867 aa11.49□□□□□ -0.57
PRKCB-208ENST00000487674 POTEFA5A3E0 1075 aa11.48□□□□□ -0.57
PRKCB-208ENST00000487674 GNAT3A8MTJ3 354 aa11.48□□□□□ -0.57
PRKCB-208ENST00000487674 STARD3NLO95772 234 aa11.48□□□□□ -0.57
PRKCB-208ENST00000487674 TEFQ10587 303 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms